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Q9C9Q5 (Q9C9Q5_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Nucleotide-diphospho-sugar transferase family protein EMBL AEE35673.1

Putative uncharacterized protein F9E10.4 EMBL AAG51917.1
Gene names
Name:F9E10.4 EMBL AAG51917.1
Synonyms:RRA2 EMBL AEE35673.1
Ordered Locus Names:At1g75110 TAIR At1g75110
ORF Names:AT1G75110 EMBL AEE35673.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL AAG51917.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length428 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Molecular functionTransferase EMBL AEE35673.1
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processroot hair cell development

Inferred from mutant phenotype. Source: TAIR

   Cellular componentendoplasmic reticulum

Inferred from electronic annotation. Source: InterPro

   Molecular functiontransferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9C9Q5 [UniParc].

Last modified June 1, 2001. Version 1.
Checksum: D67FFFC470477086

FASTA42848,169
        10         20         30         40         50         60 
MAGRRDRIQQ LRGSRIAIAI FVGILIGCVC SVLFPNGFFN SGSSLIANEE RISKSTSTDG 

        70         80         90        100        110        120 
LASCESSERV KMLKSDFSII SVKNAELRKQ VRELTEKVRL AEQETENARK QVLVLGSEIK 

       130        140        150        160        170        180 
AGPFGTVKSL RTNPTVVPDE SVNPRLAKLL EKVAVNKEII VVLANSNVKP MLELQIASVK 

       190        200        210        220        230        240 
RVGIQNYLIV ALDDSMESFC ESKEVVFYKR DPDKAVDMVG KSGGNHAVSG LKFRVLREFL 

       250        260        270        280        290        300 
QLGYSVLLSD VDIVFLQNPF SHLHRDSDVE SMSDGHDNNT AYGFNDVFDE PSMGWARYAH 

       310        320        330        340        350        360 
TMRIWVFNSG FFYLRPTIPS IDLLDRVADT LSKSEAWDQA VFNEQLFYPS HPGYTGLHAS 

       370        380        390        400        410        420 
KRVMDMYEFM NSKVLFKTVR KNQELKKLKP VIVHLNYHPD KLERMHAVVE FYVNGKQDAL 


DSFPDGSD 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. expand/collapse author list , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
Nature 408:816-820(2000) [PubMed: 11130712] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]"Arabidopsis ORF clones."
Shinn P., Chen H., Cheuk R., Kim C.J., Banh J., Bowser L., Carninci P., Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M. expand/collapse author list , Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[4]Town C.D., Kaul S.
Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]"Arabidopsis thaliana chromosome 1 BAC F9E10 genomic sequence."
Lin X., Kaul S., Town C.D., Benito M., Creasy T.H., Haas B.J., Wu D., Maiti R., Ronning C.M., Koo H., Fujii C.Y., Utterback T.R., Barnstead M.E., Bowman C.L., White O., Nierman W.C., Fraser C.M.
Submitted (NOV-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[6]"Arabidopsis cDNA clones."
Shinn P., Chen H., Cheuk R., Kim C.J., Koesema E., Meyers M.C., Tracy S.E., Banh J., Bowser L., Carninci P., Chung M.K., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J. expand/collapse author list , Lam B., Lee J.M., Lin J., Liu S.X., Miranda M., Narusaka M., Nguyen M., Palm C.J., Pham P.K., Quach H.L., Sakano H., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Yamada K., Yu G., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Submitted (JUN-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC013258 Genomic DNA. Translation: AAG51917.1.
AY039531 mRNA. Translation: AAK62587.1.
AY102148 mRNA. Translation: AAM26715.1.
CP002684 Genomic DNA. Translation: AEE35673.1.
IPIIPI00527154.
PIRB96781.
RefSeqNP_565102.1. NM_106167.2.
UniGeneAt.17941.

3D structure databases

ProteinModelPortalQ9C9Q5.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9C9Q5. 1 interaction.

Protein family/group databases

CAZyGT77. Glycosyltransferase Family 77.

Proteomic databases

PRIDEQ9C9Q5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT1G75110.1; AT1G75110.1; AT1G75110.
GeneID843848.
KEGGath:AT1G75110.
NMPDRfig|3702.1.peg.7028.

Organism-specific databases

TAIRAt1g75110.

Phylogenomic databases

GeneTreeEPGT00050000010769.
InParanoidQ9C9Q5.
OMASCESSER.
PhylomeDBQ9C9Q5.
ProtClustDBCLSN2682481.

Gene expression databases

GenevestigatorQ9C9Q5.

Family and domain databases

InterProIPR005069. Nucl-diP-sugar_transferase.
IPR003388. Reticulon.
[Graphical view]
PANTHERPTHR10994. Reticulon. 1 hit.
PfamPF03407. Nucleotid_trans. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9C9Q5_ARATH
AccessionPrimary (citable) accession number: Q9C9Q5
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: January 25, 2012
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)