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Q9CA75 (GT5_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative glycosyltransferase 5
Short name=AtGT5
EC=2.4.-.-
Gene names
Name:GT5
Ordered Locus Names:At1g74380
ORF Names:F1M20.6
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length457 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Golgi apparatus membrane; Single-pass type II membrane protein Potential.

Sequence similarities

Belongs to the glycosyltransferase 34 family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 457457Putative glycosyltransferase 5
PRO_0000215173

Regions

Topological domain1 – 5151Cytoplasmic Potential
Transmembrane52 – 7221Helical; Signal-anchor for type II membrane protein; Potential
Topological domain73 – 457385Lumenal Potential

Amino acid modifications

Glycosylation1161N-linked (GlcNAc...) Potential
Glycosylation4321N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
Q9CA75 [UniParc].

Last modified June 1, 2001. Version 1.
Checksum: A26B9818D963EA67

FASTA45751,728
        10         20         30         40         50         60 
MGQDGSPAHK RPSGSGGGLP TTTLTNGGGR GGRGGLLPRG RQMQKTFNNI KITILCGFVT 

        70         80         90        100        110        120 
ILVLRGTIGV GNLGSSSADA VNQNIIEETN RILAEIRSDS DPTDLDEPQE GDMNPNATYV 

       130        140        150        160        170        180 
LGPKITDWDS QRKVWLNQNP EFPSTVNGKA RILLLTGSPP KPCDNPIGDH YLLKSVKNKI 

       190        200        210        220        230        240 
DYCRLHGIEI VYNMAHLDKE LAGYWAKLPM IRRLMLSHPE VEWIWWMDSD ALFTDILFQI 

       250        260        270        280        290        300 
PLARYQKHNL VIHGYPDLLF DQKSWIALNT GSFLLRNCQW SLDLLDAWAP MGPKGPIRDE 

       310        320        330        340        350        360 
AGKVLTAYLK GRPAFEADDQ SALIYLLLSQ KDTWMEKVFV ENQYYLHGFW EGLVDRYEEM 

       370        380        390        400        410        420 
IEKYHPGLGD ERWPFVTHFV GCKPCGSYAD YAVERCLKSM ERAFNFADNQ VLKLYGFSHR 

       430        440        450 
GLLSPKIKRI RNETVSPLEF VDKFDIRRTP VETKPQN

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. expand/collapse author list , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[3]"Empirical analysis of transcriptional activity in the Arabidopsis genome."
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. expand/collapse author list , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Columbia.
[4]"An Arabidopsis gene encoding an alpha-xylosyltransferase involved in xyloglucan biosynthesis."
Faik A., Price N.J., Raikhel N.V., Keegstra K.
Proc. Natl. Acad. Sci. U.S.A. 99:7797-7802(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AC011765 Genomic DNA. Translation: AAG52374.1.
CP002684 Genomic DNA. Translation: AEE35584.1.
AY093175 mRNA. Translation: AAM13174.1.
BT009684 mRNA. Translation: AAP81802.1.
IPIIPI00533936.
PIRE96772.
RefSeqNP_177578.1. NM_106098.3.
UniGeneAt.35504.
At.43097.
At.67281.

3D structure databases

ProteinModelPortalQ9CA75.
SMRQ9CA75. Positions 150-279.
ModBaseSearch...

Protein-protein interaction databases

STRING3702.AT1G74380.1-P.

Protein family/group databases

CAZyGT34. Glycosyltransferase Family 34.

Proteomic databases

PaxDbQ9CA75.
PRIDEQ9CA75.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT1G74380.1; AT1G74380.1; AT1G74380.
GeneID843779.
KEGGath:AT1G74380.

Organism-specific databases

TAIRAt1g74380.

Phylogenomic databases

eggNOGNOG266323.
HOGENOMHOG000239436.
InParanoidQ9CA75.
KOK08238.
OMAEEMMENH.
PhylomeDBQ9CA75.
ProtClustDBPLN03182.

Enzyme and pathway databases

BioCycMetaCyc:AT1G74380-MONOMER.

Gene expression databases

GenevestigatorQ9CA75.
GermOnlineAT1G74380. Arabidopsis thaliana.

Family and domain databases

InterProIPR008630. Glyco_trans_34.
[Graphical view]
PfamPF05637. Glyco_transf_34. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameGT5_ARATH
AccessionPrimary (citable) accession number: Q9CA75
Entry history
Integrated into UniProtKB/Swiss-Prot: April 26, 2004
Last sequence update: June 1, 2001
Last modified: May 1, 2013
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents