Q9BZI7 (REN3B_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 104.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Regulator of nonsense transcripts 3B Alternative name(s): Nonsense mRNA reducing factor 3B Up-frameshift suppressor 3 homolog B Short name=hUpf3B Up-frameshift suppressor 3 homolog on chromosome X Short name=hUpf3p-X | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 483 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Involved in nonsense-mediated decay (NMD) of mRNAs containing premature stop codons by associating with the nuclear exon junction complex (EJC) and serving as link between the EJC core and NMD machinery. Recruits UPF2 at the cytoplasmic side of the nuclear envelope and the subsequent formation of an UPF1-UPF2-UPF3 surveillance complex (including UPF1 bound to release factors at the stalled ribosome) is believed to activate NMD. In cooperation with UPF2 stimulates both ATPase and RNA helicase activities of UPF1. Binds spliced mRNA upstream of exon-exon junctions. In vitro, stimulates translation; the function is indepenedent of association with UPF2 and components of the EJC core. Ref.1 Ref.7 Ref.9 Ref.10 Ref.11 |
| Subunit structure | Found in a post-splicing messenger ribonucleoprotein (mRNP) complex. Associates with the exon junction complex (EJC); the EJC core components EIF4A3 and the MAGOH-RBM8A dimer form a composite binding site for UPF3B which overlaps with the EJC binding site for WIBG. Interacts with EST1A, UPF2 and RBM8A. Ref.1 Ref.2 Ref.5 Ref.6 Ref.7 Ref.8 Ref.9 |
| Subcellular location | Nucleus. Cytoplasm. Note: Shuttling between the nucleus and the cytoplasm. Ref.1 Ref.2 |
| Tissue specificity | Expressed in testis, uterus, prostate, heart, muscle, brain, spinal cord and placenta. Ref.2 |
| Involvement in disease | Mental retardation, X-linked, syndromic, 14 (MRXS14) [MIM:300676]: A disorder characterized by significantly below average general intellectual functioning associated with impairments in adaptative behavior and manifested during the developmental period. MRXS14 patients manifest mental retardation associated with other variable signs such as autistic features, slender build, poor musculature, long, thin face, high-arched palate, high nasal bridge, and pectus deformities. |
| Sequence similarities | Belongs to the RENT3 family. |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| EIF4A3 | P38919 | 4 | EBI-372780,EBI-299104 | |
| RBM8A | Q9Y5S9 | 8 | EBI-372780,EBI-447231 | |
| UPF1 | Q92900 | 8 | EBI-372780,EBI-373471 | |
| UPF2 | Q9HAU5 | 6 | EBI-372780,EBI-372073 |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9BZI7-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9BZI7-2) The sequence of this isoform differs from the canonical sequence as follows: 270-282: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||||||||||||||||||||
Molecule processing | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 483 | 483 | Regulator of nonsense transcripts 3B | PRO_0000215297 | ||||||||||||||||||||||
Regions | ||||||||||||||||||||||||||
| Region | 30 – 255 | 226 | Necessary for interaction with UPF2 | |||||||||||||||||||||||
| Region | 52 – 57 | 6 | Binds to UPF2 | |||||||||||||||||||||||
| Region | 94 – 483 | 390 | Sufficient for association with EJC core | |||||||||||||||||||||||
| Region | 430 – 447 | 18 | Necessary for interaction with RBM8A and for activating NMD | |||||||||||||||||||||||
Amino acid modifications | ||||||||||||||||||||||||||
| Modified residue | 169 | 1 | Phosphothreonine Ref.12 Ref.13 Ref.16 | |||||||||||||||||||||||
| Modified residue | 198 | 1 | Phosphothreonine Ref.14 | |||||||||||||||||||||||
| Modified residue | 310 | 1 | Phosphoserine Ref.16 | |||||||||||||||||||||||
Natural variations | ||||||||||||||||||||||||||
| Alternative sequence | 270 – 282 | 13 | Missing in isoform 2. | VSP_012963 | ||||||||||||||||||||||
