Q9BZF3 (OSBL6_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 99.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Oxysterol-binding protein-related protein 6 Short name=ORP-6 Short name=OSBP-related protein 6 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 934 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Tissue specificity | Widely expressed. |
| Sequence similarities | Belongs to the OSBP family. Contains 1 PH domain. |
| Sequence caution | The sequence BAB55223.1 differs from that shown. Reason: Erroneous initiation. The sequence BAD92135.1 differs from that shown. Reason: Erroneous initiation. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Lipid transport Transport |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Ligand | Lipid-binding |
| PTM | Acetylation |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | lipid transport Inferred from electronic annotation. Source: UniProtKB-KW |
| Cellular_component | cytosol Inferred from direct assay PubMed 14593528. Source: BHF-UCL nuclear membraneInferred from direct assay PubMed 14593528. Source: BHF-UCL perinuclear endoplasmic reticulumInferred from direct assay PubMed 14593528. Source: BHF-UCL plasma membraneInferred from direct assay PubMed 14593528. Source: BHF-UCL |
| Molecular_function | phospholipid binding Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| ORF | Q9Q2G4 | 3 | EBI-2372709,EBI-6248094 | From a different organism. |
Alternative products
| This entry describes 5 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9BZF3-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9BZF3-2) The sequence of this isoform differs from the canonical sequence as follows: 431-466: Missing. | ||||||
| Isoform 3 (identifier: Q9BZF3-3) The sequence of this isoform differs from the canonical sequence as follows: 1-34: MSSDEKGISPAHKTSTPTHRSASSSTSSQRDSRQ → MHQLSLIRGNRGR 329-329: Q → QEGPPAKGQFSTTRRRQRLAAAVATT | ||||||
| Isoform 4 (identifier: Q9BZF3-4) The sequence of this isoform differs from the canonical sequence as follows: 298-328: Missing. | ||||||
| Isoform 5 (identifier: Q9BZF3-5) The sequence of this isoform differs from the canonical sequence as follows: 329-329: Q → QEGPPAKGQFSTTRRRQRLAAAVATT |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Initiator methionine | 1 | 1 | Removed Ref.10 | ||||||
| Chain | 2 – 934 | 933 | Oxysterol-binding protein-related protein 6 | PRO_0000100375 | |||||
Regions | |||||||||
| Domain | 86 – 181 | 96 | PH | ||||||
Amino acid modifications | |||||||||
| Modified residue | 2 | 1 | N-acetylserine Ref.10 | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 34 | 34 | MSSDE…RDSRQ → MHQLSLIRGNRGR in isoform 3. | VSP_036559 | |||||
| Alternative sequence | 298 – 328 | 31 | Missing in isoform 4. | VSP_036560 | |||||
| Alternative sequence | 329 | 1 | Q → QEGPPAKGQFSTTRRRQRLA AAVATT in isoform 3 and isoform 5. | VSP_036561 | |||||
| Alternative sequence | 431 – 466 | 36 | Missing in isoform 2. | VSP_010013 | |||||
| Natural variant | 53 | 1 | R → Q. Corresponds to variant rs35032920 [ dbSNP | Ensembl ]. | VAR_057663 | |||||
| Natural variant | 58 | 1 | P → L. Corresponds to variant rs34874235 [ dbSNP | Ensembl ]. | VAR_053550 | |||||
Experimental info | |||||||||
| Sequence conflict | 319 | 1 | S → G in BAB55223. Ref.4 | ||||||
| Sequence conflict | 350 | 1 | A → V in BAG62123. Ref.4 | ||||||
| Sequence conflict | 487 | 1 | S → P in BAC04248. Ref.4 | ||||||
| Sequence conflict | 714 | 1 | N → S in BAB55223. Ref.4 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The OSBP-related protein family in humans." Lehto M., Laitinen S., Chinetti G., Johansson M., Ehnholm C., Staels B., Ikonen E., Olkkonen V.M. J. Lipid Res. 42:1203-1213(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). |
| [2] | "A family of 12 human genes containing oxysterol-binding domains." Jaworski C.J., Moreira E., Li A., Lee R., Rodriguez I.R. Genomics 78:185-196(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). |
| [3] | Guo J.H., Zan Q., Yu L. Submitted (DEC-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). |
| [4] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 3 AND 4), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 195-934 (ISOFORM 1). Tissue: Placenta, Teratocarcinoma and Trachea. |
