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Protein
Submitted name:

Proline-rich protein, putative

Gene

F23H24.15

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Proline-rich protein, putativeImported
Submitted name:
Putative proline-rich proteinImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:F23H24.15Imported
Ordered Locus Names:At1g51090Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRiAT1G51090.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G51090.1.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410JSDT. Eukaryota.
ENOG41108WE. LUCA.
HOGENOMiHOG000091096.
OMAiNTIIIKV.

Family and domain databases

InterProiIPR006121. HMA_dom.
[Graphical view]
SUPFAMiSSF55008. SSF55008. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9C684-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEKVVMMKL KVDLNCSKCY KKVKKAIRKF PQITDELFDE KSNTIIIKVV
60 70 80 90 100
CYDPERLMNK LCYKGDGSIK SIVILEPPKP PQPQPQPPQK PTAPAPAPAQ
110 120 130 140 150
AQAPALVRPA PVPVLVSSSA PQPMPMWQPY HCGPYYEAQQ YQCYGRPVYE
160 170
SWGGGRQCCH EDMNSQGCSI M
Length:171
Mass (Da):19,138
Last modified:June 1, 2001 - v1
Checksum:i86F91FB529D7D8E7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC079828 Genomic DNA. Translation: AAG50537.1.
AY035097 mRNA. Translation: AAK59602.1.
AY062944 mRNA. Translation: AAL33774.1.
CP002684 Genomic DNA. Translation: AEE32621.1.
PIRiB96548.
RefSeqiNP_175520.1. NM_103987.1.
UniGeneiAt.17181.

Genome annotation databases

EnsemblPlantsiAT1G51090.1; AT1G51090.1; AT1G51090.
GeneIDi841532.
GrameneiAT1G51090.1; AT1G51090.1; AT1G51090.
KEGGiath:AT1G51090.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC079828 Genomic DNA. Translation: AAG50537.1.
AY035097 mRNA. Translation: AAK59602.1.
AY062944 mRNA. Translation: AAL33774.1.
CP002684 Genomic DNA. Translation: AEE32621.1.
PIRiB96548.
RefSeqiNP_175520.1. NM_103987.1.
UniGeneiAt.17181.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT1G51090.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G51090.1; AT1G51090.1; AT1G51090.
GeneIDi841532.
GrameneiAT1G51090.1; AT1G51090.1; AT1G51090.
KEGGiath:AT1G51090.

Organism-specific databases

TAIRiAT1G51090.

Phylogenomic databases

eggNOGiENOG410JSDT. Eukaryota.
ENOG41108WE. LUCA.
HOGENOMiHOG000091096.
OMAiNTIIIKV.

Family and domain databases

InterProiIPR006121. HMA_dom.
[Graphical view]
SUPFAMiSSF55008. SSF55008. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. ColumbiaImported.
  2. "Arabidopsis thaliana chromosome 1 BAC F23H24 genomic sequence."
    Lin X., Kaul S., Town C.D., Benito M., Creasy T.H., Haas B.J., Wu D., Maiti R., Ronning C.M., Koo H., Fujii C.Y., Utterback T.R., Barnstead M.E., Bowman C.L., White O., Nierman W.C., Fraser C.M.
    Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  3. Cited for: NUCLEOTIDE SEQUENCE.
  4. "Arabidopsis Open Reading Frame (ORF) Clones."
    Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Etgu P., Lee J.M., Toriumi M., Yu G., Brooks S., Chao Q., Chen H., Karlin-Neumann G., Kim C., Lam B., Miranda M., Nguyen M., Palm C.J.
    , Shinn P., Southwick A., Davis R.W., Ecker J.R., Theologis A.
    Submitted (NOV-2001) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  5. TAIR
    Swarbreck D., Lamesch P., Wilks C., Huala E.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  6. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. ColumbiaImported.

Entry informationi

Entry nameiQ9C684_ARATH
AccessioniPrimary (citable) accession number: Q9C684
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: July 6, 2016
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.