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Q9C524

- SCRK6_ARATH

UniProt

Q9C524 - SCRK6_ARATH

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Protein

Probable fructokinase-6, chloroplastic

Gene

At1g66430

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

May play an important role in maintaining the flux of carbon towards starch formation.By similarity

Catalytic activityi

ATP + D-fructose = ADP + D-fructose 6-phosphate.

Pathwayi

GO - Molecular functioni

  1. ribokinase activity Source: InterPro

GO - Biological processi

  1. D-ribose metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Kinase, Transferase

Keywords - Biological processi

Carbohydrate metabolism

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciARA:AT1G66430-MONOMER.
UniPathwayiUPA00152.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable fructokinase-6, chloroplastic (EC:2.7.1.4)
Gene namesi
Ordered Locus Names:At1g66430Imported
ORF Names:F28G11.11Imported, T27F4.17Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 1

Organism-specific databases

TAIRiAT1G66430.

Subcellular locationi

Plastidchloroplast Sequence Analysis

GO - Cellular componenti

  1. chloroplast Source: TAIR
  2. chloroplast stroma Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 4646ChloroplastSequence AnalysisAdd
BLAST
Chaini47 – 384338Probable fructokinase-6, chloroplasticPRO_0000430866Add
BLAST

Proteomic databases

PaxDbiQ8H119.
PRIDEiQ8H119.

Expressioni

Gene expression databases

ExpressionAtlasiQ9C524. baseline and differential.
GenevestigatoriQ9C524.

Structurei

3D structure databases

ProteinModelPortaliQ9C524.
SMRiQ9C524. Positions 66-370.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the carbohydrate kinase PfkB family.UniRule annotation

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiCOG0524.
HOGENOMiHOG000235951.
InParanoidiQ9C524.
KOiK00847.
OMAiDEDLEWF.
PhylomeDBiQ9C524.

Family and domain databases

Gene3Di3.40.1190.20. 1 hit.
InterProiIPR002173. Carboh/pur_kinase_PfkB_CS.
IPR011611. PfkB_dom.
IPR002139. Ribokinase.
IPR029056. Ribokinase-like.
[Graphical view]
PfamiPF00294. PfkB. 1 hit.
[Graphical view]
PRINTSiPR00990. RIBOKINASE.
SUPFAMiSSF53613. SSF53613. 1 hit.
PROSITEiPS00583. PFKB_KINASES_1. 1 hit.
PS00584. PFKB_KINASES_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9C524 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MALQATTTTF CFSGPTFRST PHSLTSKRPI SIKATTSSPS RLSNSRSNLK
60 70 80 90 100
GRALSSDGST QESPYVVCFG EMLIDFVPTT SGLSLADAPA FKKAPGGAPA
110 120 130 140 150
NVAVGIARLG GSSAFIGKVG EDEFGYMLAN ILKDNNVNND GMRFDPGART
160 170 180 190 200
ALAFVTLTNE GEREFMFYRN PSADMLLEES ELDFDLIKKA KIFHYGSISL
210 220 230 240 250
ITEPCKSAHI SAAKAAKEAG VILSYDPNLR LPLWPSADNA REEILSIWET
260 270 280 290 300
ADIIKISEEE IVFLTKGEDP YDDNVVRKLF HPKLKLLLVT EGPEGCRYYT
310 320 330 340 350
KDFSGRVHGL KVDVVDTTGA GDAFVAGILS QLANDLSLLQ DEERLREALM
360 370 380
FANACGALTV KVRGAIPALP TKEAVHEALL KAVV
Length:384
Mass (Da):41,471
Last modified:June 1, 2001 - v1
Checksum:i8873EC5152F65928
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti304 – 3041S → R in BX816698. (PubMed:14993207)Curated

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC074025 Genomic DNA. Translation: AAG51160.1.
AC020665 Genomic DNA. Translation: AAG52172.1.
CP002684 Genomic DNA. Translation: AEE34508.1.
BX816698 mRNA. No translation available.
AF370329 mRNA. Translation: AAK44144.2.
BT000889 mRNA. Translation: AAN41289.1.
PIRiG96689.
RefSeqiNP_564875.2. NM_105314.4.
UniGeneiAt.21279.

Genome annotation databases

EnsemblPlantsiAT1G66430.1; AT1G66430.1; AT1G66430.
GeneIDi842961.
KEGGiath:AT1G66430.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC074025 Genomic DNA. Translation: AAG51160.1 .
AC020665 Genomic DNA. Translation: AAG52172.1 .
CP002684 Genomic DNA. Translation: AEE34508.1 .
BX816698 mRNA. No translation available.
AF370329 mRNA. Translation: AAK44144.2 .
BT000889 mRNA. Translation: AAN41289.1 .
PIRi G96689.
RefSeqi NP_564875.2. NM_105314.4.
UniGenei At.21279.

3D structure databases

ProteinModelPortali Q9C524.
SMRi Q9C524. Positions 66-370.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PaxDbi Q8H119.
PRIDEi Q8H119.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT1G66430.1 ; AT1G66430.1 ; AT1G66430 .
GeneIDi 842961.
KEGGi ath:AT1G66430.

Organism-specific databases

TAIRi AT1G66430.

Phylogenomic databases

eggNOGi COG0524.
HOGENOMi HOG000235951.
InParanoidi Q9C524.
KOi K00847.
OMAi DEDLEWF.
PhylomeDBi Q9C524.

Enzyme and pathway databases

UniPathwayi UPA00152 .
BioCyci ARA:AT1G66430-MONOMER.

Gene expression databases

ExpressionAtlasi Q9C524. baseline and differential.
Genevestigatori Q9C524.

Family and domain databases

Gene3Di 3.40.1190.20. 1 hit.
InterProi IPR002173. Carboh/pur_kinase_PfkB_CS.
IPR011611. PfkB_dom.
IPR002139. Ribokinase.
IPR029056. Ribokinase-like.
[Graphical view ]
Pfami PF00294. PfkB. 1 hit.
[Graphical view ]
PRINTSi PR00990. RIBOKINASE.
SUPFAMi SSF53613. SSF53613. 1 hit.
PROSITEi PS00583. PFKB_KINASES_1. 1 hit.
PS00584. PFKB_KINASES_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Whole genome sequence comparisons and 'full-length' cDNA sequences: a combined approach to evaluate and improve Arabidopsis genome annotation."
    Castelli V., Aury J.-M., Jaillon O., Wincker P., Clepet C., Menard M., Cruaud C., Quetier F., Scarpelli C., Schaechter V., Temple G., Caboche M., Weissenbach J., Salanoubat M.
    Genome Res. 14:406-413(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 142-384.
    Strain: cv. Columbia.

Entry informationi

Entry nameiSCRK6_ARATH
AccessioniPrimary (citable) accession number: Q9C524
Secondary accession number(s): Q8H119, Q94K38
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 29, 2014
Last sequence update: June 1, 2001
Last modified: October 29, 2014
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3