Q9C643 (Q9C643_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Xylan endohydrolase isoenzyme, putative EMBL AAG50641.1

Gene names

Name:

F9K23.10 EMBL AAG50641.1

Organism

Arabidopsis thaliana (Mouse-ear cress) EMBL AAG50641.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	915 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 10 (cellulase F) family. RuleBase RU003432

Ontologies

Keywords
Molecular function	Glycosidase RuleBase RU003432 Hydrolase
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9C643 [UniParc]. Last modified June 1, 2001. Version 1. Checksum: BD6B82A4CF67E41A	FASTA	915	102,217
	10 20 30 40 50 60 MEVSRKDNEE PEKQNNNNVA SIIGSDRTNV IVNHDFSSGM HSWHPNCCEA FVVTAESNVS 70 80 90 100 110 120 HGVLDPSKCG SYVVVKNRKE TWQGLEQDIT NRVKPCSLYK VSATVAVSGP VHGLVEVMAT 130 140 150 160 170 180 LKLESQQSQT NYQFIAKTCV FKEKWVRLEG MFSLPSLPEK VVFYLEGPSP GIDLLIQSVT 190 200 210 220 230 240 IHRESEPERV TAEDETIVVN PNFEDGLNNW SGRSCKIVLH DSMADGKIVP ESGKVFASAT 250 260 270 280 290 300 ERTQNWNGIQ QEITGKVQRK RVYEATAVVR IYGNNVTTAT VQATLWVQNP NQRDQYIGIS 310 320 330 340 350 360 TVQATDKEWI HLKGKFLLNG SASRVVIYIE GPPPGTDILL NSLTVKHAEK IPPSPPPSIE 370 380 390 400 410 420 NPAFGVNILT NSHLSDDTTN GWFSLGNCTL SVAEGSPRIL PPMARDSLGA HERLSGRYIL 430 440 450 460 470 480 VTNRTQTWMG PAQMITDKLK LFLTYQISVW VKVGSGINSP QNVNVALGID SQWVNGGQVE 490 500 510 520 530 540 INDDRWHEIG GSFRIEKNPS KALVYVQGPS SGIDLMVAGL QIFPVDRLAR IKHLKRQCDK 550 560 570 580 590 600 IRKRDVILKF AGVDSSKFSG ASVRVRQIRN SFPVGTCISR SNIDNEDFVD FFLKNFNWAV 610 620 630 640 650 660 FANELKWYWT EPEQGKLNYQ DADDMLNLCS SNNIETRGHC IFWEVQATVQ QWIQNMNQTD 670 680 690 700 710 720 LNNAVQNRLT DLLNRYKGKF KHYDVNNEML HGSFYQDKLG KDIRVNMFKT AHQLDPSATL 730 740 750 760 770 780 FVNDYHIEDG CDPKSCPEKY TEQILDLQEK GAPVGGIGIQ GHIDSPVGPI VCSALDKLGI 790 800 810 820 830 840 LGLPIWFTEL DVSSVNEHIR ADDLEVMMWE AFGHPAVEGI MLWGFWELFM SRDNSHLVNA 850 860 870 880 890 900 EGDVNEAGKR FLAVKKDWLS HANGHIDQNG AFPFRGYSGN YAVEVITTSS SKVLKTFGVD 910 KEDSSQVITV DLQGL

References

[1]	"Arabidopsis thaliana chromosome 1 BAC F9K23 genomic sequence." Lin X., Kaul S., Town C.D., Benito M., Creasy T.H., Haas B.J., Wu D., Maiti R., Ronning C.M., Koo H., Fujii C.Y., Utterback T.R., Barnstead M.E., Bowman C.L., White O., Nierman W.C., Fraser C.M. Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC082643 Genomic DNA. Translation: AAG50641.1.
IPI	IPI00533484.
PIR	D96617.
3D structure databases
ProteinModelPortal	Q9C643.
SMR	Q9C643. Positions 567-857.
ModBase	Search...
Protein-protein interaction databases
STRING	Q9C643.
Protein family/group databases
CAZy	CBM22. Carbohydrate-Binding Module Family 22. GH10. Glycoside Hydrolase Family 10.
Proteomic databases
PRIDE	Q9C643.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Phylogenomic databases
eggNOG	euNOG04666.
Gene expression databases
Genevestigator	Q9C643.
Family and domain databases
InterPro	IPR003305. CenC_carb-bd. IPR008979. Galactose-bd-like. IPR001000. Glyco_hydro_10. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF02018. CBM_4_9. 3 hits. PF00331. Glyco_hydro_10. 1 hit. [Graphical view]
PRINTS	PR00134. GLHYDRLASE10.
SMART	SM00633. Glyco_10. 1 hit. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 3 hits. SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q9C643_ARATH

Accession

Primary (citable) accession number: Q9C643

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2001
Last sequence update:	June 1, 2001
Last modified:	November 16, 2011
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)