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Protein

Uncharacterized transporter PB10D8.01

Gene

SPBPB10D8.01

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized transporter PB10D8.01
Gene namesi
ORF Names:SPBPB10D8.01
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBPB10D8.01.
PomBaseiSPBPB10D8.01.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei83 – 10321HelicalSequence analysisAdd
BLAST
Transmembranei163 – 18321HelicalSequence analysisAdd
BLAST
Transmembranei185 – 20521HelicalSequence analysisAdd
BLAST
Transmembranei216 – 23621HelicalSequence analysisAdd
BLAST
Transmembranei248 – 26821HelicalSequence analysisAdd
BLAST
Transmembranei353 – 37321HelicalSequence analysisAdd
BLAST
Transmembranei381 – 40121HelicalSequence analysisAdd
BLAST
Transmembranei410 – 43021HelicalSequence analysisAdd
BLAST
Transmembranei444 – 46421HelicalSequence analysisAdd
BLAST
Transmembranei472 – 49221HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

  • endoplasmic reticulum Source: PomBase
  • integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 552552Uncharacterized transporter PB10D8.01PRO_0000121376Add
BLAST

Interactioni

Protein-protein interaction databases

BioGridi277908. 5 interactions.
MINTiMINT-4701860.

Structurei

3D structure databases

ProteinModelPortaliQ9C0V8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000171758.
InParanoidiQ9C0V8.
OrthoDBiEOG7B31X2.
PhylomeDBiQ9C0V8.

Family and domain databases

InterProiIPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9C0V8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPQPSYADQI NVEDSSDYEK DPKEYVDKEK GYFPHVITSH ISKSSSQSHP
60 70 80 90 100
DVSNAVLDET FSFMQEAKDL EPLTPKQDKR LRWKLYFTVL VMLMILDMML
110 120 130 140 150
YIDKATLSYS SILGLFEDTH INSNQYNDIN TLFYVGFVIG QIPGHMLLQR
160 170 180 190 200
FPVSKFVAAS TALWTIIIFL HCAAYNFSGL MALRFFLGLV ESSLLPTMEA
210 220 230 240 250
TIGMFFPHSE QALLQPFFYI SCYGCNIPAG FIAYGVQYAK NTISPWKLFM
260 270 280 290 300
IIVGGITFFL TIGLFFYYPD NTSTARFLTK KERLYTVDRV RRSNHSGIES
310 320 330 340 350
KTFKKYQVIE ALKDPVTWLF TFHVFCNQLS NNLAYQQNLL FTSLNVSDLN
360 370 380 390 400
STLVGVASAG YNCVSAIIAT YMMSVIKNQS AFHGAIWYIP SIAGGIACVA
410 420 430 440 450
MSWDHKIGEL AAIIIASNFG IPFIISLGWT TASCAGYTKK LTRGVMFMIG
460 470 480 490 500
YAIANIIGPQ MWQSRDAPRY YPAWIVQIVI AWSVSPFVLL IIRWILVRRN
510 520 530 540 550
KKRLALLEQN KEQYEKTWIE TIDSSGNHVS GFYENSMLDL TDQENLSFIY

PL
Length:552
Mass (Da):62,732
Last modified:June 1, 2001 - v1
Checksum:i37EEBD2B978C7425
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti131 – 1355TLFYV → YAFLC in BAA87280 (PubMed:10759889).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAC36910.1.
AB027976 Genomic DNA. Translation: BAA87280.1.
RefSeqiNP_595045.1. NM_001020950.2.

Genome annotation databases

EnsemblFungiiSPBPB10D8.01.1; SPBPB10D8.01.1:pep; SPBPB10D8.01.
GeneIDi2541399.
KEGGispo:SPBPB10D8.01.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAC36910.1.
AB027976 Genomic DNA. Translation: BAA87280.1.
RefSeqiNP_595045.1. NM_001020950.2.

3D structure databases

ProteinModelPortaliQ9C0V8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi277908. 5 interactions.
MINTiMINT-4701860.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPBPB10D8.01.1; SPBPB10D8.01.1:pep; SPBPB10D8.01.
GeneIDi2541399.
KEGGispo:SPBPB10D8.01.

Organism-specific databases

EuPathDBiFungiDB:SPBPB10D8.01.
PomBaseiSPBPB10D8.01.

Phylogenomic databases

HOGENOMiHOG000171758.
InParanoidiQ9C0V8.
OrthoDBiEOG7B31X2.
PhylomeDBiQ9C0V8.

Miscellaneous databases

NextBioi20802506.
PROiQ9C0V8.

Family and domain databases

InterProiIPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.
  2. "Large-scale screening of intracellular protein localization in living fission yeast cells by the use of a GFP-fusion genomic DNA library."
    Ding D.-Q., Tomita Y., Yamamoto A., Chikashige Y., Haraguchi T., Hiraoka Y.
    Genes Cells 5:169-190(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] OF 131-314, SUBCELLULAR LOCATION.
    Strain: ATCC 38364 / 968.

Entry informationi

Entry nameiYHJ1_SCHPO
AccessioniPrimary (citable) accession number: Q9C0V8
Secondary accession number(s): Q9UTV2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2003
Last sequence update: June 1, 2001
Last modified: May 11, 2016
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.