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Q9C975 (Q9C975_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

At1g80290 EMBL ABD59059.1

Nucleotide-diphospho-sugar transferase EMBL AEE36383.1

Putative uncharacterized protein F5I6.4 EMBL AAG52433.1
Gene names
Name:F5I6.4 EMBL AAG52433.1
Ordered Locus Names:At1g80290 TAIR At1g80290
ORF Names:AT1G80290 EMBL AEE36383.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL AAG52433.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length329 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q9C975 [UniParc].

Last modified June 1, 2001. Version 1.
Checksum: 60FED6ABA9F83B76

FASTA32937,703
        10         20         30         40         50         60 
MGVKSVRFSI WFLFVVTDLV FCRTLSGDPD PCDATNQREF QKLRSDQITV LINGYSEYRI 

        70         80         90        100        110        120 
PLLQTIVASY SSSSIVSSIL VLWGNPSTPD QLLDQLYQNL TQYSPGSASI SLIQQSSSSL 

       130        140        150        160        170        180 
NARFLPRSSV DTRAVLICDD DVEIDQRSLE FAFSVWKSNP DRLVGTFVRS HGFDLQGKEW 

       190        200        210        220        230        240 
IYTVHPDKYS IVLTKFMMMK QDYLFEYSCK GGVEMEEMRM IVDQMRNCED ILMNFVAADR 

       250        260        270        280        290        300 
LRAGPIMVGA ERVRDWGDAR NEEVEERVRD VGLSSRRVEH RKRRGNCIRE FHRVMGKMPL 

       310        320 
MYSYGKVVNS VGEQGLCRKA GKLVFCDRD 

« Hide

References

« Hide 'large scale' references
[1]"Analysis of multiple occurrences of alternative splicing events in Arabidopsis thaliana using novel sequenced full-length cDNAs."
Iida K., Fukami-Kobayashi K., Toyoda A., Sakaki Y., Kobayashi M., Seki M., Shinozaki K.
DNA Res. 0:0-0(2009)
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. expand/collapse author list , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
Nature 408:816-820(2000) [PubMed: 11130712] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[3]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[4]"Arabidopsis ORF clones."
Shinn P., Chen H., Kim C.J., Ecker J.R.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]Town C.D., Kaul S.
Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[6]"Arabidopsis thaliana chromosome 1 BAC F5I6 genomic sequence."
Lin X., Kaul S., Town C.D., Benito M., Creasy T.H., Haas B.J., Wu D., Maiti R., Ronning C.M., Koo H., Fujii C.Y., Utterback T.R., Barnstead M.E., Bowman C.L., White O., Nierman W.C., Fraser C.M.
Submitted (DEC-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC018848 Genomic DNA. Translation: AAG52433.1.
BT024721 mRNA. Translation: ABD59059.1.
CP002684 Genomic DNA. Translation: AEE36383.1.
AK317465 mRNA. Translation: BAH20131.1.
IPIIPI00524018.
PIRD96834.
RefSeqNP_565236.1. NM_106678.2.
UniGeneAt.48402.

3D structure databases

ProteinModelPortalQ9C975.
SMRQ9C975. Positions 45-307.
ModBaseSearch...

Protein family/group databases

CAZyGT64. Glycosyltransferase Family 64.

Proteomic databases

PRIDEQ9C975.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT1G80290.1; AT1G80290.1; AT1G80290.
GeneID844369.
GenomeReviewsGene locus AT1G80290 in contig CT485782_GR.
KEGGath:AT1G80290.
NMPDRfig|3702.1.peg.7616.

Organism-specific databases

TAIRAt1g80290.

Phylogenomic databases

GeneTreeEPGT00070000032452.
HOGENOMHBG601343.
InParanoidQ9C975.
OMAICDDDVE.
PhylomeDBQ9C975.
ProtClustDBCLSN2689351.

Gene expression databases

GenevestigatorQ9C975.

Family and domain databases

InterProIPR015338. HexNAc_Trfase_a.
[Graphical view]
PfamPF09258. Glyco_transf_64. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9C975_ARATH
AccessionPrimary (citable) accession number: Q9C975
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: January 25, 2012
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)