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Protein

Testis-expressed sequence 13B protein

Gene

TEX13B

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Testis-expressed sequence 13B protein
Gene namesi
Name:TEX13B
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640 Componenti: Chromosome X

Organism-specific databases

HGNCiHGNC:11736. TEX13B.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA36453.

Polymorphism and mutation databases

BioMutaiTEX13B.
DMDMi50401670.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 312312Testis-expressed sequence 13B proteinPRO_0000065701Add
BLAST

Proteomic databases

MaxQBiQ9BXU2.
PaxDbiQ9BXU2.
PRIDEiQ9BXU2.

PTM databases

PhosphoSiteiQ9BXU2.

Expressioni

Tissue specificityi

Testis specific.

Gene expression databases

BgeeiQ9BXU2.
CleanExiHS_TEX13B.
GenevestigatoriQ9BXU2.

Organism-specific databases

HPAiHPA011283.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000303777.

Structurei

3D structure databases

ProteinModelPortaliQ9BXU2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG26978.
GeneTreeiENSGT00390000008046.
HOGENOMiHOG000231392.
InParanoidiQ9BXU2.
OMAiMECNEAT.
OrthoDBiEOG71ZP2K.
PhylomeDBiQ9BXU2.
TreeFamiTF337208.

Family and domain databases

InterProiIPR028193. TEX13.
[Graphical view]
PANTHERiPTHR23111:SF25. PTHR23111:SF25. 1 hit.
PfamiPF15186. TEX13. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9BXU2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALRPEDPSS GFRHGNVVAF IIEKMARHTK GPEFYFENIS LSWEEVEDKL
60 70 80 90 100
RAILEDSEVP SEVKEACTWG SLALGVRFAH RQGQLQNRRV QWLQGFAKLH
110 120 130 140 150
RSAALVLASN LTELKEQQEM ECNEATFQLQ LTETSLAEVQ RERDMLRWKL
160 170 180 190 200
FHAELAPPQG QGQATVFPGL ATAGGDWTEG AGEQEKEAVA AAGAAGGKGE
210 220 230 240 250
ERYAEAGPAP AEVLQGLGGG FRQPLGAIVA GKLHLCGAEG ERSQVSTNSH
260 270 280 290 300
VCLLWAWVHS LTGASSCPAP YLIHILIPMP FVRLLSHTQY TPFTSKGHRT
310
GSNSDAFQLG GL
Length:312
Mass (Da):33,967
Last modified:June 1, 2001 - v1
Checksum:i5AF95FA554530638
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF285598 mRNA. Translation: AAK31977.1.
AL034399 Genomic DNA. Translation: CAI42072.1.
CCDSiCCDS14534.1.
RefSeqiNP_112563.1. NM_031273.2.
UniGeneiHs.333130.

Genome annotation databases

EnsembliENST00000302917; ENSP00000303777; ENSG00000170925.
GeneIDi56156.
KEGGihsa:56156.
UCSCiuc004enn.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF285598 mRNA. Translation: AAK31977.1.
AL034399 Genomic DNA. Translation: CAI42072.1.
CCDSiCCDS14534.1.
RefSeqiNP_112563.1. NM_031273.2.
UniGeneiHs.333130.

3D structure databases

ProteinModelPortaliQ9BXU2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000303777.

PTM databases

PhosphoSiteiQ9BXU2.

Polymorphism and mutation databases

BioMutaiTEX13B.
DMDMi50401670.

Proteomic databases

MaxQBiQ9BXU2.
PaxDbiQ9BXU2.
PRIDEiQ9BXU2.

Protocols and materials databases

DNASUi56156.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000302917; ENSP00000303777; ENSG00000170925.
GeneIDi56156.
KEGGihsa:56156.
UCSCiuc004enn.1. human.

Organism-specific databases

CTDi56156.
GeneCardsiGC0XM107224.
HGNCiHGNC:11736. TEX13B.
HPAiHPA011283.
MIMi300313. gene.
neXtProtiNX_Q9BXU2.
PharmGKBiPA36453.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG26978.
GeneTreeiENSGT00390000008046.
HOGENOMiHOG000231392.
InParanoidiQ9BXU2.
OMAiMECNEAT.
OrthoDBiEOG71ZP2K.
PhylomeDBiQ9BXU2.
TreeFamiTF337208.

Miscellaneous databases

GenomeRNAii56156.
NextBioi61768.
PROiQ9BXU2.
SOURCEiSearch...

Gene expression databases

BgeeiQ9BXU2.
CleanExiHS_TEX13B.
GenevestigatoriQ9BXU2.

