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Protein

40S ribosomal protein S6-B

Gene

rps602

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Miscellaneous

There are two genes for S6 in S.pombe.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SPO-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-SPO-1799339 SRP-dependent cotranslational protein targeting to membrane
R-SPO-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-SPO-72649 Translation initiation complex formation
R-SPO-72689 Formation of a pool of free 40S subunits
R-SPO-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-SPO-72702 Ribosomal scanning and start codon recognition
R-SPO-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-SPO-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-SPO-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S6-B
Gene namesi
Name:rps602
Synonyms:rps6b
ORF Names:SPAPB1E7.12
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAPB1E7.12
PomBaseiSPAPB1E7.12 rps602

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001373401 – 23940S ribosomal protein S6-BAdd BLAST239

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei148Phosphoserine1 Publication1
Modified residuei235PhosphoserineSequence analysis1
Modified residuei236PhosphoserineSequence analysis1

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiQ9C0Z7
PaxDbiQ9C0Z7
PRIDEiQ9C0Z7

PTM databases

iPTMnetiQ9C0Z7

Interactioni

Protein-protein interaction databases

BioGridi2799969 interactors.
STRINGi4896.SPAPB1E7.12.1

Structurei

3D structure databases

SMRiQ9C0Z7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000190952
InParanoidiQ9C0Z7
KOiK02991
OMAiKGYIFRI
OrthoDBiEOG092C4QCP
PhylomeDBiQ9C0Z7

Family and domain databases

InterProiView protein in InterPro
IPR014401 Ribosomal_S6_euk
IPR001377 Ribosomal_S6e
IPR018282 Ribosomal_S6e_CS
PANTHERiPTHR11502 PTHR11502, 1 hit
PfamiView protein in Pfam
PF01092 Ribosomal_S6e, 1 hit
PIRSFiPIRSF002129 Ribosom_S6_euk, 1 hit
SMARTiView protein in SMART
SM01405 Ribosomal_S6e, 1 hit
PROSITEiView protein in PROSITE
PS00578 RIBOSOMAL_S6E, 1 hit

Sequencei

Sequence statusi: Complete.

Q9C0Z7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLNISYPAN GTQKLIEIDD DRRLRVFMEK RMGQEVPGDS VGPEFAGYVF
60 70 80 90 100
KITGGNDKQG FPMFQGVLLP HRVRLLLRAG HPCYRPRRDG ERKRKSVRGC
110 120 130 140 150
IVGQDLAVLA LAIVKQGEQD IPGLTDVTVP KRLGPKRASK IRRFFNLSKE
160 170 180 190 200
DDVRQFVIRR EVVPKKEGKK PYTKAPKIQR LVTPRTLQHK RHRFALKRRQ
210 220 230
AEKNREEAAE FAQLMAKRVA EAKQKKEVVK ARRASSMKK
Length:239
Mass (Da):27,475
Last modified:June 1, 2001 - v1
Checksum:i3C6574BF6A3F3309
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA Translation: CAC36929.1
RefSeqiNP_594138.1, NM_001019562.2

Genome annotation databases

EnsemblFungiiSPAPB1E7.12.1; SPAPB1E7.12.1:pep; SPAPB1E7.12
GeneIDi2543581
KEGGispo:SPAPB1E7.12

Similar proteinsi

Entry informationi

Entry nameiRS6B_SCHPO
AccessioniPrimary (citable) accession number: Q9C0Z7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 23, 2002
Last sequence update: June 1, 2001
Last modified: February 28, 2018
This is version 114 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome