Q9BXT5 (TEX15_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
April 3, 2013.
Version 65.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Testis-expressed sequence 15 protein Alternative name(s): Cancer/testis antigen 42 Short name=CT42 | ||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 2789 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
Ontologies
| Keywords | |
|---|---|
| Coding sequence diversity | Polymorphism |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | fertilization Inferred from electronic annotation. Source: Compara homeostasis of number of cells within a tissueInferred from electronic annotation. Source: Compara male genitalia developmentInferred from electronic annotation. Source: Compara male meiosisInferred from electronic annotation. Source: Compara protein localization to chromosomeInferred from electronic annotation. Source: Compara regulation of double-strand break repair via homologous recombinationInferred from electronic annotation. Source: Compara regulation of protein localizationInferred from electronic annotation. Source: Compara spermatogenesisInferred from electronic annotation. Source: Compara synaptonemal complex assemblyInferred from electronic annotation. Source: Compara |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 2789 | 2789 | Testis-expressed sequence 15 protein | PRO_0000244483 | |||||
Regions | |||||||||
| Compositional bias | 1083 – 1161 | 79 | Ser-rich | ||||||
Natural variations | |||||||||
| Natural variant | 104 | 1 | C → R. Ref.1 Corresponds to variant rs323347 [ dbSNP | Ensembl ]. | VAR_060394 | |||||
| Natural variant | 383 | 1 | P → L. Corresponds to variant rs9297162 [ dbSNP | Ensembl ]. | VAR_060395 | |||||
| Natural variant | 1035 | 1 | I → V. Ref.1 Corresponds to variant rs323346 [ dbSNP | Ensembl ]. | VAR_060396 | |||||
| Natural variant | 1311 | 1 | N → S. Ref.1 Corresponds to variant rs323345 [ dbSNP | Ensembl ]. | VAR_060397 | |||||
| Natural variant | 1337 | 1 | L → V. Ref.1 Corresponds to variant rs323344 [ dbSNP | Ensembl ]. | VAR_060398 | |||||
| Natural variant | 1439 | 1 | K → R. Ref.1 Corresponds to variant rs323343 [ dbSNP | Ensembl ]. | VAR_060399 | |||||
| Natural variant | 2138 | 1 | D → N. Corresponds to variant rs60474250 [ dbSNP | Ensembl ]. | VAR_061711 | |||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "An abundance of X-linked genes expressed in spermatogonia." Wang P.J., McCarrey J.R., Yang F., Page D.C. Nat. Genet. 27:422-426(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, VARIANTS ARG-104; VAL-1035; SER-1311; VAL-1337 AND ARG-1439. Tissue: Testis. |
| [2] | "DNA sequence and analysis of human chromosome 8." Nusbaum C., Mikkelsen T.S., Zody M.C., Asakawa S., Taudien S., Garber M., Kodira C.D., Schueler M.G., Shimizu A., Whittaker C.A., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Yang X., Allen N.R., Anderson S., Asakawa T. Lander E.S.Nature 439:331-335(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "Five new human cancer-germline genes identified among 12 genes expressed in spermatogonia." Loriot A., Boon T., De Smet C. Int. J. Cancer 105:371-376(2003) [PubMed] [Europe PMC] [Abstract] Cited for: TISSUE SPECIFICITY, IDENTIFICATION AS A CANCER/TESTIS ANTIGEN. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF285605 mRNA. Translation: AAK31984.1. AC009314 Genomic DNA. No translation available. AC090281 Genomic DNA. No translation available. |
| IPI | IPI00010369. |
| RefSeq | NP_112561.2. NM_031271.3. |
| UniGene | Hs.458316. Hs.571446. |
3D structure databases | |
| ProteinModelPortal | Q9BXT5. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 9606.ENSP00000256246. |
PTM databases | |
| PhosphoSite | Q9BXT5. |
Polymorphism databases | |
| DMDM | 308153507. |
Proteomic databases | |
| PaxDb | Q9BXT5. |
| PRIDE | Q9BXT5. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000256246; ENSP00000256246; ENSG00000133863. |
| GeneID | 56154. |
| KEGG | hsa:56154. |
| UCSC | uc003xil.3. human. |
Organism-specific databases | |
| CTD | 56154. |
| GeneCards | GC08M030689. |
| H-InvDB | HIX0007440. |
| HGNC | HGNC:11738. TEX15. |
| HPA | HPA036800. |
| MIM | 605795. gene. |
| neXtProt | NX_Q9BXT5. |
| PharmGKB | PA36455. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG45350. |
| HOVERGEN | HBG075407. |
| InParanoid | Q9BXT5. |
| OMA | KQRFRGM. |
| OrthoDB | EOG45X7V6. |
| PhylomeDB | Q9BXT5. |
Gene expression databases | |
| ArrayExpress | Q9BXT5. |
| Bgee | Q9BXT5. |
| CleanEx | HS_TEX15. |
| Genevestigator | Q9BXT5. |
| GermOnline | ENSG00000133863. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR026616. TEX15. [Graphical view] |
| PANTHER | PTHR22380. PTHR22380. 1 hit. |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 56154. |
| NextBio | 61758. |
| SOURCE | Search... |
Entry information
| Entry name | TEX15_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9BXT5 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 8 Human chromosome 8: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |

Clusters with
