Q9BYL1 (SAM10_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Sterile alpha motif domain-containing protein 10
Short name=SAM domain-containing protein 10

Gene names

Name:	SAMD10
Synonyms:	C20orf136

Organism

Homo sapiens (Human)

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length	202 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 SAM (sterile alpha motif) domain.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 202	202	Sterile alpha motif domain-containing protein 10		PRO_0000097568
Regions
	Domain	118 – 184	67	SAM

Sequences

	Sequence		Length	Mass (Da)
	Q9BYL1 [UniParc]. Last modified June 1, 2001. Version 1. Checksum: DF2678F090A3E946	FASTA	202	22,770
	10 20 30 40 50 60 MFTELRSKLS PPRGRAGAVR AGFGERRDVD ATAHFSFCRT LLEHTVSAES IPCHLPRTPG 70 80 90 100 110 120 TSLTWHDSRS QRAASSRPIK LLQQPGTDTP QGRLYSDHYG LYHTSPSLGG LTRPVVLWSQ 130 140 150 160 170 180 QDVCKWLKKH CPHNYLVYVE AFSQHAITGR ALLRLNAEKL QRMGLAQEAQ RQEVLQQVLR 190 200 LQVREEGRSL QLLSQASFGK MS

References

[1]

"The DNA sequence and comparative analysis of human chromosome 20." Deloukas P., Matthews L.H., Ashurst J.L., Burton J., Gilbert J.G.R., Jones M., Stavrides G., Almeida J.P., Babbage A.K., Bagguley C.L., Bailey J., Barlow K.F., Bates K.N., Beard L.M., Beare D.M., Beasley O.P., Bird C.P., Blakey S.E. , Bridgeman A.M., Brown A.J., Buck D., Burrill W.D., Butler A.P., Carder C., Carter N.P., Chapman J.C., Clamp M., Clark G., Clark L.N., Clark S.Y., Clee C.M., Clegg S., Cobley V.E., Collier R.E., Connor R.E., Corby N.R., Coulson A., Coville G.J., Deadman R., Dhami P.D., Dunn M., Ellington A.G., Frankland J.A., Fraser A., French L., Garner P., Grafham D.V., Griffiths C., Griffiths M.N.D., Gwilliam R., Hall R.E., Hammond S., Harley J.L., Heath P.D., Ho S., Holden J.L., Howden P.J., Huckle E., Hunt A.R., Hunt S.E., Jekosch K., Johnson C.M., Johnson D., Kay M.P., Kimberley A.M., King A., Knights A., Laird G.K., Lawlor S., Lehvaeslaiho M.H., Leversha M.A., Lloyd C., Lloyd D.M., Lovell J.D., Marsh V.L., Martin S.L., McConnachie L.J., McLay K., McMurray A.A., Milne S.A., Mistry D., Moore M.J.F., Mullikin J.C., Nickerson T., Oliver K., Parker A., Patel R., Pearce T.A.V., Peck A.I., Phillimore B.J.C.T., Prathalingam S.R., Plumb R.W., Ramsay H., Rice C.M., Ross M.T., Scott C.E., Sehra H.K., Shownkeen R., Sims S., Skuce C.D., Smith M.L., Soderlund C., Steward C.A., Sulston J.E., Swann R.M., Sycamore N., Taylor R., Tee L., Thomas D.W., Thorpe A., Tracey A., Tromans A.C., Vaudin M., Wall M., Wallis J.M., Whitehead S.L., Whittaker P., Willey D.L., Williams L., Williams S.A., Wilming L., Wray P.W., Hubbard T., Durbin R.M., Bentley D.R., Beck S., Rogers J. Nature 414:865-871(2001) [PubMed: 11780052] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

[2]

"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Ovary.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AL118506 Genomic DNA. Translation: CAC28315.1. BC067362 mRNA. Translation: AAH67362.1.
IPI	IPI00000974.
RefSeq	NP_542188.1. NM_080621.4.
UniGene	Hs.27189.
3D structure databases
ProteinModelPortal	Q9BYL1.
SMR	Q9BYL1. Positions 84-194.
ModBase	Search...
Protein-protein interaction databases
STRING	Q9BYL1.
PTM databases
PhosphoSite	Q9BYL1.
Polymorphism databases
DMDM	26392486.
Proteomic databases
PRIDE	Q9BYL1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENST00000369886; ENSP00000358902; ENSG00000130590.
GeneID	140700.
KEGG	hsa:140700.
UCSC	uc002yhm.2. human.
Organism-specific databases
CTD	140700.
GeneCards	GC20M062605.
HGNC	HGNC:16129. SAMD10.
HPA	HPA040973.
neXtProt	NX_Q9BYL1.
PharmGKB	PA25678.
GenAtlas	Search...
Phylogenomic databases
GeneTree	ENSGT00390000008161.
HOGENOM	HBG716069.
HOVERGEN	HBG079163.
InParanoid	Q9BYL1.
OMA	SSLTWHD.
OrthoDB	EOG4T4CWT.
PhylomeDB	Q9BYL1.
Gene expression databases
ArrayExpress	Q9BYL1.
Bgee	Q9BYL1.
CleanEx	HS_SAMD10.
Genevestigator	Q9BYL1.
GermOnline	ENSG00000130590. Homo sapiens.
Family and domain databases
InterPro	IPR001660. SAM. IPR013761. SAM/pointed. IPR011510. SAM_2. [Graphical view]
Gene3D	G3DSA:1.10.150.50. SAM_type. 1 hit.
Pfam	PF07647. SAM_2. 1 hit. [Graphical view]
SMART	SM00454. SAM. 1 hit. [Graphical view]
SUPFAM	SSF47769. SAM_homology. 1 hit.
PROSITE	PS50105. SAM_DOMAIN. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	84267.

Entry information

Entry name

SAM10_HUMAN

Accession

Primary (citable) accession number: Q9BYL1

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 6, 2002
Last sequence update:	June 1, 2001
Last modified:	January 25, 2012
This is version 72 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Chordata Protein Annotation Program

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.