Family and domain databases

InterProiIPR028193. TEX13.
[Graphical view]
PANTHERiPTHR23111:SF25. PTHR23111:SF25. 1 hit.
PfamiPF15186. TEX13. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "An abundance of X-linked genes expressed in spermatogonia."
    Wang P.J., McCarrey J.R., Yang F., Page D.C.
    Nat. Genet. 27:422-426(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Tissue: Testis.
  2. "The DNA sequence of the human X chromosome."
    Ross M.T., Grafham D.V., Coffey A.J., Scherer S., McLay K., Muzny D., Platzer M., Howell G.R., Burrows C., Bird C.P., Frankish A., Lovell F.L., Howe K.L., Ashurst J.L., Fulton R.S., Sudbrak R., Wen G., Jones M.C.
    , Hurles M.E., Andrews T.D., Scott C.E., Searle S., Ramser J., Whittaker A., Deadman R., Carter N.P., Hunt S.E., Chen R., Cree A., Gunaratne P., Havlak P., Hodgson A., Metzker M.L., Richards S., Scott G., Steffen D., Sodergren E., Wheeler D.A., Worley K.C., Ainscough R., Ambrose K.D., Ansari-Lari M.A., Aradhya S., Ashwell R.I., Babbage A.K., Bagguley C.L., Ballabio A., Banerjee R., Barker G.E., Barlow K.F., Barrett I.P., Bates K.N., Beare D.M., Beasley H., Beasley O., Beck A., Bethel G., Blechschmidt K., Brady N., Bray-Allen S., Bridgeman A.M., Brown A.J., Brown M.J., Bonnin D., Bruford E.A., Buhay C., Burch P., Burford D., Burgess J., Burrill W., Burton J., Bye J.M., Carder C., Carrel L., Chako J., Chapman J.C., Chavez D., Chen E., Chen G., Chen Y., Chen Z., Chinault C., Ciccodicola A., Clark S.Y., Clarke G., Clee C.M., Clegg S., Clerc-Blankenburg K., Clifford K., Cobley V., Cole C.G., Conquer J.S., Corby N., Connor R.E., David R., Davies J., Davis C., Davis J., Delgado O., Deshazo D., Dhami P., Ding Y., Dinh H., Dodsworth S., Draper H., Dugan-Rocha S., Dunham A., Dunn M., Durbin K.J., Dutta I., Eades T., Ellwood M., Emery-Cohen A., Errington H., Evans K.L., Faulkner L., Francis F., Frankland J., Fraser A.E., Galgoczy P., Gilbert J., Gill R., Gloeckner G., Gregory S.G., Gribble S., Griffiths C., Grocock R., Gu Y., Gwilliam R., Hamilton C., Hart E.A., Hawes A., Heath P.D., Heitmann K., Hennig S., Hernandez J., Hinzmann B., Ho S., Hoffs M., Howden P.J., Huckle E.J., Hume J., Hunt P.J., Hunt A.R., Isherwood J., Jacob L., Johnson D., Jones S., de Jong P.J., Joseph S.S., Keenan S., Kelly S., Kershaw J.K., Khan Z., Kioschis P., Klages S., Knights A.J., Kosiura A., Kovar-Smith C., Laird G.K., Langford C., Lawlor S., Leversha M., Lewis L., Liu W., Lloyd C., Lloyd D.M., Loulseged H., Loveland J.E., Lovell J.D., Lozado R., Lu J., Lyne R., Ma J., Maheshwari M., Matthews L.H., McDowall J., McLaren S., McMurray A., Meidl P., Meitinger T., Milne S., Miner G., Mistry S.L., Morgan M., Morris S., Mueller I., Mullikin J.C., Nguyen N., Nordsiek G., Nyakatura G., O'dell C.N., Okwuonu G., Palmer S., Pandian R., Parker D., Parrish J., Pasternak S., Patel D., Pearce A.V., Pearson D.M., Pelan S.E., Perez L., Porter K.M., Ramsey Y., Reichwald K., Rhodes S., Ridler K.A., Schlessinger D., Schueler M.G., Sehra H.K., Shaw-Smith C., Shen H., Sheridan E.M., Shownkeen R., Skuce C.D., Smith M.L., Sotheran E.C., Steingruber H.E., Steward C.A., Storey R., Swann R.M., Swarbreck D., Tabor P.E., Taudien S., Taylor T., Teague B., Thomas K., Thorpe A., Timms K., Tracey A., Trevanion S., Tromans A.C., d'Urso M., Verduzco D., Villasana D., Waldron L., Wall M., Wang Q., Warren J., Warry G.L., Wei X., West A., Whitehead S.L., Whiteley M.N., Wilkinson J.E., Willey D.L., Williams G., Williams L., Williamson A., Williamson H., Wilming L., Woodmansey R.L., Wray P.W., Yen J., Zhang J., Zhou J., Zoghbi H., Zorilla S., Buck D., Reinhardt R., Poustka A., Rosenthal A., Lehrach H., Meindl A., Minx P.J., Hillier L.W., Willard H.F., Wilson R.K., Waterston R.H., Rice C.M., Vaudin M., Coulson A., Nelson D.L., Weinstock G., Sulston J.E., Durbin R.M., Hubbard T., Gibbs R.A., Beck S., Rogers J., Bentley D.R.
    Nature 434:325-337(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiTX13B_HUMAN
AccessioniPrimary (citable) accession number: Q9BXU2
Secondary accession number(s): Q5JYF6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: June 1, 2001
Last modified: April 29, 2015
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome X
    Human chromosome X: entries, gene names and cross-references to MIM
  2. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.