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Reviewed, UniProtKB/Swiss-Prot Q9C8H1 (AB11C_ARATH)

Last modified October 13, 2009. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    ABC transporter C family member 11
      Short name=ABC transporter ABCC.11
      Short name=AtABCC11
    EC=3.6.3.44
Alternative name(s):
    Multidrug resistance-associated protein 12
    Glutathione S-conjugate-transporting ATPase 12
    ATP-energized glutathione S-conjugate pump 12
Gene names
Name: ABCC11
Synonyms: MRP11, MRP12
Ordered Locus Names: At1g30420
ORF Names: F26G16.1, T4K22.1
OrganismArabidopsis thaliana (Mouse-ear cress) [Complete proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidseurosids IIBrassicalesBrassicaceaeArabidopsis

Protein attributes

Sequence length1495 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Function

Pump for glutathione S-conjugates By similarity.

Catalytic activity

ATP + H2O + xenobiotic(In) = ADP + phosphate + xenobiotic(Out).

Subcellular location

Membrane; Multi-pass membrane protein Potential.

Tissue specificity

Ubiquitous. Ref.4

Sequence similarities

Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily. [View classification]

Contains 2 ABC transmembrane type-1 domains.

Contains 2 ABC transporter domains.

Sequence caution

The sequence AAF19743.1 differs from that shown. Reason: Erroneous gene model prediction.

The sequence AAG51094.1 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   Biological processTransport
   Cellular componentMembrane
   DomainRepeat
Transmembrane
   LigandATP-binding
Nucleotide-binding
   Molecular functionHydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processtransport

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

xenobiotic-transporting ATPase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 14951495ABC transporter C family member 11
PRO_0000226083

Regions

Transmembrane32 – 5221 Potential
Transmembrane76 – 9621 Potential
Transmembrane110 – 13021 Potential
Transmembrane146 – 16621 Potential
Transmembrane182 – 20221 Potential
Transmembrane337 – 35721 Potential
Transmembrane420 – 44021 Potential
Transmembrane441 – 46121 Potential
Transmembrane528 – 54821 Potential
Transmembrane907 – 92721 Potential
Transmembrane949 – 96921 Potential
Transmembrane1042 – 106221 Potential
Transmembrane1142 – 116221 Potential
Transmembrane1166 – 118621 Potential
Domain303 – 583281ABC transmembrane type-1 1
Domain615 – 839225ABC transporter 1
Domain914 – 1198285ABC transmembrane type-1 2
Domain1235 – 1469235ABC transporter 2
Nucleotide binding650 – 6578ATP 1 Potential
Nucleotide binding1269 – 12768ATP 2 Potential

Sequences

Sequence LengthMass (Da)Tools
Q9C8H1-1 [UniParc].

Last modified March 7, 2006. Version 2.
Checksum: 9318F5DC045C35F2

FASTA1,495168,104
        10         20         30         40         50         60 
MGFEALNWYC KPIAEGFWEK TPDGAFGAYT PCAIDSLVMI VSNSVLLGLC FYRIWITLYN 

        70         80         90        100        110        120 
AKAQIYVLRK MYYHCVLWIL ACCCVVEPVL RLVMGISLFD MGDETDLPPF EVASLMVEAF 

       130        140        150        160        170        180 
AWFAMLVLIG LETKQYVKEF RWYVRFGVVY VLVADAVLLD LVLPLKNSIN RTALYLCISS 

       190        200        210        220        230        240 
RCCQALFGIL LLVYIPELDL YPDYHILNNE SLDNVEYDAL PGGVNICPER YASIFSGIYF 

       250        260        270        280        290        300 
SWMTPLMQLG YRKPITERDV WQLDQWDQTE TLIKRFQRCW TEESRRPKPW LLRALNNSLG 

       310        320        330        340        350        360 
RRFWLGGIFK VGHDLSQFVG PVILSHILQS MIEGDPAWVG YVYAFLIFFG VTFGVLCQSQ 

       370        380        390        400        410        420 
YFQHVGRVGF RLRSTLVAAI FHKSLRLTNK ARKNFASGKV TNMITTDANA LQLIAEQLHG 

       430        440        450        460        470        480 
LWSAPFRIIV SMVLLYQQLG VASIFGSLIL FLLIPFQTLI VRKMRKLTKE GLQWTDKRVG 

       490        500        510        520        530        540 
IIYEILASMD IVKCYAWEKS FESRIQGIRN EELSWFRKAQ LLSAFNSFIL NSTPVVVTLV 

       550        560        570        580        590        600 
SFGVYVLLGG DLTPARAFTS LSLFAVLRSP LSTLPNLISQ AVNANVSLQR IEELLLSEER 

       610        620        630        640        650        660 
ILAQNPPLQP GAPAISIKNG YFSWDSKTSK PTLSDINLEI PVGSLVAIVG GTGEGKTSLI 

       670        680        690        700        710        720 
SAMLGELSHA ETSSVDIRGS VAYVPQVSWI FNATLRENIL FGSDFESERY WRAIDVTALQ 

       730        740        750        760        770        780 
HDLDLFPGRD RTEIGERGVN ISGGQKQRVS MARAVYSNSD IYIFDDPFSA LDAHVAHQVF 

       790        800        810        820        830        840 
DSCVKHELKG KTRVLVTNQL HFLPLMDRII LVSEGMIKEE GNFAELSKSG TLFKKLMENA 

