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Q9C684

- Q9C684_ARATH

UniProt

Q9C684 - Q9C684_ARATH

Protein
Submitted name:

Proline-rich protein, putative

Gene

F23H24.15

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 73 (01 Oct 2014)
      Sequence version 1 (01 Jun 2001)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. metal ion binding Source: InterPro

    GO - Biological processi

    1. defense response to fungus Source: TAIR
    2. metal ion transport Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Proline-rich protein, putativeImported
    Submitted name:
    Putative proline-rich proteinImported
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:F23H24.15Imported
    Ordered Locus Names:At1g51090Imported
    OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 1

    Organism-specific databases

    TAIRiAT1G51090.

    Expressioni

    Gene expression databases

    GenevestigatoriQ9C684.

    Interactioni

    Protein-protein interaction databases

    STRINGi3702.AT1G51090.1-P.

    Structurei

    3D structure databases

    SMRiQ9C684. Positions 7-68.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGieuNOG12392.
    HOGENOMiHOG000091096.
    InParanoidiQ9C684.
    OMAiCHEDMNS.
    PhylomeDBiQ9C684.

    Family and domain databases

    InterProiIPR006121. HeavyMe-assoc_HMA.
    [Graphical view]
    PfamiPF00403. HMA. 1 hit.
    [Graphical view]
    SUPFAMiSSF55008. SSF55008. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q9C684-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAEKVVMMKL KVDLNCSKCY KKVKKAIRKF PQITDELFDE KSNTIIIKVV    50
    CYDPERLMNK LCYKGDGSIK SIVILEPPKP PQPQPQPPQK PTAPAPAPAQ 100
    AQAPALVRPA PVPVLVSSSA PQPMPMWQPY HCGPYYEAQQ YQCYGRPVYE 150
    SWGGGRQCCH EDMNSQGCSI M 171
    Length:171
    Mass (Da):19,138
    Last modified:June 1, 2001 - v1
    Checksum:i86F91FB529D7D8E7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC079828 Genomic DNA. Translation: AAG50537.1.
    AY035097 mRNA. Translation: AAK59602.1.
    AY062944 mRNA. Translation: AAL33774.1.
    CP002684 Genomic DNA. Translation: AEE32621.1.
    PIRiB96548.
    RefSeqiNP_175520.1. NM_103987.1.
    UniGeneiAt.17181.

    Genome annotation databases

    EnsemblPlantsiAT1G51090.1; AT1G51090.1; AT1G51090.
    GeneIDi841532.
    KEGGiath:AT1G51090.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC079828 Genomic DNA. Translation: AAG50537.1 .
    AY035097 mRNA. Translation: AAK59602.1 .
    AY062944 mRNA. Translation: AAL33774.1 .
    CP002684 Genomic DNA. Translation: AEE32621.1 .
    PIRi B96548.
    RefSeqi NP_175520.1. NM_103987.1.
    UniGenei At.17181.

    3D structure databases

    SMRi Q9C684. Positions 7-68.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3702.AT1G51090.1-P.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT1G51090.1 ; AT1G51090.1 ; AT1G51090 .
    GeneIDi 841532.
    KEGGi ath:AT1G51090.

    Organism-specific databases

    TAIRi AT1G51090.

    Phylogenomic databases

    eggNOGi euNOG12392.
    HOGENOMi HOG000091096.
    InParanoidi Q9C684.
    OMAi CHEDMNS.
    PhylomeDBi Q9C684.

    Gene expression databases

    Genevestigatori Q9C684.

    Family and domain databases

    InterProi IPR006121. HeavyMe-assoc_HMA.
    [Graphical view ]
    Pfami PF00403. HMA. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55008. SSF55008. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
      Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
      , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
      Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. ColumbiaImported.
    2. "Arabidopsis thaliana chromosome 1 BAC F23H24 genomic sequence."
      Lin X., Kaul S., Town C.D., Benito M., Creasy T.H., Haas B.J., Wu D., Maiti R., Ronning C.M., Koo H., Fujii C.Y., Utterback T.R., Barnstead M.E., Bowman C.L., White O., Nierman W.C., Fraser C.M.
      Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    3. Cited for: NUCLEOTIDE SEQUENCE.
    4. "Arabidopsis Open Reading Frame (ORF) Clones."
      Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Etgu P., Lee J.M., Toriumi M., Yu G., Brooks S., Chao Q., Chen H., Karlin-Neumann G., Kim C., Lam B., Miranda M., Nguyen M., Palm C.J.
      , Shinn P., Southwick A., Davis R.W., Ecker J.R., Theologis A.
      Submitted (NOV-2001) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    5. TAIR
      Swarbreck D., Lamesch P., Wilks C., Huala E.
      Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    6. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. ColumbiaImported.

    Entry informationi

    Entry nameiQ9C684_ARATH
    AccessioniPrimary (citable) accession number: Q9C684
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 2001
    Last sequence update: June 1, 2001
    Last modified: October 1, 2014
    This is version 73 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3