Reviewed,
UniProtKB/Swiss-Prot Q9BXJ2 (C1QT7_HUMAN)
Last modified
January 19, 2010.
Version 73.
History...
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Complement C1q tumor necrosis factor-related protein 7 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Complete proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 289 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Subcellular location | Secreted Potential. |
| Sequence similarities | Contains 1 C1q domain. Contains 1 collagen-like domain. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Secreted |
| Domain | Collagen Signal |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| None. [Check GOA] | |
Sequence annotation (Features)
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Homo sapiens complement-c1q tumor necrosis factor-related protein." Piddington C.S., Sheppard P.O., Bishop P., Lasser G.W. Submitted (DEC-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA]. |
| [2] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Trachea. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Testis. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF329839 mRNA. Translation: AAK17963.1. AK314802 mRNA. Translation: BAG37330.1. BC022187 mRNA. Translation: AAH22187.1. BC024015 mRNA. Translation: AAH24015.1. |
| IPI | IPI00784310. |
| RefSeq | NP_001128642.1. NP_001128643.1. NP_114117.1. |
| UniGene | Hs.153714 |
3D structure databases | |
| SMR | Q9BXJ2. Positions 101-133, 147-275. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q9BXJ2. |
PTM databases | |
| PhosphoSite | Q9BXJ2. |
Genome annotation databases | |
| Ensembl | ENST00000295297; ENSP00000295297; ENSG00000163145; Homo sapiens. [Genome view] ENST00000382383; ENSP00000371820; ENSG00000163145; Homo sapiens. [Genome view] ENST00000397700; ENSP00000380812; ENSG00000163145; Homo sapiens. [Genome view] ENST00000429690; ENSP00000410722; ENSG00000163145; Homo sapiens. [Genome view] ENST00000442694; ENSP00000388362; ENSG00000163145; Homo sapiens. [Genome view] ENST00000444304; ENSP00000388914; ENSG00000163145; Homo sapiens. [Genome view] |
| GeneID | 114905. |
| KEGG | hsa:114905. |
| UCSC | uc003gno.1. human. |
Organism-specific databases | |
| CTD | 114905. |
| GeneCards | GC04P015017. |
| HGNC | HGNC:14342. C1QTNF7. |
| HPA | CAB007055. |
| PharmGKB | PA25634. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG04396. |
| HOGENOM | HBG444750. |
| HOVERGEN | Q9BXJ2. |
| InParanoid | Q9BXJ2. |
| PhylomeDB | Q9BXJ2. |
Gene expression databases | |
| ArrayExpress | Q9BXJ2. |
| Bgee | Q9BXJ2. |
| CleanEx | HS_C1QTNF7. |
| Genevestigator | Q9BXJ2. |
| GermOnline | ENSG00000163145. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR001073. C1q. IPR008160. Collagen. IPR008983. Tumour_necrosis_fac-like. [Graphical view] |
| Gene3D | G3DSA:2.60.120.40. Tumour_necrosis_fac-like. 1 hit. |
| Pfam | PF00386. C1q. 1 hit. PF01391. Collagen. 2 hits. [Graphical view] |
| PRINTS | PR00007. COMPLEMNTC1Q. |
| SMART | SM00110. C1Q. 1 hit. [Graphical view] |
| PROSITE | PS50871. C1Q. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 79426. |
Entry information
| Entry name | C1QT7_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9BXJ2 Secondary accession number(s): B2RBT3 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 4 Human chromosome 4: entries, gene names and cross-references to MIM |
| SIMILARITY comments Index of protein domains and families |

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