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Q9C8K1

- BGL36_ARATH

UniProt

Q9C8K1 - BGL36_ARATH

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Protein

Putative myrosinase 6

Gene

TGG6

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5- Protein uncertaini

Functioni

Catalytic activityi

A thioglucoside + H2O = a sugar + a thiol.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei39 – 391SubstrateBy similarity
Binding sitei140 – 1401SubstrateBy similarity
Binding sitei184 – 1841SubstrateBy similarity
Binding sitei185 – 1851AscorbateBy similarity
Binding sitei254 – 2541AscorbateBy similarity
Binding sitei321 – 3211SubstrateBy similarity
Binding sitei440 – 4401SubstrateBy similarity

GO - Molecular functioni

  1. thioglucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. response to salt stress Source: TAIR
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Enzyme and pathway databases

BioCyciARA:AT1G51490-MONOMER.

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative myrosinase 6 (EC:3.2.1.147)
Alternative name(s):
Beta-glucosidase 36
Short name:
AtBGLU36
Sinigrinase 6
Thioglucosidase 6
Gene namesi
Name:TGG6
Synonyms:BGLU36
Ordered Locus Names:At1g51490
ORF Names:F5D21.16
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 1

Organism-specific databases

TAIRiAT1G51490.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 484484Putative myrosinase 6PRO_0000389598Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi28 – 281N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi204 ↔ 207By similarity
Glycosylationi260 – 2601N-linked (GlcNAc...)Sequence Analysis
Glycosylationi462 – 4621N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PaxDbiQ9C8K1.
PRIDEiQ9C8K1.

Expressioni

Gene expression databases

ExpressionAtlasiQ9C8K1. differential.
GenevestigatoriQ9C8K1.

Structurei

3D structure databases

ProteinModelPortaliQ9C8K1.
SMRiQ9C8K1. Positions 27-484.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni447 – 4482Substrate bindingBy similarity

Sequence similaritiesi

Belongs to the glycosyl hydrolase 1 family.Curated

Phylogenomic databases

eggNOGiCOG2723.
HOGENOMiHOG000088630.
InParanoidiQ9C8K1.
KOiK01237.
OMAiYIVGHHE.
PhylomeDBiQ9C8K1.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9C8K1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MQSRMQGQRT LQLRQNSCIQ PKWISQKNFT FGAATSAYQV EGAAHRALNG
60 70 80 90 100
WDYFTHRYPE RVSDRSIGDL ACNSYDLYKD DVKLLKRMNV QAYRFSIAWS
110 120 130 140 150
RVLPKGRLIG GVDENGITYY NNLINELKAN GIEPFVTIFH WDVPQDFRRR
160 170 180 190 200
IWRLLKPTYS DFKNYAELLF QRFGDRVKFW ITLNQPYSLA VKGYGDGQYP
210 220 230 240 250
PGRCTDCEFG GDSGTEPYIV GHHELLAHME AVSLYRKRYQ KFQGGKIGTT
260 270 280 290 300
LIGRWFIPLN ETNDLDKAAA KREFDFSVLG STGVRTISKD NERLGDRLPK
310 320 330 340 350
FTPKQSALLK GSLDFLGLNY YVTRYATYRP PPMPTQHSVL TDSGVTIGFE
360 370 380 390 400
RNGVSIGVKA SINFDVKDLR HLVDFFLFVE LLLLSTRIPS DSKSHQKQEL
410 420 430 440 450
LMLIANALAD NGRIQFQCSH LSCLKCAIED GCNVAGYFAW SLMDNYEFGN
460 470 480
GYTLRFDMNW VNFTNPADRR EKASGKWFSR FIAK
Length:484
Mass (Da):55,527
Last modified:November 24, 2009 - v2
Checksum:i0ACA3B6F3225154D
GO

Sequence cautioni

The sequence AAG52622.1 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC024261 Genomic DNA. Translation: AAG52622.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE32673.1.
PIRiC96553.
RefSeqiNP_175560.2. NM_104027.2.
UniGeneiAt.52136.

Genome annotation databases

EnsemblPlantsiAT1G51490.1; AT1G51490.1; AT1G51490.
GeneIDi841574.
KEGGiath:AT1G51490.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC024261 Genomic DNA. Translation: AAG52622.1 . Sequence problems.
CP002684 Genomic DNA. Translation: AEE32673.1 .
PIRi C96553.
RefSeqi NP_175560.2. NM_104027.2.
UniGenei At.52136.

3D structure databases

ProteinModelPortali Q9C8K1.
SMRi Q9C8K1. Positions 27-484.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH1. Glycoside Hydrolase Family 1.

Proteomic databases

PaxDbi Q9C8K1.
PRIDEi Q9C8K1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT1G51490.1 ; AT1G51490.1 ; AT1G51490 .
GeneIDi 841574.
KEGGi ath:AT1G51490.

Organism-specific databases

TAIRi AT1G51490.

Phylogenomic databases

eggNOGi COG2723.
HOGENOMi HOG000088630.
InParanoidi Q9C8K1.
KOi K01237.
OMAi YIVGHHE.
PhylomeDBi Q9C8K1.

Enzyme and pathway databases

BioCyci ARA:AT1G51490-MONOMER.

Gene expression databases

ExpressionAtlasi Q9C8K1. differential.
Genevestigatori Q9C8K1.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10353. PTHR10353. 1 hit.
Pfami PF00232. Glyco_hydro_1. 1 hit.
[Graphical view ]
PRINTSi PR00131. GLHYDRLASE1.
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiBGL36_ARATH
AccessioniPrimary (citable) accession number: Q9C8K1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 24, 2009
Last sequence update: November 24, 2009
Last modified: October 29, 2014
This is version 71 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3