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Q9C7U5

- E132_ARATH

UniProt

Q9C7U5 - E132_ARATH

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Protein
Glucan endo-1,3-beta-glucosidase 2
Gene
At1g66250, T6J19.7
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at protein leveli

Functioni

Catalytic activityi

Hydrolysis of (1->3)-beta-D-glucosidic linkages in (1->3)-beta-D-glucans.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei272 – 2721Nucleophile By similarity
Active sitei334 – 3341Proton donor By similarity

GO - Molecular functioni

  1. glucan endo-1,3-beta-D-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. defense response Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Keywords - Biological processi

Plant defense

Enzyme and pathway databases

BioCyciARA:AT1G66250-MONOMER.

Protein family/group databases

CAZyiCBM43. Carbohydrate-Binding Module Family 43.
GH17. Glycoside Hydrolase Family 17.

Names & Taxonomyi

Protein namesi
Recommended name:
Glucan endo-1,3-beta-glucosidase 2 (EC:3.2.1.39)
Alternative name(s):
(1->3)-beta-glucan endohydrolase 2
Short name:
(1->3)-beta-glucanase 2
Beta-1,3-endoglucanase 2
Short name:
Beta-1,3-glucanase 2
Gene namesi
Ordered Locus Names:At1g66250
ORF Names:T6J19.7
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 1

Organism-specific databases

TAIRiAT1G66250.

Subcellular locationi

GO - Cellular componenti

  1. anchored component of membrane Source: TAIR
  2. anchored component of plasma membrane Source: TAIR
  3. plasma membrane Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020 Reviewed prediction
Add
BLAST
Chaini21 – 477457Glucan endo-1,3-beta-glucosidase 2
PRO_0000252330Add
BLAST
Propeptidei478 – 50528Removed in mature form Reviewed prediction
PRO_0000252331Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi97 – 971N-linked (GlcNAc...) Reviewed prediction
Glycosylationi180 – 1801N-linked (GlcNAc...) Reviewed prediction
Glycosylationi262 – 2621N-linked (GlcNAc...) Reviewed prediction
Glycosylationi304 – 3041N-linked (GlcNAc...) Reviewed prediction
Glycosylationi361 – 3611N-linked (GlcNAc...) Reviewed prediction
Glycosylationi365 – 3651N-linked (GlcNAc...) Reviewed prediction
Disulfide bondi369 ↔ 432 By similarity
Glycosylationi461 – 4611N-linked (GlcNAc...) Reviewed prediction
Glycosylationi466 – 4661N-linked (GlcNAc...) Reviewed prediction
Glycosylationi473 – 4731N-linked (GlcNAc...) Reviewed prediction
Lipidationi477 – 4771GPI-anchor amidated serine Reviewed prediction

Post-translational modificationi

Contains two additional disulfide bonds By similarity.

Keywords - PTMi

Disulfide bond, Glycoprotein, GPI-anchor, Lipoprotein

Proteomic databases

PaxDbiQ9C7U5.
PRIDEiQ9C7U5.

Expressioni

Gene expression databases

ArrayExpressiQ9C7U5.
GenevestigatoriQ9C7U5.

Structurei

3D structure databases

ProteinModelPortaliQ9C7U5.
SMRiQ9C7U5. Positions 32-348, 367-452.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiNOG290245.
HOGENOMiHOG000238220.
InParanoidiQ9C7U5.
OMAiSHGTCVF.
PhylomeDBiQ9C7U5.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012946. X8.
[Graphical view]
PfamiPF00332. Glyco_hydro_17. 1 hit.
PF07983. X8. 1 hit.
[Graphical view]
SMARTiSM00768. X8. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00587. GLYCOSYL_HYDROL_F17. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9C7U5-1 [UniParc]FASTAAdd to Basket