| Natural variant | 160 | 1 | Y → D in MRXS14. Ref.19 | VAR_037666 | ||||||||||||||||||||||
Experimental info | ||||||||||||||||||||||||||
| Mutagenesis | 52 | 1 | K → E: Abolishes interaction with UPF2. Ref.17 | |||||||||||||||||||||||
| Mutagenesis | 53 – 58 | 6 | VVIRRL → AVARRA: Abolishes interaction with UPF2. Ref.2 | |||||||||||||||||||||||
| Mutagenesis | 56 | 1 | R → E: Does not abolish interaction with UPF2. Ref.17 | |||||||||||||||||||||||
| Mutagenesis | 117 – 119 | 3 | YVF → DVD: Abolishes interaction with UPF2. Ref.2 | |||||||||||||||||||||||
| Mutagenesis | 430 | 1 | R → A: Reduces NMD. Ref.7 | |||||||||||||||||||||||
| Mutagenesis | 432 | 1 | R → A: Reduces NMD. Ref.7 Ref.10 | |||||||||||||||||||||||
| Mutagenesis | 434 – 447 | 14 | Missing: Abolishes NMD. Ref.7 Ref.18 | |||||||||||||||||||||||
| Mutagenesis | 434 | 1 | K → A: Reduces NMD. Ref.7 | |||||||||||||||||||||||
| Mutagenesis | 435 | 1 | D → A: Reduces NMD. Ref.7 | |||||||||||||||||||||||
| Mutagenesis | 436 | 1 | R → A: Impairs association with EJC. Ref.7 Ref.18 | |||||||||||||||||||||||
| Mutagenesis | 436 | 1 | R → A: Reduces NMD. Ref.7 Ref.18 | |||||||||||||||||||||||
| Mutagenesis | 441 | 1 | L → F: Reduces NMD. Ref.7 | |||||||||||||||||||||||
| Mutagenesis | 442 | 1 | Y → A: Impairs association with EJC. Ref.18 | |||||||||||||||||||||||
| Mutagenesis | 447 | 1 | R → E: Abolishes NMD; when associated with E-449 and E-451. Ref.18 | |||||||||||||||||||||||
| Mutagenesis | 449 | 1 | R → E: Abolishes NMD; when associated with E-447 and E-451. Ref.18 | |||||||||||||||||||||||
| Mutagenesis | 451 | 1 | R → E: Abolishes NMD; when associated with E-447 and E-449. Ref.18 | |||||||||||||||||||||||
| Sequence conflict | 358 | 1 | R → H in AAI21018. Ref.4 | |||||||||||||||||||||||
Secondary structure | ||||||||||||||||||||||||||
Helix Strand Turn | ||||||||||||||||||||||||||
| Beta strand | 52 – 58 | 7 | ||||||||||||||||||||||||
| Helix | 64 – 71 | 8 | ||||||||||||||||||||||||
| Beta strand | 77 – 85 | 9 | ||||||||||||||||||||||||
| Beta strand | 95 – 104 | 10 | ||||||||||||||||||||||||
| Helix | 105 – 114 | 10 | ||||||||||||||||||||||||
| Beta strand | 118 – 120 | 3 | ||||||||||||||||||||||||
| Beta strand | 126 – 128 | 3 | ||||||||||||||||||||||||
| Beta strand | 130 – 133 | 4 | ||||||||||||||||||||||||
| Turn | 433 – 435 | 3 | ||||||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Human Upf proteins target an mRNA for nonsense-mediated decay when bound downstream of a termination codon." Lykke-Andersen J., Shu M.-D., Steitz J.A. Cell 103:1121-1131(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), FUNCTION IN NONSENSE-MEDIATED MRNA DECAY, INTERACTION WITH UPF1 AND UPF2, SUBCELLULAR LOCATION. |
| [2] | "Identification and characterization of human orthologues to Saccharomyces cerevisiae Upf2 protein and Upf3 protein (Caenorhabditis elegans SMG-4)." Serin G., Gersappe A., Black J.D., Aronoff R., Maquat L.E. Mol. Cell. Biol. 21:209-223(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), INTERACTION WITH UPF2, MUTAGENESIS OF 53-VAL--LEU-58 AND 117-TYR--PHE-119, SUBCELLULAR LOCATION, TISSUE SPECIFICITY. Tissue: Cervix carcinoma. |
| [3] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). |
| [5] | "Role of the nonsense-mediated decay factor hUpf3 in the splicing-dependent exon-exon junction complex." Kim V.N., Kataoka N., Dreyfuss G. Science 293:1832-1836(2001) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH RBM8A, IDENTIFICATION IN A POST-SPLICING MRNP COMPLEX, ASSOCIATION WITH THE EJC COMPLEX, RNA-BINDING. |
| [6] | "Communication of the position of exon-exon junctions to the mRNA surveillance machinery by the protein RNPS1." Lykke-Andersen J., Shu M.-D., Steitz J.A. Science 293:1836-1839(2001) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION IN A POST-SPLICING MRNP COMPLEX, ASSOCIATION WITH THE EJC COMPLEX. |
