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Protein

Cationic amino acid transporter 9, chloroplastic

Gene

CAT9

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Permease involved in the transport of the cationic amino acids.By similarity

GO - Molecular functioni

Keywordsi

Biological processAmino-acid transport, Transport

Enzyme and pathway databases

ReactomeiR-ATH-352230. Amino acid transport across the plasma membrane.

Names & Taxonomyi

Protein namesi
Recommended name:
Cationic amino acid transporter 9, chloroplastic
Gene namesi
Name:CAT9
Ordered Locus Names:At1g05940
ORF Names:T21E18.1
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G05940.
TAIRilocus:2198861. AT1G05940.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei53 – 73HelicalSequence analysisAdd BLAST21
Transmembranei81 – 101HelicalSequence analysisAdd BLAST21
Transmembranei113 – 135HelicalSequence analysisAdd BLAST23
Transmembranei155 – 175HelicalSequence analysisAdd BLAST21
Transmembranei181 – 201HelicalSequence analysisAdd BLAST21
Transmembranei215 – 235HelicalSequence analysisAdd BLAST21
Transmembranei250 – 270HelicalSequence analysisAdd BLAST21
Transmembranei284 – 304HelicalSequence analysisAdd BLAST21
Transmembranei333 – 353HelicalSequence analysisAdd BLAST21
Transmembranei406 – 428HelicalSequence analysisAdd BLAST23
Transmembranei444 – 464HelicalSequence analysisAdd BLAST21
Transmembranei467 – 487HelicalSequence analysisAdd BLAST21
Transmembranei502 – 522HelicalSequence analysisAdd BLAST21
Transmembranei528 – 548HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Chloroplast, Membrane, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 41ChloroplastSequence analysisAdd BLAST41
ChainiPRO_000041578542 – 569Cationic amino acid transporter 9, chloroplasticAdd BLAST528

Proteomic databases

PaxDbiQ9C5D6.

PTM databases

iPTMnetiQ9C5D6.
SwissPalmiQ9C5D6.

Expressioni

Tissue specificityi

Expressed in roots, stems, flowers, and leaves.1 Publication

Gene expression databases

ExpressionAtlasiQ9C5D6. baseline and differential.
GenevisibleiQ9C5D6. AT.

Interactioni

Protein-protein interaction databases

BioGridi22346. 12 interactors.
STRINGi3702.AT1G05940.1.

Structurei

3D structure databases

ProteinModelPortaliQ9C5D6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG1286. Eukaryota.
COG0531. LUCA.
HOGENOMiHOG000250622.
InParanoidiQ9C5D6.
OMAiTIKWIVT.
OrthoDBiEOG093608BU.
PhylomeDBiQ9C5D6.

Family and domain databases

InterProiView protein in InterPro
IPR002293. AA/rel_permease1.
IPR029485. CAT_C.
PfamiView protein in Pfam
PF13520. AA_permease_2. 1 hit.
PF13906. AA_permease_C. 1 hit.
PIRSFiPIRSF006060. AA_transporter. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9C5D6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGGHEGFSNQ RLSSATWFSH FRASALRSKS LPPPSSQTAV RSTSGDSLVR
60 70 80 90 100
RLGLFDLILL GVGASIGAGV FVVTGTVARD AGPGVTISFL LAGASCVLNA
110 120 130 140 150
LCYAELSSRF PAVVGGAYMY SYSAFNEITA FLVFVQLMLD YHIGAASISR
160 170 180 190 200
SLASYAVALL ELFPALKGSI PLWMGSGKEL LGGLLSLNIL APILLALLTL
210 220 230 240 250
VLCQGVRESS AVNSVMTATK VVIVLVVICA GAFEIDVANW SPFAPNGFKA
260 270 280 290 300
VLTGATVVFF SYVGFDAVAN SAEESKNPQR DLPIGIMGSL LVCISLYIGV
310 320 330 340 350
CLVLTGMVPF SLLSEDAPLA EAFSSKGMKF VSILISIGAV AGLTTTLLVG
360 370 380 390 400
LYVQSRLYLG LGRDGLLPSI FSRIHPTLHT PLHSQIWCGI VAGVLAGIFN
410 420 430 440 450
VHSLSHILSV GTLTGYSVVA ACVVALRLND KKDRESSNRW TSSWQEGVIC
460 470 480 490 500
LVIIACSGFG AGVFYRFSAS VIFILLSVGV AVVASAVLHY RQAYALPLGS
510 520 530 540 550
GFSCPGVPIV PSVCIFFNIF LFAQLHYEAW IRFVVVSVLA TAVYALYGQY
560
HADPSMLDYQ RAPETESDA
Length:569
Mass (Da):60,176
Last modified:June 1, 2001 - v1
Checksum:i6CA2175C63329091
GO

Sequence cautioni

The sequence AAF80119 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC024174 Genomic DNA. Translation: AAF80119.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE27921.1.
AF360321 mRNA. Translation: AAK26031.1.
AY113890 mRNA. Translation: AAM44938.1.
PIRiE86194.
RefSeqiNP_563754.1. NM_100475.4.
UniGeneiAt.15456.

Genome annotation databases

EnsemblPlantsiAT1G05940.1; AT1G05940.1; AT1G05940.
GeneIDi837104.
GrameneiAT1G05940.1; AT1G05940.1; AT1G05940.
KEGGiath:AT1G05940.

Similar proteinsi

Entry informationi

Entry nameiCAAT9_ARATH
AccessioniPrimary (citable) accession number: Q9C5D6
Secondary accession number(s): Q9LNF0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 22, 2012
Last sequence update: June 1, 2001
Last modified: August 30, 2017
This is version 111 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families