Q9BVK2 (ALG8_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 112.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase EC=2.4.1.265 Alternative name(s): Asparagine-linked glycosylation protein 8 homolog Dol-P-Glc:Glc(1)Man(9)GlcNAc(2)-PP-dolichyl alpha-1,3-glucosyltransferase Dolichyl-P-Glc:Glc1Man9GlcNAc2-PP-dolichyl glucosyltransferase | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 526 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Adds the second glucose residue to the lipid-linked oligosaccharide precursor for N-linked glycosylation. Transfers glucose from dolichyl phosphate glucose (Dol-P-Glc) onto the lipid-linked oligosaccharide Glc1Man9GlcNAc(2)-PP-Dol By similarity. |
| Catalytic activity | Dolichyl beta-D-glucosyl phosphate + D-Glc-alpha-(1->3)-D-Man-alpha-(1->2)-D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-(D-Man-alpha-(1->2)-D-Man-alpha-(1->6))-D-Man-alpha-(1->6)]-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol = D-Glc-alpha-(1->3)-D-Glc-alpha-(1->3)-D-Man-alpha-(1->2)-D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-(D-Man-alpha-(1->2)-D-Man-alpha-(1->6))-D-Man-alpha-(1->6)]-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol + dolichyl phosphate. |
| Pathway | |
| Subcellular location | Endoplasmic reticulum membrane; Multi-pass membrane protein By similarity. |
| Involvement in disease | Congenital disorder of glycosylation 1H (CDG1H) [MIM:608104]: A multisystem disorder caused by a defect in glycoprotein biosynthesis and characterized by under-glycosylated serum glycoproteins. Congenital disorders of glycosylation result in a wide variety of clinical features, such as defects in the nervous system development, psychomotor retardation, dysmorphic features, hypotonia, coagulation disorders, and immunodeficiency. The broad spectrum of features reflects the critical role of N-glycoproteins during embryonic development, differentiation, and maintenance of cell functions. |
| Sequence similarities | Belongs to the ALG6/ALG8 glucosyltransferase family. |
| Sequence caution | The sequence CAA12176.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Endoplasmic reticulum Membrane |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Disease | Congenital disorder of glycosylation Disease mutation |
| Domain | Transmembrane Transmembrane helix |
| Molecular function | Glycosyltransferase Transferase |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | dolichol-linked oligosaccharide biosynthetic process Traceable author statement. Source: Reactome post-translational protein modificationTraceable author statement. Source: Reactome protein N-linked glycosylation via asparagineTraceable author statement. Source: Reactome |
| Cellular_component | endoplasmic reticulum membrane Traceable author statement. Source: Reactome integral to membraneInferred from electronic annotation. Source: UniProtKB-KW |
| Molecular_function | alpha-1,3-mannosyltransferase activity Inferred from mutant phenotype Ref.5. Source: UniProtKB |
| Complete GO annotation... | |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9BVK2-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9BVK2-2) The sequence of this isoform differs from the canonical sequence as follows: 451-526: KEKPLFNWME...DSAIGKTKKQ → RSFTLVAQAGVQWHDLS | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 526 | 526 | Probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase | PRO_0000174162 | |||||
Regions | |||||||||
| Transmembrane | 4 – 24 | 21 | Helical; Potential | ||||||
| Transmembrane | 103 – 122 | 20 | Helical; Potential | ||||||
| Transmembrane | 143 – 163 | 21 | Helical; Potential | ||||||
| Transmembrane | 188 – 208 | 21 | Helical; Potential | ||||||
| Transmembrane | 238 – 258 | 21 | Helical; Potential | ||||||
| Transmembrane | 334 – 354 | 21 | Helical; Potential | ||||||
| Transmembrane | 368 – 388 | 21 | Helical; Potential | ||||||
| Transmembrane | 389 – 409 | 21 | Helical; Potential | ||||||
| Transmembrane | 427 – 449 | 23 | Helical; Potential | ||||||
| Transmembrane | 461 – 481 | 21 | Helical; Potential | ||||||
| Transmembrane | 488 – 508 | 21 | Helical; Potential | ||||||
Natural variations | |||||||||
| Alternative sequence | 451 – 526 | 76 | KEKPL…KTKKQ → RSFTLVAQAGVQWHDLS in isoform 2. | VSP_046291 | |||||
| Natural variant | 47 | 1 | T → P in CDG1H. Ref.6 | VAR_023480 | |||||
| Natural variant | 222 | 1 | N → S. Ref.1 Ref.6 Corresponds to variant rs665278 [ dbSNP | Ensembl ]. | VAR_023481 | |||||
| Natural variant | 275 | 1 | G → D in CDG1H. Ref.6 | VAR_023482 | |||||
| Natural variant | 439 | 1 | I → T. Corresponds to variant rs17825668 [ dbSNP | Ensembl ]. | VAR_031596 | |||||
Experimental info | |||||||||
| Sequence conflict | 478 | 1 | F → Y in CAA12176. Ref.1 | ||||||
| Sequence conflict | 503 | 1 | I → V in AAH01133. Ref.3 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Characterization of 16 novel human genes showing high similarity to yeast sequences." Stanchi F., Bertocco E., Toppo S., Dioguardi R., Simionati B., Cannata N., Zimbello R., Lanfranchi G., Valle G. Yeast 18:69-80(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), VARIANT SER-222. Tissue: Melanocyte. |
| [2] | "Human chromosome 11 DNA sequence and analysis including novel gene identification." Taylor T.D., Noguchi H., Totoki Y., Toyoda A., Kuroki Y., Dewar K., Lloyd C., Itoh T., Takeda T., Kim D.-W., She X., Barlow K.F., Bloom T., Bruford E., Chang J.L., Cuomo C.A., Eichler E., FitzGerald M.G. Sakaki Y.Nature 440:497-500(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Skin. |
| [5] | "A deficiency in dolichyl-P-glucose:Glc1Man9GlcNAc2-PP-dolichyl alpha3-glucosyltransferase defines a new subtype of congenital disorders of glycosylation." Chantret I., Dancourt J., Dupre T., Delenda C., Bucher S., Vuillaumier-Barrot S., Ogier de Baulny H., Peletan C., Danos O., Seta N., Durand G., Oriol R., Codogno P., Moore S.E.H. J. Biol. Chem. 278:9962-9971(2003) [PubMed] [Europe PMC] [Abstract] Cited for: INVOLVEMENT IN CONGENITAL DISORDER OF GLYCOSYLATION TYPE I. |
| [6] | "Clinical and molecular features of three patients with congenital disorders of glycosylation type Ih (CDG-Ih) (ALG8 deficiency)." Schollen E., Frank C.G., Keldermans L., Reyntjens R., Grubenmann C.E., Clayton P.T., Winchester B.G., Smeitink J., Wevers R.A., Aebi M., Hennet T., Matthijs G. J. Med. Genet. 41:550-556(2004) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS CDG1H PRO-47 AND ASP-275, VARIANT SER-222. |
Web resources
| GeneReviews |
| GGDB GlycoGene database |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AJ224875 mRNA. Translation: CAA12176.1. Different initiation. AP002520 Genomic DNA. No translation available. CH471076 Genomic DNA. Translation: EAW75050.1. BC001133 mRNA. Translation: AAH01133.1. |
| IPI | IPI00032370. IPI00550318. |
| RefSeq | NP_001007028.1. NM_001007027.2. NP_076984.2. NM_024079.4. |
| UniGene | Hs.503368. |
3D structure databases | |
| ProteinModelPortal | Q9BVK2. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9BVK2. 2 interactions. |
| STRING | 9606.ENSP00000299626. |
Protein family/group databases | |
| CAZy | GT57. Glycosyltransferase Family 57. |
PTM databases | |
| PhosphoSite | Q9BVK2. |
Polymorphism databases | |
| DMDM | 143811361. |
Proteomic databases | |
| PaxDb | Q9BVK2. |
| PRIDE | Q9BVK2. |
Protocols and materials databases | |
| DNASU | 79053. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000299626; ENSP00000299626; ENSG00000159063. ENST00000376156; ENSP00000365326; ENSG00000159063. |
| GeneID | 79053. |
| KEGG | hsa:79053. |
| UCSC | uc001oza.1. human. |
Organism-specific databases | |
| CTD | 79053. |
| GeneCards | GC11M077811. |
| HGNC | HGNC:23161. ALG8. |
| HPA | HPA051898. |
| MIM | 608103. gene. 608104. phenotype. |
| neXtProt | NX_Q9BVK2. |
| Orphanet | 79325. CDG syndrome type Ih. |
| PharmGKB | PA134942124. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG277067. |
| HOGENOM | HOG000168174. |
| HOVERGEN | HBG024332. |
| InParanoid | Q9BVK2. |
| KO | K03849. |
| OMA | FKHIFLY. |
| OrthoDB | EOG4XKV6N. |
| PhylomeDB | Q9BVK2. |
Enzyme and pathway databases | |
| Reactome | REACT_17015. Metabolism of proteins. |
| UniPathway | UPA00378. |
Gene expression databases | |
| ArrayExpress | Q9BVK2. |
| Bgee | Q9BVK2. |
| CleanEx | HS_ALG8. |
| Genevestigator | Q9BVK2. |
| GermOnline | ENSG00000159063. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR004856. Glyco_trans_ALG6/ALG8. [Graphical view] |
| PANTHER | PTHR12413. PTHR12413. 1 hit. |
| Pfam | PF03155. Alg6_Alg8. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 79053. |
| NextBio | 67803. |
| SOURCE | Search... |
Entry information
| Entry name | ALG8_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9BVK2 Secondary accession number(s): A6NDW6, O60860 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 11 Human chromosome 11: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with