| [7] | "Y14 and hUpf3b form an NMD-activating complex." Gehring N.H., Neu-Yilik G., Schell T., Hentze M.W., Kulozik A.E. Mol. Cell 11:939-949(2003) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN NONSENSE-MEDIATED MRNA DECAY, INTERACTION WITH RBM8A, MUTAGENESIS OF ARG-430; ARG-432; 434-LYS--ARG-447; LYS-434; ASP-435; ARG-436 AND LEU-441. |
| [8] | "Characterization of human Smg5/7a: a protein with similarities to Caenorhabditis elegans SMG5 and SMG7 that functions in the dephosphorylation of Upf1." Chiu S.-Y., Serin G., Ohara O., Maquat L.E. RNA 9:77-87(2003) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH EST1A. |
| [9] | "Exon-junction complex components specify distinct routes of nonsense-mediated mRNA decay with differential cofactor requirements." Gehring N.H., Kunz J.B., Neu-Yilik G., Breit S., Viegas M.H., Hentze M.W., Kulozik A.E. Mol. Cell 20:65-75(2005) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN NONSENSE-MEDIATED MRNA DECAY (NMD), ASSOCIATION WITH THE EJC COMPLEX, IDENTIFICATION IN A COMPLEX WITH UPF2 AND RNPS1. |
| [10] | "Functions of hUpf3a and hUpf3b in nonsense-mediated mRNA decay and translation." Kunz J.B., Neu-Yilik G., Hentze M.W., Kulozik A.E., Gehring N.H. RNA 12:1015-1022(2006) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN NONSENSE-MEDIATED MRNA DECAY (NMD), FUNCTION IN TRANSLATION STIMULATION, ASSOCIATION WITH THE EJC COMPLEX, MUTAGENESIS OF ARG-432. |
| [11] | "NMD factors UPF2 and UPF3 bridge UPF1 to the exon junction complex and stimulate its RNA helicase activity." Chamieh H., Ballut L., Bonneau F., Le Hir H. Nat. Struct. Mol. Biol. 15:85-93(2008) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, RECONSTITUTION OF THE EJC CORE-UPF COMPLEX. |
| [12] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-169, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [13] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-169, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [14] | "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis." Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M. Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-198, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [15] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| [16] | "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation." Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B. Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-169 AND SER-310, MASS SPECTROMETRY. |
| [17] | "The structural basis for the interaction between nonsense-mediated mRNA decay factors UPF2 and UPF3." Kadlec J., Izaurralde E., Cusack S. Nat. Struct. Mol. Biol. 11:330-337(2004) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.95 ANGSTROMS) OF 50-140 IN COMPLEX WITH UPF2, RNA-BINDING, MUTAGENESIS OF LYS-52 AND ARG-56. |
| [18] | "Insights into the recruitment of the NMD machinery from the crystal structure of a core EJC-UPF3b complex." Buchwald G., Ebert J., Basquin C., Sauliere J., Jayachandran U., Bono F., Le Hir H., Conti E. Proc. Natl. Acad. Sci. U.S.A. 107:10050-10055(2010) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (3.4 ANGSTROMS) OF 424-483 IN COMPLEX WITH EIF4A3; MAGOH; RBM8A AND CASC3, MUTAGENESIS OF ARG-436; TYR-442; ARG-447; ARG-449 AND ARG-451. |
| [19] | "Mutations in UPF3B, a member of the nonsense-mediated mRNA decay complex, cause syndromic and nonsyndromic mental retardation." Tarpey P.S., Raymond F.L., Nguyen L.S., Rodriguez J., Hackett A., Vandeleur L., Smith R., Shoubridge C., Edkins S., Stevens C., O'Meara S., Tofts C., Barthorpe S., Buck G., Cole J., Halliday K., Hills K., Jones D. Gecz J.Nat. Genet. 39:1127-1133(2007) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT MRXS14 ASP-160. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AY013251 mRNA. Translation: AAG48511.1. AF318576 mRNA. Translation: AAG60691.1. CH471161 Genomic DNA. Translation: EAW89842.1. CH471161 Genomic DNA. Translation: EAW89844.1. CH471161 Genomic DNA. Translation: EAW89845.1. CH471161 Genomic DNA. Translation: EAW89846.1. BC121017 mRNA. Translation: AAI21018.1. | ||||||||||||||||||
