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Q9BVJ7

- DUS23_HUMAN

UniProt

Q9BVJ7 - DUS23_HUMAN

Protein

Dual specificity protein phosphatase 23

Gene

DUSP23

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 5 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Protein phosphatase that mediates dephosphorylation of proteins phosphorylated on Tyr and Ser/Thr residues. In vitro, it can dephosphorylate p44-ERK1 (MAPK3) but not p54 SAPK-beta (MAPK10) in vitro. Able to enhance activation of JNK and p38 (MAPK14).2 Publications

    Catalytic activityi

    Protein tyrosine phosphate + H2O = protein tyrosine + phosphate.PROSITE-ProRule annotation
    [a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

    Kineticsi

    1. KM=1.498 mM for p-nitrophenylphosphate1 Publication

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei95 – 951Phosphocysteine intermediatePROSITE-ProRule annotation

    GO - Molecular functioni

    1. protein tyrosine/serine/threonine phosphatase activity Source: InterPro
    2. protein tyrosine phosphatase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    Hydrolase, Protein phosphatase

    Enzyme and pathway databases

    SABIO-RKQ9BVJ7.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Dual specificity protein phosphatase 23 (EC:3.1.3.16, EC:3.1.3.48)
    Alternative name(s):
    Low molecular mass dual specificity phosphatase 3
    Short name:
    LDP-3
    VH1-like phosphatase Z
    Gene namesi
    Name:DUSP23
    Synonyms:LDP3, VHZ
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 1

    Organism-specific databases

    HGNCiHGNC:21480. DUSP23.

    Subcellular locationi

    Cytoplasmcytosol. Nucleus
    Note: Mainly cytosolic. Also nuclear.

    GO - Cellular componenti

    1. cytosol Source: UniProtKB-SubCell
    2. extracellular vesicular exosome Source: UniProt
    3. nucleus Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm, Nucleus

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA134983082.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 150150Dual specificity protein phosphatase 23PRO_0000094835Add
    BLAST

    Proteomic databases

    MaxQBiQ9BVJ7.
    PaxDbiQ9BVJ7.
    PeptideAtlasiQ9BVJ7.
    PRIDEiQ9BVJ7.

    Expressioni

    Tissue specificityi

    Widely expressed. Highly expressed in spleen, prostate, colon, adrenal gland, mammary gland, thyroid and trachea. Expressed at lower level in uterus, small intestine, bladder, bone marrow, brain, spinal cord and stomach.2 Publications

    Gene expression databases

    BgeeiQ9BVJ7.
    CleanExiHS_DUSP23.
    GenevestigatoriQ9BVJ7.

    Organism-specific databases

    HPAiHPA045792.

    Interactioni

    Protein-protein interaction databases

    BioGridi120275. 22 interactions.
    IntActiQ9BVJ7. 21 interactions.
    MINTiMINT-1412836.
    STRINGi9606.ENSP00000357087.

    Structurei

    Secondary structure

    1
    150
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi9 – 124
    Turni13 – 153
    Beta strandi16 – 205
    Helixi25 – 339
    Beta strandi36 – 416
    Beta strandi43 – 453
    Helixi50 – 523
    Beta strandi56 – 605
    Helixi71 – 8616
    Beta strandi90 – 945
    Beta strandi96 – 994
    Helixi100 – 11415
    Helixi118 – 12811
    Helixi136 – 14914

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2IMGX-ray1.93A2-150[»]
    4ERCX-ray1.15A/B1-150[»]
    ProteinModelPortaliQ9BVJ7.
    SMRiQ9BVJ7. Positions 1-150.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ9BVJ7.

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini75 – 14066Tyrosine-protein phosphataseAdd
    BLAST

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG2453.
    HOGENOMiHOG000108423.
    HOVERGENiHBG056524.
    InParanoidiQ9BVJ7.
    KOiK14165.
    OMAiAVVQFYQ.
    OrthoDBiEOG7PK90Q.
    PhylomeDBiQ9BVJ7.
    TreeFamiTF105125.

    Family and domain databases

    Gene3Di3.90.190.10. 1 hit.
    InterProiIPR000340. Dual-sp_phosphatase_cat-dom.
    IPR029021. Prot-tyrosine_phosphatase-like.
    IPR000387. Tyr/Dual-sp_Pase.
    IPR016130. Tyr_Pase_AS.
    [Graphical view]
    PfamiPF00782. DSPc. 1 hit.
    [Graphical view]
    SUPFAMiSSF52799. SSF52799. 1 hit.
    PROSITEiPS00383. TYR_PHOSPHATASE_1. 1 hit.
    PS50056. TYR_PHOSPHATASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q9BVJ7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGVQPPNFSW VLPGRLAGLA LPRLPAHYQF LLDLGVRHLV SLTERGPPHS    50
    DSCPGLTLHR LRIPDFCPPA PDQIDRFVQI VDEANARGEA VGVHCALGFG 100
    RTGTMLACYL VKERGLAAGD AIAEIRRLRP GSIETYEQEK AVFQFYQRTK 150
    Length:150
    Mass (Da):16,588
    Last modified:June 1, 2001 - v1
    Checksum:i4B72EFA0434B1B5F
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti132 – 1321S → P in BAA91172. (PubMed:14702039)Curated

    Natural variant

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Natural varianti124 – 1241E → V.
    Corresponds to variant rs11544443 [ dbSNP | Ensembl ].
    VAR_051756
    Natural varianti131 – 1311G → S.
    Corresponds to variant rs1129923 [ dbSNP | Ensembl ].
    VAR_023199

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB164404 mRNA. Translation: BAD12141.1.
    AK000449 mRNA. Translation: BAA91172.1.
    AL590560 Genomic DNA. Translation: CAH71101.1.
    BC001140 mRNA. Translation: AAH01140.1.
    CCDSiCCDS1187.1.
    RefSeqiNP_060293.2. NM_017823.3.
    XP_005245346.1. XM_005245289.1.
    UniGeneiHs.425801.

    Genome annotation databases

    EnsembliENST00000368107; ENSP00000357087; ENSG00000158716.
    ENST00000368108; ENSP00000357088; ENSG00000158716.
    ENST00000368109; ENSP00000357089; ENSG00000158716.
    GeneIDi54935.
    KEGGihsa:54935.
    UCSCiuc001ftz.1. human.

    Polymorphism databases

    DMDMi73620828.

    Keywords - Coding sequence diversityi

    Polymorphism

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB164404 mRNA. Translation: BAD12141.1 .
    AK000449 mRNA. Translation: BAA91172.1 .
    AL590560 Genomic DNA. Translation: CAH71101.1 .
    BC001140 mRNA. Translation: AAH01140.1 .
    CCDSi CCDS1187.1.
    RefSeqi NP_060293.2. NM_017823.3.
    XP_005245346.1. XM_005245289.1.
    UniGenei Hs.425801.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2IMG X-ray 1.93 A 2-150 [» ]
    4ERC X-ray 1.15 A/B 1-150 [» ]
    ProteinModelPortali Q9BVJ7.
    SMRi Q9BVJ7. Positions 1-150.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 120275. 22 interactions.
    IntActi Q9BVJ7. 21 interactions.
    MINTi MINT-1412836.
    STRINGi 9606.ENSP00000357087.

    Chemistry

    ChEMBLi CHEMBL2396506.

    Polymorphism databases

    DMDMi 73620828.

    Proteomic databases

    MaxQBi Q9BVJ7.
    PaxDbi Q9BVJ7.
    PeptideAtlasi Q9BVJ7.
    PRIDEi Q9BVJ7.

    Protocols and materials databases

    DNASUi 54935.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000368107 ; ENSP00000357087 ; ENSG00000158716 .
    ENST00000368108 ; ENSP00000357088 ; ENSG00000158716 .
    ENST00000368109 ; ENSP00000357089 ; ENSG00000158716 .
    GeneIDi 54935.
    KEGGi hsa:54935.
    UCSCi uc001ftz.1. human.

