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Q9CAR6 (Q9CAR6_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified September 21, 2011. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:T17F3.14 EMBL AAG52558.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL AAG52558.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length826 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q9CAR6 [UniParc].

Last modified June 1, 2001. Version 1.
Checksum: D7625F9FAFAA0F48

FASTA82692,991
        10         20         30         40         50         60 
MSTVPIESLL HHSYLRHNSK VNRGNRSFIP ISLNLRSHFT SNKLLHSIGK SVGVSSMNKS 

        70         80         90        100        110        120 
PVAIRATSSD TAVVETAQSD DVIFKEIFPV QRIEKDYAIE TPLKKLSEGD SFFEVAINLN 

       130        140        150        160        170        180 
LESSVAALNF VLKDEETGAW YQHKGRDFKV PLVDDVPDNG NLIGAKKGFG ALGQLSNIPL 

       190        200        210        220        230        240 
KQDKSSAETD SIEERKGLQE FYEEMPISKR VADDNSVSVT ARKCPETSKN IVSIETDLPG 

       250        260        270        280        290        300 
DVTVHWGVCK NGTKKWEIPS EPYPEETSLF KNKALRTRLQ RKDDGNGSFG LFSLDGKLEG 

       310        320        330        340        350        360 
LCFVLKLNEN TWLNYRGEDF YVPFLTSSSS PVETEAAQVS KPKRKTDKEV SASGFTKEII 

       370        380        390        400        410        420 
TEIRNLAIDI SSHKNQKTNV KEVQENILQE IEKLAAEAYS IFRSTTPAFS EEGVLEAEAD 

       430        440        450        460        470        480 
KPDIKISSGT GSGFEILCQG FNWESNKSGR WYLELQEKAD ELASLGFTVL WLPPPTESVS 

       490        500        510        520        530        540 
PEGYMPKDLY NLNSRYGTID ELKDTVKKFH KVGIKVLGDA VLNHRCAHFK NQNGVWNLFG 

       550        560        570        580        590        600 
GRLNWDDRAV VADDPHFQGR GNKSSGDNFH AAPNIDHSQD FVRKDIKEWL CWMMEEVGYD 

       610        620        630        640        650        660 
GWRLDFVRGF WGGYVKDYMD ASKPYFAVGE YWDSLSYTYG EMDYNQDAHR QRIVDWINAT 

       670        680        690        700        710        720 
SGAAGAFDVT TKGILHTALQ KCEYWRLSDP KGKPPGVVGW WPSRAVTFIE NHDTGSTQGH 

       730        740        750        760        770        780 
WRFPEGKEMQ GYAYILTHPG TPAVFFDHIF SDYHSEIAAL LSLRNRQKLH CRSEVNIDKS 

       790        800        810        820 
ERDVYAAIID EKVAMKIGPG HYEPPNGSQN WSVAVEGRDY KVWETS 

« Hide

References

[1]"Arabidopsis thaliana chromosome 1 BAC T17F3 genomic sequence."
Lin X., Kaul S., Town C.D., Benito M., Creasy T.H., Haas B.J., Wu D., Maiti R., Ronning C.M., Koo H., Fujii C.Y., Utterback T.R., Barnstead M.E., Bowman C.L., White O., Nierman W.C., Fraser C.M.
Submitted (SEP-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]Town C.D., Kaul S.
Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC010675 Genomic DNA. Translation: AAG52558.1.
IPIIPI00545502.
PIRE96720.

3D structure databases

HSSPHSSP built from PDB template 1P6W based on UniProtKB P00693.
ProteinModelPortalQ9CAR6.
SMRQ9CAR6. Positions 434-825.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ9CAR6.

Protein family/group databases

CAZyCBM45. Carbohydrate-Binding Module Family 45.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

PhylomeDBQ9CAR6.

Gene expression databases

GenevestigatorQ9CAR6.

Family and domain databases

InterProIPR012850. A-amylase_bs_C.
IPR015902. Alpha_amylase.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHERPTHR10357. Alpha_amylase. 1 hit.
PfamPF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00810. Alpha-amyl_C2. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ9CAR6_ARATH
AccessionPrimary (citable) accession number: Q9CAR6
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: September 21, 2011
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)