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Protein

Xylulose kinase

Gene

xks1

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + D-xylulose = ADP + D-xylulose 5-phosphate.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei88 – 881SubstrateBy similarity
Binding sitei158 – 1581SubstrateBy similarity
Binding sitei274 – 2741SubstrateBy similarity
Binding sitei275 – 2751SubstrateBy similarity
Binding sitei357 – 3571ATPBy similarity
Binding sitei459 – 4591ATPBy similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi455 – 4562ATPBy similarity

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. xylulokinase activity Source: PomBase

GO - Biological processi

  1. carbohydrate phosphorylation Source: GOC
  2. D-xylose metabolic process Source: UniProtKB-KW
  3. xylulose catabolic process Source: PomBase
Complete GO annotation...

Keywords - Molecular functioni

Kinase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Xylose metabolism

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Xylulose kinase (EC:2.7.1.17)
Short name:
Xylulokinase
Gene namesi
Name:xks1By similarity
ORF Names:SPCPJ732.02c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
ProteomesiUP000002485 Componenti: Chromosome III

Organism-specific databases

PomBaseiSPCPJ732.02c.

Subcellular locationi

Cytoplasm 1 Publication

GO - Cellular componenti

  1. cytosol Source: PomBase
  2. nucleus Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 555555Xylulose kinasePRO_0000311717Add
BLAST

Proteomic databases

MaxQBiQ9C0U6.

Interactioni

Protein-protein interaction databases

BioGridi276004. 22 interactions.
MINTiMINT-4701795.
STRINGi4896.SPCPJ732.02c-1.

Structurei

3D structure databases

ProteinModelPortaliQ9C0U6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the FGGY kinase family.Sequence Analysis

Phylogenomic databases

eggNOGiCOG1070.
HOGENOMiHOG000174850.
InParanoidiQ9C0U6.
KOiK00854.
OMAiGSYSPID.
OrthoDBiEOG7CRTZN.
PhylomeDBiQ9C0U6.

Family and domain databases

InterProiIPR018485. Carb_kinase_FGGY_C.
IPR018484. Carb_kinase_FGGY_N.
[Graphical view]
PfamiPF02782. FGGY_C. 1 hit.
PF00370. FGGY_N. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9C0U6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFLGLDLSTQ QLKGVVIDES LNVHQEVAVD FDRDLSDYNT IKGVYRNGYE
60 70 80 90 100
VFAPVCMWLD AIDLLFERLK ASVDVSKIQA ISGAGQQHAS VFLLKGSKKA
110 120 130 140 150
LNSLDAKSSL KQQLESLIHP TSPNWQDAST TKECEELESC IGGAKALADL
160 170 180 190 200
TGSKAHLRFT GPQIKRFRRL HPETYENTER IALVSNFLAS VLLQTEAPLD
210 220 230 240 250
ISDVCGMNLW DIQNEKFDIR LLEEVAGNSK GPDLANKLGT VEINGAKHLG
260 270 280 290 300
PIGKYFVKKY GFSPNCQIIP LTGDNPATIL SLPLRPGKDV LLSLGTSTTA
310 320 330 340 350
LMATQNYVCS PEYHMFAHPV TQNHYMVMLC YKNGSLAREQ VRNTINEKYN
360 370 380 390 400
VSDNTSWDRF NESILNPNIK GAGEKKQLGL FYPQREILPA VGPGTWRFAI
410 420 430 440 450
QGTELYQVDK DEESWDYPDE DASAIVESQN LDIRMRITPL LTGIPQPDRV
460 470 480 490 500
YVVGGASRNE AIVFKISQVL GCDVYRLKHG GSNACAVGGA IKAAYAMNGK
510 520 530 540 550
GFTFEEYVNK SWDESKKIEL IMNKPSAQTY EEYGKLLPFL KKAEDIAIQQ

SDIRH
Length:555
Mass (Da):61,683
Last modified:May 31, 2001 - v1
Checksum:i610CE6A309244E01
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAC34988.1.
RefSeqiNP_587930.1. NM_001022921.2.

Genome annotation databases

EnsemblFungiiSPCPJ732.02c.1; SPCPJ732.02c.1:pep; SPCPJ732.02c.
GeneIDi2539441.
KEGGispo:SPCPJ732.02c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAC34988.1.
RefSeqiNP_587930.1. NM_001022921.2.

3D structure databases

ProteinModelPortaliQ9C0U6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi276004. 22 interactions.
MINTiMINT-4701795.
STRINGi4896.SPCPJ732.02c-1.

Proteomic databases

MaxQBiQ9C0U6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPCPJ732.02c.1; SPCPJ732.02c.1:pep; SPCPJ732.02c.
GeneIDi2539441.
KEGGispo:SPCPJ732.02c.

Organism-specific databases

PomBaseiSPCPJ732.02c.

Phylogenomic databases

eggNOGiCOG1070.
HOGENOMiHOG000174850.
InParanoidiQ9C0U6.
KOiK00854.
OMAiGSYSPID.
OrthoDBiEOG7CRTZN.
PhylomeDBiQ9C0U6.

Miscellaneous databases

NextBioi20800603.
PROiQ9C0U6.

Family and domain databases

InterProiIPR018485. Carb_kinase_FGGY_C.
IPR018484. Carb_kinase_FGGY_N.
[Graphical view]
PfamiPF02782. FGGY_C. 1 hit.
PF00370. FGGY_N. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.
  2. "ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe."
    Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., Yoshida M.
    Nat. Biotechnol. 24:841-847(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiXKS1_SCHPO
AccessioniPrimary (citable) accession number: Q9C0U6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 12, 2007
Last sequence update: May 31, 2001
Last modified: January 6, 2015
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.