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Protein
Submitted name:

AGAMOUS-like 55

Gene

AGAMOUS-like 55

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
AGAMOUS-like 55Imported
Submitted name:
Putative uncharacterized protein T7P1.6Imported
Gene namesi
Name:AGAMOUS-like 55Imported
Synonyms:AGL55Imported
Ordered Locus Names:At1g60920Imported
ORF Names:T7P1.6Imported, T7P1_6Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G60920.
TAIRilocus:2206016. AT1G60920.

Subcellular locationi

  • Nucleus PROSITE-ProRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

IntActiQ9C960. 6 interactors.
STRINGi3702.AT1G60920.1.

Structurei

3D structure databases

SMRiQ9C960.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 40MADS-boxInterPro annotationAdd BLAST38

Phylogenomic databases

eggNOGiKOG0014. Eukaryota.
COG5068. LUCA.
HOGENOMiHOG000152226.
OMAiNSHAAFY.
OrthoDBiEOG093617IN.

Family and domain databases

CDDicd00266. MADS_SRF_like. 1 hit.
Gene3Di3.40.1810.10. 1 hit.
InterProiView protein in InterPro
IPR033897. MADS_SRF-like.
IPR002100. TF_MADSbox.
PfamiView protein in Pfam
PF00319. SRF-TF. 1 hit.
PRINTSiPR00404. MADSDOMAIN.
SMARTiView protein in SMART
SM00432. MADS. 1 hit.
SUPFAMiSSF55455. SSF55455. 1 hit.
PROSITEiView protein in PROSITE
PS50066. MADS_BOX_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9C960-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGGTKRKIEM KRIEDKNVRA VAFTKRKSGL FHKASELCLL SPGTQIAILA
60 70 80 90 100
TPLSSHSHAS FYSFGHSSVD HVVSSLLHNQ HPSLPTNQDN RSGLGFWWED
110 120 130 140 150
QAFDRLENVD ELKEAVDAVS RMLNNVRLRL DDAVKSNQRD GSLVIHQEDE
160 170 180 190
EVLQLGYKDT NQITKLEGET SASASLLKNV VDNLHIDDRY Y
Length:191
Mass (Da):21,501
Last modified:June 1, 2001 - v1
Checksum:iBF92CEBA222421D1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC018908 Genomic DNA. Translation: AAG51643.1.
CP002684 Genomic DNA. Translation: AEE33748.1.
PIRiF96634.
RefSeqiNP_176288.1. NM_104772.2.
UniGeneiAt.64874.

Genome annotation databases

EnsemblPlantsiAT1G60920.1; AT1G60920.1; AT1G60920.
GeneIDi842383.
GrameneiAT1G60920.1; AT1G60920.1; AT1G60920.
KEGGiath:AT1G60920.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ9C960_ARATH
AccessioniPrimary (citable) accession number: Q9C960
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: July 5, 2017
This is version 120 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported