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Protein

Sterile alpha motif domain-containing protein 10

Gene

SAMD10

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Enzyme and pathway databases

SignaLinkiQ9BYL1.

Names & Taxonomyi

Protein namesi
Recommended name:
Sterile alpha motif domain-containing protein 10
Short name:
SAM domain-containing protein 10
Gene namesi
Name:SAMD10
Synonyms:C20orf136
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 20

Organism-specific databases

EuPathDBiHostDB:ENSG00000130590.13.
HGNCiHGNC:16129. SAMD10.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000130590.
PharmGKBiPA25678.

Polymorphism and mutation databases

BioMutaiSAMD10.
DMDMi26392486.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000975681 – 202Sterile alpha motif domain-containing protein 10Add BLAST202

Proteomic databases

PaxDbiQ9BYL1.
PeptideAtlasiQ9BYL1.
PRIDEiQ9BYL1.

PTM databases

iPTMnetiQ9BYL1.
PhosphoSitePlusiQ9BYL1.

Expressioni

Gene expression databases

BgeeiENSG00000130590.
CleanExiHS_SAMD10.
ExpressionAtlasiQ9BYL1. baseline and differential.
GenevisibleiQ9BYL1. HS.

Organism-specific databases

HPAiHPA040973.

Interactioni

Protein-protein interaction databases

BioGridi126661. 1 interactor.
STRINGi9606.ENSP00000358902.

Structurei

3D structure databases

ProteinModelPortaliQ9BYL1.
SMRiQ9BYL1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini118 – 184SAMPROSITE-ProRule annotationAdd BLAST67

Phylogenomic databases

eggNOGiENOG410IJ7W. Eukaryota.
ENOG41128Z9. LUCA.
GeneTreeiENSGT00390000008161.
HOGENOMiHOG000132938.
HOVERGENiHBG079163.
InParanoidiQ9BYL1.
OMAiPHNYLIY.
OrthoDBiEOG091G0YT6.
PhylomeDBiQ9BYL1.
TreeFamiTF325918.

Family and domain databases

InterProiView protein in InterPro
IPR001660. SAM.
IPR013761. SAM/pointed_sf.
PfamiView protein in Pfam
PF07647. SAM_2. 1 hit.
SMARTiView protein in SMART
SM00454. SAM. 1 hit.
SUPFAMiSSF47769. SSF47769. 1 hit.
PROSITEiView protein in PROSITE
PS50105. SAM_DOMAIN. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9BYL1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFTELRSKLS PPRGRAGAVR AGFGERRDVD ATAHFSFCRT LLEHTVSAES
60 70 80 90 100
IPCHLPRTPG TSLTWHDSRS QRAASSRPIK LLQQPGTDTP QGRLYSDHYG
110 120 130 140 150
LYHTSPSLGG LTRPVVLWSQ QDVCKWLKKH CPHNYLVYVE AFSQHAITGR
160 170 180 190 200
ALLRLNAEKL QRMGLAQEAQ RQEVLQQVLR LQVREEGRSL QLLSQASFGK

MS
Length:202
Mass (Da):22,770
Last modified:June 1, 2001 - v1
Checksum:iDF2678F090A3E946
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL118506 Genomic DNA. No translation available.
BC067362 mRNA. Translation: AAH67362.1.
CCDSiCCDS13549.1.
RefSeqiNP_542188.1. NM_080621.4.
XP_016883160.1. XM_017027671.1.
UniGeneiHs.27189.

Genome annotation databases

EnsembliENST00000369886; ENSP00000358902; ENSG00000130590.
GeneIDi140700.
KEGGihsa:140700.
UCSCiuc002yhm.2. human.

Similar proteinsi

Entry informationi

Entry nameiSAM10_HUMAN
AccessioniPrimary (citable) accession number: Q9BYL1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 6, 2002
Last sequence update: June 1, 2001
Last modified: November 22, 2017
This is version 113 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 20
    Human chromosome 20: entries, gene names and cross-references to MIM