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Q9C8K1 (BGL36_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative myrosinase 6

EC=3.2.1.147
Alternative name(s):
Beta-glucosidase 36
Short name=AtBGLU36
Sinigrinase 6
Thioglucosidase 6
Gene names
Name:TGG6
Synonyms:BGLU36
Ordered Locus Names:At1g51490
ORF Names:F5D21.16
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length484 AA.
Sequence statusComplete.
Protein existenceUncertain

General annotation (Comments)

Catalytic activity

A thioglucoside + H2O = a sugar + a thiol.

Sequence similarities

Belongs to the glycosyl hydrolase 1 family.

Caution

Could be the product of a pseudogene.

Sequence caution

The sequence AAG52622.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 484484Putative myrosinase 6
PRO_0000389598

Regions

Region447 – 4482Substrate binding By similarity

Sites

Binding site391Substrate By similarity
Binding site1401Substrate By similarity
Binding site1841Substrate By similarity
Binding site1851Ascorbate By similarity
Binding site2541Ascorbate By similarity
Binding site3211Substrate By similarity
Binding site4401Substrate By similarity

Amino acid modifications

Glycosylation281N-linked (GlcNAc...) Potential
Glycosylation2601N-linked (GlcNAc...) Potential
Glycosylation4621N-linked (GlcNAc...) Potential
Disulfide bond204 ↔ 207 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q9C8K1 [UniParc].

Last modified November 24, 2009. Version 2.
Checksum: 0ACA3B6F3225154D

FASTA48455,527
        10         20         30         40         50         60 
MQSRMQGQRT LQLRQNSCIQ PKWISQKNFT FGAATSAYQV EGAAHRALNG WDYFTHRYPE 

        70         80         90        100        110        120 
RVSDRSIGDL ACNSYDLYKD DVKLLKRMNV QAYRFSIAWS RVLPKGRLIG GVDENGITYY 

       130        140        150        160        170        180 
NNLINELKAN GIEPFVTIFH WDVPQDFRRR IWRLLKPTYS DFKNYAELLF QRFGDRVKFW 

       190        200        210        220        230        240 
ITLNQPYSLA VKGYGDGQYP PGRCTDCEFG GDSGTEPYIV GHHELLAHME AVSLYRKRYQ 

       250        260        270        280        290        300 
KFQGGKIGTT LIGRWFIPLN ETNDLDKAAA KREFDFSVLG STGVRTISKD NERLGDRLPK 

       310        320        330        340        350        360 
FTPKQSALLK GSLDFLGLNY YVTRYATYRP PPMPTQHSVL TDSGVTIGFE RNGVSIGVKA 

       370        380        390        400        410        420 
SINFDVKDLR HLVDFFLFVE LLLLSTRIPS DSKSHQKQEL LMLIANALAD NGRIQFQCSH 

       430        440        450        460        470        480 
LSCLKCAIED GCNVAGYFAW SLMDNYEFGN GYTLRFDMNW VNFTNPADRR EKASGKWFSR 


FIAK 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. expand/collapse author list , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[3]"Functional genomic analysis of Arabidopsis thaliana glycoside hydrolase family 1."
Xu Z., Escamilla-Trevino L.L., Zeng L., Lalgondar M., Bevan D.R., Winkel B.S.J., Mohamed A., Cheng C.-L., Shih M.-C., Poulton J.E., Esen A.
Plant Mol. Biol. 55:343-367(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC024261 Genomic DNA. Translation: AAG52622.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE32673.1.
PIRC96553.
RefSeqNP_175560.2. NM_104027.2.
UniGeneAt.52136.

3D structure databases

ProteinModelPortalQ9C8K1.
SMRQ9C8K1. Positions 27-484.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

CAZyGH1. Glycoside Hydrolase Family 1.

Proteomic databases

PaxDbQ9C8K1.
PRIDEQ9C8K1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT1G51490.1; AT1G51490.1; AT1G51490.
GeneID841574.
KEGGath:AT1G51490.

Organism-specific databases

TAIRAT1G51490.

Phylogenomic databases

eggNOGCOG2723.
HOGENOMHOG000088630.
InParanoidQ9C8K1.
KOK01237.
OMAYIVGHHE.
PhylomeDBQ9C8K1.

Enzyme and pathway databases

BioCycARA:AT1G51490-MONOMER.

Gene expression databases

GenevestigatorQ9C8K1.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameBGL36_ARATH
AccessionPrimary (citable) accession number: Q9C8K1
Entry history
Integrated into UniProtKB/Swiss-Prot: November 24, 2009
Last sequence update: November 24, 2009
Last modified: May 14, 2014
This is version 69 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names