    Organism-specific databases

    CTDi 54935.
    GeneCardsi GC01P159750.
    HGNCi HGNC:21480. DUSP23.
    HPAi HPA045792.
    neXtProti NX_Q9BVJ7.
    PharmGKBi PA134983082.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi COG2453.
    HOGENOMi HOG000108423.
    HOVERGENi HBG056524.
    InParanoidi Q9BVJ7.
    KOi K14165.
    OMAi AVVQFYQ.
    OrthoDBi EOG7PK90Q.
    PhylomeDBi Q9BVJ7.
    TreeFami TF105125.

    Enzyme and pathway databases

    SABIO-RK Q9BVJ7.

    Miscellaneous databases

    EvolutionaryTracei Q9BVJ7.
    GeneWikii DUSP23.
    GenomeRNAii 54935.
    NextBioi 58050.
    PROi Q9BVJ7.

    Gene expression databases

    Bgeei Q9BVJ7.
    CleanExi HS_DUSP23.
    Genevestigatori Q9BVJ7.

    Family and domain databases

    Gene3Di 3.90.190.10. 1 hit.
    InterProi IPR000340. Dual-sp_phosphatase_cat-dom.
    IPR029021. Prot-tyrosine_phosphatase-like.
    IPR000387. Tyr/Dual-sp_Pase.
    IPR016130. Tyr_Pase_AS.
    [Graphical view ]
    Pfami PF00782. DSPc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52799. SSF52799. 1 hit.
    PROSITEi PS00383. TYR_PHOSPHATASE_1. 1 hit.
    PS50056. TYR_PHOSPHATASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Characterization of a novel low-molecular-mass dual-specificity phosphatase-3 (LDP-3) that enhances activation of JNK and p38."
      Takagaki K., Satoh T., Tanuma N., Masuda K., Takekawa M., Shima H., Kikuchi K.
      Biochem. J. 383:447-455(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    2. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
      Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
      , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
      Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Carcinoma.
    3. "The DNA sequence and biological annotation of human chromosome 1."
      Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K.
      , Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I.S., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J., Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., Harrison E.S.I., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W., McLaren S., Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N., Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., Durbin R.M., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R.
      Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    4. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Lung.
    5. "The minimal essential core of a cysteine-based protein-tyrosine phosphatase revealed by a novel 16-kDa VH1-like phosphatase, VHZ."
      Alonso A., Burkhalter S., Sasin J., Tautz L., Bogetz J., Huynh H., Bremer M.C.D., Holsinger L.J., Godzik A., Mustelin T.
      J. Biol. Chem. 279:35768-35774(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: ENZYME ACTIVITY, FUNCTION, BIOPHYSICOCHEMICAL PROPERTIES, SUBCELLULAR LOCATION, TISSUE SPECIFICITY.
    6. "Molecular cloning and characterization of a novel dual-specificity phosphatase 23 gene from human fetal brain."
      Wu Q., Li Y., Gu S., Li N., Zheng D., Li D., Zheng Z., Ji C., Xie Y., Mao Y.
      Int. J. Biochem. Cell Biol. 36:1542-1553(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: ENZYME ACTIVITY, FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY.
    7. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    8. "Structure of human dual specificity protein phosphatase 23, VHZ, enzyme-substrate/product complex."
      Agarwal R., Burley S.K., Swaminathan S.
      J. Biol. Chem. 283:8946-8953(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.93 ANGSTROMS) OF 2-150.

    Entry informationi

    Entry nameiDUS23_HUMAN
    AccessioniPrimary (citable) accession number: Q9BVJ7
    Secondary accession number(s): Q9NX48
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: August 16, 2005
    Last sequence update: June 1, 2001
    Last modified: October 1, 2014
    This is version 121 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    Was originally erroneously termed DUSP25.Curated

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. Human chromosome 1
      Human chromosome 1: entries, gene names and cross-references to MIM
    2. Human entries with polymorphisms or disease mutations
      List of human entries with polymorphisms or disease mutations
    3. Human polymorphisms and disease mutations
      Index of human polymorphisms and disease mutations
    4. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    5. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3