       850        860        870        880        890        900 
GKMDATQEVN TNDENISKLG PTVTIDVSER SLGSIQQGKW GRSMLVKQEE RETGIISWDV 

       910        920        930        940        950        960 
VMRYNKAVGG LWVVMILLVC YLTTEVLRVL SSTWLSIWTD QSTPKSYSPG FYIVVYALLG 

       970        980        990       1000       1010       1020 
FGQVAVTFTN SFWLISSSLH AAKRLHDAML NSILRAPMLF FETNPTGRVI NRFSKDIGDI 

      1030       1040       1050       1060       1070       1080 
DRNVANLMNM FMNQLWQLLS TFALIGIVST ISLWAIMPLL ILFYATYIYY QSTSREVRRL 

      1090       1100       1110       1120       1130       1140 
DSVTRSPIYA LFGEALNGLS SIRAYKAYDR MAKINGKSMD NNIRFTLAST SSNRWLTIRS 

      1150       1160       1170       1180       1190       1200 
ESLGGVMIWL TATFAVLRYG NAENQAVFAS TMGLLLSYTL NITTLLSGVL RQASKAENSL 

      1210       1220       1230       1240       1250       1260 
NSVERVGNYI DLPSEATAII ENNRPVSGWP SRGSIQFEDV HLRYRPGLPP VLHGLSFFVY 

      1270       1280       1290       1300       1310       1320 
PSEKVGVVGR TGAGKSSMLN ALYRIVELEK GRILIDDYDV AKFGLTDLRR VLSIIPQSPV 

      1330       1340       1350       1360       1370       1380 
LFSGTVRFNI DPFSEHNDAD LWEALERAHI KDVIDRNPFG LDAEVSEGGE NFSVGQRQLL 

      1390       1400       1410       1420       1430       1440 
SLARALLRRS KILFLDEATA SVDVRTDSLI QRTIREEFKS CTMLIIAHRL NTIIDCDKIL 

      1450       1460       1470       1480       1490 
VLSSGQVLEY DSPQELLSRD TSAFFKMVHS TGPENGQYLS NLVFERRGNG MSQGG 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. expand/collapse author list , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
Nature 408:816-820(2000) [PubMed: 11130712] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]"The Arabidopsis thaliana ABC protein superfamily, a complete inventory."
Sanchez-Fernandez R., Davies T.G., Coleman J.O., Rea P.A.
J. Biol. Chem. 276:30231-30244(2001) [PubMed: 11346655] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.
[3]"Multifunctionality of plant ABC transporters -- more than just detoxifiers."
Martinoia E., Klein M., Geisler M., Bovet L., Forestier C., Kolukisaoglu H.U., Mueller-Roeber B., Schulz B.
Planta 214:345-355(2002) [PubMed: 11855639] [Abstract]
Cited for: GENE FAMILY.
[4]"Family business: the multidrug-resistance related protein (MRP) ABC transporter genes in Arabidopsis thaliana."
Kolukisaoglu U.H., Bovet L., Klein M., Eggmann T., Geisler M., Wanke D., Martinoia E., Schulz B.
Planta 216:107-119(2002) [PubMed: 12430019] [Abstract]
Cited for: TISSUE SPECIFICITY.
[5]"Plant ABC proteins - a unified nomenclature and updated inventory."
Verrier P.J., Bird D., Burla B., Dassa E., Forestier C., Geisler M., Klein M., Kolukisaoglu H.U., Lee Y., Martinoia E., Murphy A., Rea P.A., Samuels L., Schulz B., Spalding E.J., Yazaki K., Theodoulou F.L.
Trends Plant Sci. 13:151-159(2008) [PubMed: 18299247] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.
+Additional computationally mapped references.

Cross-references

Sequence databases

AC009917 Genomic DNA. Translation: AAF19743.1. Sequence problems.
AC025295 Genomic DNA. Translation: AAG51094.1. Sequence problems.
IPIIPI00535365.
PIRF86428.
RefSeqNP_174331.2.
UniGeneAt.51838

3D structure databases

HSSPHSSP built from PDB template 1R0Z based on UniProtKB P26361.
ModBaseSearch...

Genome annotation databases

GeneID839922.
GenomeReviewsGene locus AT1G30420 in contig CT485782_GR.
KEGGath:AT1G30420.

Organism-specific databases

TAIRAt1g30420.

Enzyme and pathway databases

BRENDA3.6.3.44. 302.

Gene expression databases

GenevestigatorQ9C8H1.
GermOnlineAT1G30420. Arabidopsis thaliana.

Family and domain databases

InterProIPR001140. ABC_TM_transpt.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR017940. ABC_transporter_type1.
IPR003593. ATPase_AAA+_core.
[Graphical view]
PfamPF00664. ABC_membrane. 2 hits.
PF00005. ABC_tran. 2 hits.
[Graphical view]
ProDomPD000006. ABC_transporter. 2 hits.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00382. AAA. 2 hits.
[Graphical view]
PROSITEPS50929. ABC_TM1F. 2 hits.
PS00211. ABC_TRANSPORTER_1. 2 hits.
PS50893. ABC_TRANSPORTER_2. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameAB11C_ARATH
AccessionPrimary (citable) accession number: Q9C8H1
Secondary accession number(s): Q9S9R0
Entry history
Integrated into UniProtKB/Swiss-Prot: March 7, 2006
Last sequence update: March 7, 2006
Last modified: October 13, 2009
This is version 64 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectPPAP (Plant Proteome Annotation Project)

Relevant documents

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents