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Q9BZA7 (PC11X_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 105. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (5) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Protocadherin-11 X-linked

Short name=Protocadherin-11
Alternative name(s):
Protocadherin on the X chromosome
Short name=PCDH-X
Protocadherin-S
Gene names
Name:PCDH11X
Synonyms:KIAA1326, PCDH11, PCDHX
OrganismHomo sapiens (Human) [Reference proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length1347 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Potential calcium-dependent cell-adhesion protein.

Subcellular location

Cell membrane; Single-pass type I membrane protein Potential.

Tissue specificity

Expressed strongly in fetal brain and brain (cortex, amygdala, thalamus, substantia nigra, hippocampus, caudate nucleus and corpus callosum). Expressed at low level in testis. Ref.1 Ref.2

Sequence similarities

Contains 7 cadherin domains.

Alternative products

This entry describes 8 isoforms produced by alternative splicing. [Align] [Select]

Note: Additional isoforms seem to exist.
Isoform 1 (identifier: Q9BZA7-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Isoform 2 (identifier: Q9BZA7-2)

The sequence of this isoform differs from the canonical sequence as follows:
     1012-1025: PMKEVVRSCTPMKE → TDSRTSTIEICSEI
     1026-1347: Missing.
Isoform 3 (identifier: Q9BZA7-3)

The sequence of this isoform differs from the canonical sequence as follows:
     1039-1048: Missing.
Isoform 4 (identifier: Q9BZA7-4)

The sequence of this isoform differs from the canonical sequence as follows:
     1039-1048: Missing.
     1116-1123: Missing.
Isoform 5 (identifier: Q9BZA7-5)

The sequence of this isoform differs from the canonical sequence as follows:
     1012-1048: Missing.
Isoform 6 (identifier: Q9BZA7-6)

The sequence of this isoform differs from the canonical sequence as follows:
     1049-1065: SQRRVTFHLPEGSQESS → TVLTSSSPSAMTLSYLD
     1066-1347: Missing.
Isoform 7 (identifier: Q9BZA7-7)

Also known as: Protocadherin-Xa;

The sequence of this isoform differs from the canonical sequence as follows:
     1012-1021: PMKEVVRSCT → VGIQVSNTTF
     1022-1347: Missing.
Note: No experimental confirmation available.
Isoform 8 (identifier: Q9BZA7-8)

The sequence of this isoform differs from the canonical sequence as follows:
     1116-1123: Missing.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2323 Potential
Chain24 – 13471324Protocadherin-11 X-linked
PRO_0000232758

Regions

Topological domain24 – 812789Extracellular Potential
Transmembrane813 – 83321Helical; Potential
Topological domain834 – 1347514Cytoplasmic Potential
Domain26 – 139114Cadherin 1
Domain140 – 249110Cadherin 2
Domain250 – 355106Cadherin 3
Domain362 – 466105Cadherin 4
Domain467 – 570104Cadherin 5
Domain571 – 673103Cadherin 6
Domain677 – 795119Cadherin 7
Compositional bias868 – 8758Poly-Lys

Amino acid modifications

Glycosylation271N-linked (GlcNAc...) Potential
Glycosylation481N-linked (GlcNAc...) Potential
Glycosylation541N-linked (GlcNAc...) Potential
Glycosylation3441N-linked (GlcNAc...) Potential
Glycosylation5531N-linked (GlcNAc...) Potential
Glycosylation7731N-linked (GlcNAc...) Potential

Natural variations

Alternative sequence1012 – 104837Missing in isoform 5.
VSP_017979
Alternative sequence1012 – 102514PMKEV…TPMKE → TDSRTSTIEICSEI in isoform 2.
VSP_017980
Alternative sequence1012 – 102110PMKEVVRSCT → VGIQVSNTTF in isoform 7.
VSP_017981
Alternative sequence1022 – 1347326Missing in isoform 7.
VSP_017982
Alternative sequence1026 – 1347322Missing in isoform 2.
VSP_017983
Alternative sequence1039 – 104810Missing in isoform 3 and isoform 4.
VSP_017984
Alternative sequence1049 – 106517SQRRV…SQESS → TVLTSSSPSAMTLSYLD in isoform 6.
VSP_017985
Alternative sequence1066 – 1347282Missing in isoform 6.
VSP_017986
Alternative sequence1116 – 11238Missing in isoform 8 and isoform 4.
VSP_017987
Natural variant421D → G in a colorectal cancer sample; somatic mutation. Ref.9
VAR_036109
Natural variant10181R → Q.
Corresponds to variant rs4252205 [ dbSNP | Ensembl ].
VAR_048575

Experimental info

Sequence conflict242 – 2443TND → PNA in AAK82655. Ref.4
Sequence conflict242 – 2443TND → PNA in AAK82656. Ref.4
Sequence conflict2521T → P in AAK82655. Ref.4
Sequence conflict2521T → P in AAK82656. Ref.4

Sequences

Sequence LengthMass (Da)Tools
Isoform 1 [UniParc].

Last modified June 1, 2001. Version 1.
Checksum: 0227FA6C521FDA84

FASTA1,347147,558
        10         20         30         40         50         60 
MDLLSGTYIF AVLLACVVFH SGAQEKNYTI REEMPENVLI GDLLKDLNLS LIPNKSLTTA 

        70         80         90        100        110        120 
MQFKLVYKTG DVPLIRIEED TGEIFTTGAR IDREKLCAGI PRDEHCFYEV EVAILPDEIF 

       130        140        150        160        170        180 
RLVKIRFLIE DINDNAPLFP ATVINISIPE NSAINSKYTL PAAVDPDVGI NGVQNYELIK 

       190        200        210        220        230        240 
SQNIFGLDVI ETPEGDKMPQ LIVQKELDRE EKDTYVMKVK VEDGGFPQRS STAILQVSVT 

       250        260        270        280        290        300 
DTNDNHPVFK ETEIEVSIPE NAPVGTSVTQ LHATDADIGE NAKIHFSFSN LVSNIARRLF 

       310        320        330        340        350        360 
HLNATTGLIT IKEPLDREET PNHKLLVLAS DGGLMPARAM VLVNVTDVND NVPSIDIRYI 

       370        380        390        400        410        420 
VNPVNDTVVL SENIPLNTKI ALITVTDKDA DHNGRVTCFT DHEIPFRLRP VFSNQFLLET 

       430        440        450        460        470        480 
AAYLDYESTK EYAIKLLAAD AGKPPLNQSA MLFIKVKDEN DNAPVFTQSF VTVSIPENNS 

       490        500        510        520        530        540 
PGIQLTKVSA MDADSGPNAK INYLLGPDAP PEFSLDCRTG MLTVVKKLDR EKEDKYLFTI 

       550        560        570        580        590        600 
LAKDNGVPPL TSNVTVFVSI IDQNDNSPVF THNEYNFYVP ENLPRHGTVG LITVTDPDYG 

       610        620        630        640        650        660 
DNSAVTLSIL DENDDFTIDS QTGVIRPNIS FDREKQESYT FYVKAEDGGR VSRSSSAKVT 

       670        680        690        700        710        720 
INVVDVNDNK PVFIVPPSNC SYELVLPSTN PGTVVFQVIA VDNDTGMNAE VRYSIVGGNT 

       730        740        750        760        770        780 
RDLFAIDQET GNITLMEKCD VTDLGLHRVL VKANDLGQPD SLFSVVIVNL FVNESVTNAT 

       790        800        810        820        830        840 
LINELVRKST EAPVTPNTEI ADVSSPTSDY VKILVAAVAG TITVVVVIFI TAVVRCRQAP 

       850        860        870        880        890        900 
HLKAAQKNKQ NSEWATPNPE NRQMIMMKKK KKKKKHSPKN LLLNFVTIEE TKADDVDSDG 

       910        920        930        940        950        960 
NRVTLDLPID LEEQTMGKYN WVTTPTTFKP DSPDLARHYK SASPQPAFQI QPETPLNSKH 

       970        980        990       1000       1010       1020 
HIIQELPLDN TFVACDSISK CSSSSSDPYS VSDCGYPVTT FEVPVSVHTR PPMKEVVRSC 

      1030       1040       1050       1060       1070       1080 
TPMKESTTME IWIHPQPQRK SEGKVAGKSQ RRVTFHLPEG SQESSSDGGL GDHDAGSLTS 

      1090       1100       1110       1120       1130       1140 
TSHGLPLGYP QEEYFDRATP SNRTEGDGNS DPESTFIPGL KKAAEITVQP TVEEASDNCT 

      1150       1160       1170       1180       1190       1200 
QECLIYGHSD ACWMPASLDH SSSSQAQASA LCHSPPLSQA STQHHSPRVT QTIALCHSPP 

      1210       1220       1230       1240       1250       1260 
VTQTIALCHS PPPIQVSALH HSPPLVQATA LHHSPPSAQA SALCYSPPLA QAAAISHSSP 

      1270       1280       1290       1300       1310       1320 
LPQVIALHRS QAQSSVSLQQ GWVQGADGLC SVDQGVQGSA TSQFYTMSER LHPSDDSIKV 

      1330       1340 
IPLTTFTPRQ QARPSRGDSP IMEEHPL 

« Hide

Isoform 2 [UniParc].

Checksum: 51EE095ED7035A10
Show »

FASTA1,025113,215
Isoform 3 [UniParc].

Checksum: A96D3B41173C8508
Show »

FASTA1,337146,517
Isoform 4 [UniParc].

Checksum: DA7DC585324AD261
Show »

FASTA1,329145,662
Isoform 5 [UniParc].

Checksum: 948FE29C9EA7D312
Show »

FASTA1,310143,350
Isoform 6 [UniParc].

Checksum: 71AB11952A3EEA81
Show »

FASTA1,065117,642
Isoform 7 (Protocadherin-Xa) [UniParc].

Checksum: 9F4471F5C597F902
Show »

FASTA1,021112,726
Isoform 8 [UniParc].

Checksum: CD1D563B7D8FE105
Show »

FASTA1,339146,703

References

« Hide 'large scale' references
[1]"Identification of a novel protocadherin gene (PCDH11) on the human XY homology region in Xq21.3."
Yoshida K., Sugano S.
Genomics 62:540-543(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 7), TISSUE SPECIFICITY.
Tissue: Brain.
[2]"Conservation of PCDHX in mammals; expression of human X/Y genes predominantly in brain."
Blanco P., Sargent C.A., Boucher C., Mitchell M., Affara N.
Mamm. Genome 11:906-914(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), TISSUE SPECIFICITY.
Tissue: Brain.
[3]"The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes."
Skaletsky H., Kuroda-Kawaguchi T., Minx P.J., Cordum H.S., Hillier L.W., Brown L.G., Repping S., Pyntikova T., Ali J., Bieri T., Chinwalla A., Delehaunty A., Delehaunty K., Du H., Fewell G., Fulton L., Fulton R., Graves T.A. expand/collapse author list , Hou S.-F., Latrielle P., Leonard S., Mardis E., Maupin R., McPherson J., Miner T., Nash W., Nguyen C., Ozersky P., Pepin K., Rock S., Rohlfing T., Scott K., Schultz B., Strong C., Tin-Wollam A., Yang S.-P., Waterston R.H., Wilson R.K., Rozen S., Page D.C.
Nature 423:825-837(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 3).
Tissue: Brain.
[4]"Identification and cloning of a human chromosome X-linked protocadherin gene with seven extracellular domains and an unusual large cytoplasmic domain."
Kools P.F.J., van Roy F.
Submitted (NOV-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 5).
[5]"Delta-protocadherins: a subfamily of protocadherins expressed differentially in the mouse nervous system."
Vanhalst K., Kools P., Staes K., van Roy F., Redies C.
Submitted (DEC-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 4; 5; 6 AND 8).
Tissue: Fetal brain.
[6]"The DNA sequence of the human X chromosome."
Ross M.T., Grafham D.V., Coffey A.J., Scherer S., McLay K., Muzny D., Platzer M., Howell G.R., Burrows C., Bird C.P., Frankish A., Lovell F.L., Howe K.L., Ashurst J.L., Fulton R.S., Sudbrak R., Wen G., Jones M.C. expand/collapse author list , Hurles M.E., Andrews T.D., Scott C.E., Searle S., Ramser J., Whittaker A., Deadman R., Carter N.P., Hunt S.E., Chen R., Cree A., Gunaratne P., Havlak P., Hodgson A., Metzker M.L., Richards S., Scott G., Steffen D., Sodergren E., Wheeler D.A., Worley K.C., Ainscough R., Ambrose K.D., Ansari-Lari M.A., Aradhya S., Ashwell R.I., Babbage A.K., Bagguley C.L., Ballabio A., Banerjee R., Barker G.E., Barlow K.F., Barrett I.P., Bates K.N., Beare D.M., Beasley H., Beasley O., Beck A., Bethel G., Blechschmidt K., Brady N., Bray-Allen S., Bridgeman A.M., Brown A.J., Brown M.J., Bonnin D., Bruford E.A., Buhay C., Burch P., Burford D., Burgess J., Burrill W., Burton J., Bye J.M., Carder C., Carrel L., Chako J., Chapman J.C., Chavez D., Chen E., Chen G., Chen Y., Chen Z., Chinault C., Ciccodicola A., Clark S.Y., Clarke G., Clee C.M., Clegg S., Clerc-Blankenburg K., Clifford K., Cobley V., Cole C.G., Conquer J.S., Corby N., Connor R.E., David R., Davies J., Davis C., Davis J., Delgado O., Deshazo D., Dhami P., Ding Y., Dinh H., Dodsworth S., Draper H., Dugan-Rocha S., Dunham A., Dunn M., Durbin K.J., Dutta I., Eades T., Ellwood M., Emery-Cohen A., Errington H., Evans K.L., Faulkner L., Francis F., Frankland J., Fraser A.E., Galgoczy P., Gilbert J., Gill R., Gloeckner G., Gregory S.G., Gribble S., Griffiths C., Grocock R., Gu Y., Gwilliam R., Hamilton C., Hart E.A., Hawes A., Heath P.D., Heitmann K., Hennig S., Hernandez J., Hinzmann B., Ho S., Hoffs M., Howden P.J., Huckle E.J., Hume J., Hunt P.J., Hunt A.R., Isherwood J., Jacob L., Johnson D., Jones S., de Jong P.J., Joseph S.S., Keenan S., Kelly S., Kershaw J.K., Khan Z., Kioschis P., Klages S., Knights A.J., Kosiura A., Kovar-Smith C., Laird G.K., Langford C., Lawlor S., Leversha M., Lewis L., Liu W., Lloyd C., Lloyd D.M., Loulseged H., Loveland J.E., Lovell J.D., Lozado R., Lu J., Lyne R., Ma J., Maheshwari M., Matthews L.H., McDowall J., McLaren S., McMurray A., Meidl P., Meitinger T., Milne S., Miner G., Mistry S.L., Morgan M., Morris S., Mueller I., Mullikin J.C., Nguyen N., Nordsiek G., Nyakatura G., O'dell C.N., Okwuonu G., Palmer S., Pandian R., Parker D., Parrish J., Pasternak S., Patel D., Pearce A.V., Pearson D.M., Pelan S.E., Perez L., Porter K.M., Ramsey Y., Reichwald K., Rhodes S., Ridler K.A., Schlessinger D., Schueler M.G., Sehra H.K., Shaw-Smith C., Shen H., Sheridan E.M., Shownkeen R., Skuce C.D., Smith M.L., Sotheran E.C., Steingruber H.E., Steward C.A., Storey R., Swann R.M., Swarbreck D., Tabor P.E., Taudien S., Taylor T., Teague B., Thomas K., Thorpe A., Timms K., Tracey A., Trevanion S., Tromans A.C., d'Urso M., Verduzco D., Villasana D., Waldron L., Wall M., Wang Q., Warren J., Warry G.L., Wei X., West A., Whitehead S.L., Whiteley M.N., Wilkinson J.E., Willey D.L., Williams G., Williams L., Williamson A., Williamson H., Wilming L., Woodmansey R.L., Wray P.W., Yen J., Zhang J., Zhou J., Zoghbi H., Zorilla S., Buck D., Reinhardt R., Poustka A., Rosenthal A., Lehrach H., Meindl A., Minx P.J., Hillier L.W., Willard H.F., Wilson R.K., Waterston R.H., Rice C.M., Vaudin M., Coulson A., Nelson D.L., Weinstock G., Sulston J.E., Durbin R.M., Hubbard T., Gibbs R.A., Beck S., Rogers J., Bentley D.R.
Nature 434:325-337(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[7]"Protocadherin X (PCDHX) and Y (PCDHY) genes; multiple mRNA isoforms encoding variant signal peptides and cytoplasmic domains."
Blanco-Arias P., Sargent C.A., Affara N.A.
Mamm. Genome 15:41-52(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 1-1011; 1049-1114 AND 1124-1347, NUCLEOTIDE SEQUENCE [MRNA] OF 181-1347 (ISOFORM 7), ALTERNATIVE SPLICING.
[8]"Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro."
Nagase T., Kikuno R., Ishikawa K., Hirosawa M., Ohara O.
DNA Res. 7:65-73(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 924-1347.
Tissue: Brain.
[9]"The consensus coding sequences of human breast and colorectal cancers."
Sjoeblom T., Jones S., Wood L.D., Parsons D.W., Lin J., Barber T.D., Mandelker D., Leary R.J., Ptak J., Silliman N., Szabo S., Buckhaults P., Farrell C., Meeh P., Markowitz S.D., Willis J., Dawson D., Willson J.K.V. expand/collapse author list , Gazdar A.F., Hartigan J., Wu L., Liu C., Parmigiani G., Park B.H., Bachman K.E., Papadopoulos N., Vogelstein B., Kinzler K.W., Velculescu V.E.
Science 314:268-274(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: VARIANT [LARGE SCALE ANALYSIS] GLY-42.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AB026187 mRNA. Translation: BAA90765.1.
AJ276804 mRNA. Translation: CAC13123.1.
AF332218 mRNA. Translation: AAK13470.1.
AF332219 mRNA. Translation: AAK13471.1.
AF206516 mRNA. Translation: AAK82655.1.
AF217288 mRNA. Translation: AAK82656.1.
AY861432 mRNA. Translation: AAX56122.1.
AY861433 mRNA. Translation: AAX56123.1.
AY861434 mRNA. Translation: AAX56124.1.
AY861435 mRNA. Translation: AAX56125.1.
AL121869, AC004388, AL133274 Genomic DNA. Translation: CAI41412.1.
AL121869 expand/collapse EMBL AC list , AC004388, AL133274, AL133321 Genomic DNA. Translation: CAI41413.1.
AL121869 expand/collapse EMBL AC list , AC004388, AL133274, AL133321 Genomic DNA. Translation: CAI41414.1.
AL133321 expand/collapse EMBL AC list , AC004388, AL121869, AL133274 Genomic DNA. Translation: CAI41435.1.
AL133321 expand/collapse EMBL AC list , AC004388, AL121869, AL133274 Genomic DNA. Translation: CAI41436.1.
AL133274, AC004388, AL121869 Genomic DNA. Translation: CAI41629.1.
AL133274 expand/collapse EMBL AC list , AC004388, AL121869, AL133321 Genomic DNA. Translation: CAI41630.1.
AL133274 expand/collapse EMBL AC list , AC004388, AL121869, AL133321 Genomic DNA. Translation: CAI41631.1.
AJ564931 mRNA. Translation: CAD92410.1.
AJ564932 mRNA. Translation: CAD92411.1.
AJ564933 mRNA. Translation: CAD92412.1.
AJ564934 mRNA. Translation: CAD92413.1.
AJ564935 mRNA. Translation: CAD92414.1.
AJ564936 mRNA. Translation: CAD92415.1.
AJ564942 mRNA. Translation: CAD92421.1.
AJ564945 mRNA. Translation: CAD92424.1.
AJ564946 mRNA. Translation: CAD92425.1.
AJ564947 mRNA. Translation: CAD92426.1.
AB037747 mRNA. Translation: BAA92564.1.
RefSeqNP_001161832.1. NM_001168360.1.
NP_001161833.1. NM_001168361.1.
NP_001161834.1. NM_001168362.1.
NP_001161835.1. NM_001168363.1.
NP_055337.1. NM_014522.1.
NP_116749.1. NM_032967.2.
NP_116750.1. NM_032968.3.
NP_116751.1. NM_032969.3.
UniGeneHs.655673.

3D structure databases

ProteinModelPortalQ9BZA7.
SMRQ9BZA7. Positions 25-782.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid118142. 1 interaction.
IntActQ9BZA7. 1 interaction.

PTM databases

PhosphoSiteQ9BZA7.

Polymorphism databases

DMDM74761344.

Proteomic databases

PaxDbQ9BZA7.
PRIDEQ9BZA7.

Protocols and materials databases

DNASU27328.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000361655; ENSP00000355105; ENSG00000102290. [Q9BZA7-4]
ENST00000361724; ENSP00000355040; ENSG00000102290. [Q9BZA7-7]
ENST00000373088; ENSP00000362180; ENSG00000102290. [Q9BZA7-5]
ENST00000373094; ENSP00000362186; ENSG00000102290. [Q9BZA7-1]
ENST00000373097; ENSP00000362189; ENSG00000102290. [Q9BZA7-3]
ENST00000395337; ENSP00000378746; ENSG00000102290. [Q9BZA7-2]
ENST00000406881; ENSP00000384758; ENSG00000102290. [Q9BZA7-8]
ENST00000504220; ENSP00000423762; ENSG00000102290. [Q9BZA7-6]
GeneID27328.
KEGGhsa:27328.
UCSCuc004efh.2. human. [Q9BZA7-2]
uc004efj.1. human. [Q9BZA7-7]
uc004efk.2. human. [Q9BZA7-1]
uc004efl.2. human. [Q9BZA7-3]
uc004efm.2. human. [Q9BZA7-8]
uc004efn.2. human. [Q9BZA7-4]
uc004efo.2. human. [Q9BZA7-5]
uc010nmv.2. human. [Q9BZA7-6]

Organism-specific databases

CTD27328.
GeneCardsGC0XP091034.
H-InvDBHIX0176577.
HGNCHGNC:8656. PCDH11X.
HPAHPA000432.
MIM300246. gene.
neXtProtNX_Q9BZA7.
PharmGKBPA32996.
HUGESearch...
GenAtlasSearch...

Phylogenomic databases

eggNOGNOG145470.
HOVERGENHBG053523.
InParanoidQ9BZA7.
KOK16498.
OMACDSISKC.
OrthoDBEOG7WMCHN.
PhylomeDBQ9BZA7.
TreeFamTF320624.

Gene expression databases

ArrayExpressQ9BZA7.
BgeeQ9BZA7.
GenevestigatorQ9BZA7.

Family and domain databases

Gene3D2.60.40.60. 6 hits.
InterProIPR002126. Cadherin.
IPR015919. Cadherin-like.
IPR020894. Cadherin_CS.
IPR013164. Cadherin_N.
IPR013585. Protocadherin.
[Graphical view]
PfamPF00028. Cadherin. 6 hits.
PF08266. Cadherin_2. 1 hit.
PF08374. Protocadherin. 1 hit.
[Graphical view]
PRINTSPR00205. CADHERIN.
SMARTSM00112. CA. 6 hits.
[Graphical view]
SUPFAMSSF49313. SSF49313. 6 hits.
PROSITEPS00232. CADHERIN_1. 5 hits.
PS50268. CADHERIN_2. 7 hits.
[Graphical view]
ProtoNetSearch...

Other

GeneWikiPCDH11X.
GenomeRNAi27328.
NextBio50358.
PROQ9BZA7.
SOURCESearch...

Entry information

Entry namePC11X_HUMAN
AccessionPrimary (citable) accession number: Q9BZA7
Secondary accession number(s): A6NIQ4 expand/collapse secondary AC list , Q2TJH0, Q2TJH1, Q2TJH3, Q5JVZ0, Q70LR8, Q70LS7, Q70LS8, Q70LS9, Q70LT7, Q70LT8, Q70LT9, Q70LU0, Q70LU1, Q96RV4, Q96RW0, Q9BZA6, Q9H4E0, Q9P2M0, Q9P2X5
Entry history
Integrated into UniProtKB/Swiss-Prot: April 18, 2006
Last sequence update: June 1, 2001
Last modified: April 16, 2014
This is version 105 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

SIMILARITY comments

Index of protein domains and families

MIM cross-references

Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

Human polymorphisms and disease mutations

Index of human polymorphisms and disease mutations

Human entries with polymorphisms or disease mutations

List of human entries with polymorphisms or disease mutations

Human chromosome X

Human chromosome X: entries, gene names and cross-references to MIM