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MASLLHLLLL SLSLLVLASA SPSPPADEGS YIGVNIGTDL SDMPHPTQVV    50
ALLKAQEIRH IRLYNADPGL LIALANTGIK VIISIPNDQL LGIGQSNSTA 100
ANWVKRNVIA HYPATMITAV SVGSEVLTSL SNAAPVLVSA IKNVHAALLS 150
ANLDKLIKVS TPLSTSLILD PFPPSQAFFN RSLNAVIVPL LSFLQSTNSY 200
LMVNVYPYID YMQSNGVIPL DYALFKPIPP NKEAVDANTL VRYSNAFDAM 250
VDATYFAMAF LNFTNIPVLV TESGWPSKGE TNEPDATLDN ANTYNSNLIR 300
HVLNKTGTPK RPGIAVSTYI YELYNEDTKA GLSEKNWGLF NANGEPVYVL 350
RLTNSGSVLA NDTTNQTYCT AREGADTKML QAALDWACGP GKIDCSPIKQ 400
GETCYEPDNV VAHANYAFDT YYHQTGNNPD ACNFNGVASI TTTDPSHGTC 450
VFAGSRGNGR NGTSVNITAP SANSTTSSGI RSDLYYSRGI WSILTVMILN 500
VANIL 505
Length:505
Mass (Da):54,206
Last modified:October 3, 2006 - v2
Checksum:i1A1CC342B307F29F
GO

Sequence cautioni

The sequence AAG51762.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC066691 Genomic DNA. Translation: AAG51762.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE34485.1.
BX814184 mRNA. No translation available.
PIRiE96687.
RefSeqiNP_176799.2. NM_105296.2.
UniGeneiAt.49486.

Genome annotation databases

EnsemblPlantsiAT1G66250.1; AT1G66250.1; AT1G66250.
GeneIDi842942.
KEGGiath:AT1G66250.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC066691 Genomic DNA. Translation: AAG51762.1 . Sequence problems.
CP002684 Genomic DNA. Translation: AEE34485.1 .
BX814184 mRNA. No translation available.
PIRi E96687.
RefSeqi NP_176799.2. NM_105296.2.
UniGenei At.49486.

3D structure databases

ProteinModelPortali Q9C7U5.
SMRi Q9C7U5. Positions 32-348, 367-452.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi CBM43. Carbohydrate-Binding Module Family 43.
GH17. Glycoside Hydrolase Family 17.

Proteomic databases

PaxDbi Q9C7U5.
PRIDEi Q9C7U5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT1G66250.1 ; AT1G66250.1 ; AT1G66250 .
GeneIDi 842942.
KEGGi ath:AT1G66250.

Organism-specific databases

TAIRi AT1G66250.

Phylogenomic databases

eggNOGi NOG290245.
HOGENOMi HOG000238220.
InParanoidi Q9C7U5.
OMAi SHGTCVF.
PhylomeDBi Q9C7U5.

Enzyme and pathway databases

BioCyci ARA:AT1G66250-MONOMER.

Gene expression databases

ArrayExpressi Q9C7U5.
Genevestigatori Q9C7U5.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012946. X8.
[Graphical view ]
Pfami PF00332. Glyco_hydro_17. 1 hit.
PF07983. X8. 1 hit.
[Graphical view ]
SMARTi SM00768. X8. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00587. GLYCOSYL_HYDROL_F17. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Whole genome sequence comparisons and 'full-length' cDNA sequences: a combined approach to evaluate and improve Arabidopsis genome annotation."
    Castelli V., Aury J.-M., Jaillon O., Wincker P., Clepet C., Menard M., Cruaud C., Quetier F., Scarpelli C., Schaechter V., Temple G., Caboche M., Weissenbach J., Salanoubat M.
    Genome Res. 14:406-413(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis."
    Borner G.H.H., Lilley K.S., Stevens T.J., Dupree P.
    Plant Physiol. 132:568-577(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: GPI-ANCHOR [LARGE SCALE ANALYSIS].
    Strain: cv. Columbia.
    Tissue: Callus.

Entry informationi

Entry nameiE132_ARATH
AccessioniPrimary (citable) accession number: Q9C7U5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 3, 2006
Last sequence update: October 3, 2006
Last modified: September 3, 2014
This is version 81 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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