| [5] | Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S., Ohara O., Nagase T., Kikuno R.F. Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 5). Tissue: Brain. |
| [6] | "Generation and annotation of the DNA sequences of human chromosomes 2 and 4." Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H., Minx P., Wagner-McPherson C., Layman D., Wylie K., Sekhon M., Becker M.C., Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Kremitzki C., Oddy L., Du H. Wilson R.K.Nature 434:724-731(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [7] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [8] | "ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage." Matsuoka S., Ballif B.A., Smogorzewska A., McDonald E.R. III, Hurov K.E., Luo J., Bakalarski C.E., Zhao Z., Solimini N., Lerenthal Y., Shiloh Y., Gygi S.P., Elledge S.J. Science 316:1160-1166(2007) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Embryonic kidney. |
| [9] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [10] | "Large-scale proteomics analysis of the human kinome." Oppermann F.S., Gnad F., Olsen J.V., Hornberger R., Greff Z., Keri G., Mann M., Daub H. Mol. Cell. Proteomics 8:1751-1764(2009) [PubMed] [Europe PMC] [Abstract] Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT SER-2, MASS SPECTROMETRY, CLEAVAGE OF INITIATOR METHIONINE. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF323728 mRNA. Translation: AAG53409.1. AF392448 mRNA. Translation: AAL40661.1. AF462443 mRNA. Translation: AAP97711.1. AK027600 mRNA. Translation: BAB55223.1. Different initiation. AK093902 mRNA. Translation: BAC04248.1. AK300389 mRNA. Translation: BAG62123.1. AB208898 mRNA. Translation: BAD92135.1. Different initiation. AC009948 Genomic DNA. Translation: AAX88881.1. AC011743 Genomic DNA. Translation: AAY15090.1. AC011238 Genomic DNA. No translation available. CH471058 Genomic DNA. Translation: EAX11040.1. CH471058 Genomic DNA. Translation: EAX11041.1. CH471058 Genomic DNA. Translation: EAX11042.1. CH471058 Genomic DNA. Translation: EAX11043.1. |
| IPI | IPI00167804. IPI00220568. IPI00385134. IPI00789184. IPI00908339. |
| RefSeq | NP_001188409.1. NM_001201480.1. NP_001188410.1. NM_001201481.1. NP_001188411.1. NM_001201482.1. NP_115912.1. NM_032523.3. NP_665682.1. NM_145739.2. |
| UniGene | Hs.318775. |
3D structure databases | |
| ProteinModelPortal | Q9BZF3. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9BZF3. 2 interactions. |
PTM databases | |
| PhosphoSite | Q9BZF3. |
Polymorphism databases | |
| DMDM | 20139133. |
Proteomic databases | |
| PaxDb | Q9BZF3. |
| PRIDE | Q9BZF3. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000190611; ENSP00000190611; ENSG00000079156. ENST00000315022; ENSP00000318723; ENSG00000079156. ENST00000359685; ENSP00000352713; ENSG00000079156. ENST00000392505; ENSP00000376293; ENSG00000079156. ENST00000409045; ENSP00000387248; ENSG00000079156. ENST00000409631; ENSP00000386885; ENSG00000079156. |
| GeneID | 114880. |
| KEGG | hsa:114880. |
| UCSC | uc002ulx.3. human. uc002uly.3. human. uc002ulz.3. human. uc002uma.3. human. uc010zfe.2. human. |
Organism-specific databases | |
| CTD | 114880. |
| GeneCards | GC02P179023. |
| HGNC | HGNC:16388. OSBPL6. |
| HPA | HPA032131. |
| MIM | 606734. gene. |
| neXtProt | NX_Q9BZF3. |
| PharmGKB | PA32830. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG281324. |
| HOVERGEN | HBG058934. |
| OMA | VTIRNTK. |
| OrthoDB | EOG49S65P. |
Gene expression databases | |
| ArrayExpress | Q9BZF3. |
| Bgee | Q9BZF3. |
| CleanEx | HS_OSBPL6. |
| Genevestigator | Q9BZF3. |
| GermOnline | ENSG00000079156. Homo sapiens. |
Family and domain databases | |
| Gene3D | 2.30.29.30. 1 hit. |
| InterPro | IPR000648. Oxysterol-bd. IPR018494. Oxysterol-bd_CS. IPR011993. PH_like_dom. IPR001849. Pleckstrin_homology. [Graphical view] |
| PANTHER | PTHR10972. PTHR10972. 1 hit. |
| Pfam | PF01237. Oxysterol_BP. 1 hit. [Graphical view] |
| SMART | SM00233. PH. 1 hit. [Graphical view] |
| PROSITE | PS01013. OSBP. 1 hit. PS50003. PH_DOMAIN. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChiTaRS | OSBPL6. human. |
| GenomeRNAi | 114880. |
| NextBio | 79353. |
| SOURCE | Search... |
Entry information
| Entry name | OSBL6_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9BZF3 Secondary accession number(s): B4DTW1 Q96SR1 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 2 Human chromosome 2: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