| IPI | IPI00023409. IPI00074183. | ||||||||||||||||||
| RefSeq | NP_075386.1. NM_023010.3. NP_542199.1. NM_080632.2. | ||||||||||||||||||
| UniGene | Hs.103832. | ||||||||||||||||||
3D structure databases | |||||||||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||||||||
| ProteinModelPortal | Q9BZI7. | ||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||
| DIP | DIP-31143N. | ||||||||||||||||||
| IntAct | Q9BZI7. 19 interactions. | ||||||||||||||||||
| MINT | MINT-265168. | ||||||||||||||||||
| STRING | 9606.ENSP00000276201. | ||||||||||||||||||
PTM databases | |||||||||||||||||||
| PhosphoSite | Q9BZI7. | ||||||||||||||||||
Polymorphism databases | |||||||||||||||||||
| DMDM | 60390643. | ||||||||||||||||||
Proteomic databases | |||||||||||||||||||
| PaxDb | Q9BZI7. | ||||||||||||||||||
| PRIDE | Q9BZI7. | ||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||
Genome annotation databases | |||||||||||||||||||
| Ensembl | ENST00000276201; ENSP00000276201; ENSG00000125351. ENST00000345865; ENSP00000245418; ENSG00000125351. | ||||||||||||||||||
| GeneID | 65109. | ||||||||||||||||||
| KEGG | hsa:65109. | ||||||||||||||||||
| UCSC | uc004erz.2. human. uc004esa.2. human. | ||||||||||||||||||
Organism-specific databases | |||||||||||||||||||
| CTD | 65109. | ||||||||||||||||||
| GeneCards | GC0XM118967. | ||||||||||||||||||
| HGNC | HGNC:20439. UPF3B. | ||||||||||||||||||
| HPA | HPA001800. HPA001882. | ||||||||||||||||||
| MIM | 300298. gene. 300676. phenotype. | ||||||||||||||||||
| neXtProt | NX_Q9BZI7. | ||||||||||||||||||
| Orphanet | 323. FG syndrome. 776. X-linked intellectual deficit with marfanoid habitus. 777. X-linked nonsyndromic intellectual deficit. | ||||||||||||||||||
| PharmGKB | PA128394708. | ||||||||||||||||||
| GenAtlas | Search... | ||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||
| eggNOG | NOG251520. | ||||||||||||||||||
| HOGENOM | HOG000230909. | ||||||||||||||||||
| HOVERGEN | HBG059714. | ||||||||||||||||||
| InParanoid | Q9BZI7. | ||||||||||||||||||
| KO | K14328. | ||||||||||||||||||
| OMA | HLFARAY. | ||||||||||||||||||
| OrthoDB | EOG4001K9. | ||||||||||||||||||
| PhylomeDB | Q9BZI7. | ||||||||||||||||||
Enzyme and pathway databases | |||||||||||||||||||
| Reactome | REACT_1675. mRNA Processing. REACT_1788. Transcription. REACT_21257. Metabolism of RNA. REACT_71. Gene Expression. REACT_78. Post-Elongation Processing of the Transcript. | ||||||||||||||||||
Gene expression databases | |||||||||||||||||||
| Bgee | Q9BZI7. | ||||||||||||||||||
| CleanEx | HS_UPF3B. | ||||||||||||||||||
| Genevestigator | Q9BZI7. | ||||||||||||||||||
| GermOnline | ENSG00000125351. Homo sapiens. | ||||||||||||||||||
Family and domain databases | |||||||||||||||||||
| Gene3D | 3.30.70.330. 1 hit. | ||||||||||||||||||
| InterPro | IPR005120. Nonsense_mediated_decay_UPF3. IPR012677. Nucleotide-bd_a/b_plait. [Graphical view] | ||||||||||||||||||
| Pfam | PF03467. Smg4_UPF3. 1 hit. [Graphical view] | ||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||
Other | |||||||||||||||||||
| ChiTaRS | UPF3B. human. | ||||||||||||||||||
| EvolutionaryTrace | Q9BZI7. | ||||||||||||||||||
| GenomeRNAi | 65109. | ||||||||||||||||||
| NextBio | 67302. | ||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||
Entry information
| Entry name | REN3B_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9BZI7 Secondary accession number(s): D3DWI3 Q9H1J0 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome X Human chromosome X: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with
