Q9BVJ6 (UT14A_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 100.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: U3 small nucleolar RNA-associated protein 14 homolog A Alternative name(s): Antigen NY-CO-16 Serologically defined colon cancer antigen 16 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 771 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | May be required for ribosome biogenesis By similarity. |
| Subcellular location | |
| Tissue specificity | Ubiquitously expressed. Ref.6 |
| Miscellaneous | The human genome also contains the UTP14C gene, an autosomal retrotransposed copy of this X-linked gene. Evolution of autosomal retrogenes from X-linked progenitors compensates for X-chromosome silencing during male meiosis. |
| Sequence similarities | Belongs to the UTP14 family. |
| Sequence caution | The sequence CAI42909.1 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Ribosome biogenesis |
| Cellular component | Nucleus |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Coiled coil |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | rRNA processing Inferred from electronic annotation. Source: InterPro |
| Cellular_component | nucleolus Inferred from electronic annotation. Source: UniProtKB-SubCell small-subunit processomeInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| GADD45G | O95257 | 2 | EBI-473284,EBI-448202 |
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9BVJ6-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9BVJ6-2) The sequence of this isoform differs from the canonical sequence as follows: 1-12: MTANRLAESLLA → MKGDFRKKKSEA 13-180: Missing. | ||||||
| Note: Gene prediction based on EST data. No experimental confirmation available. | ||||||
| Isoform 3 (identifier: Q9BVJ6-3) The sequence of this isoform differs from the canonical sequence as follows: 128-179: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 771 | 771 | U3 small nucleolar RNA-associated protein 14 homolog A | PRO_0000065733 | |||||
Regions | |||||||||
| Coiled coil | 40 – 67 | 28 | Potential | ||||||
| Coiled coil | 216 – 290 | 75 | Potential | ||||||
| Coiled coil | 317 – 347 | 31 | Potential | ||||||
Amino acid modifications | |||||||||
| Modified residue | 29 | 1 | Phosphoserine Ref.10 Ref.11 | ||||||
| Modified residue | 31 | 1 | Phosphoserine Ref.10 Ref.11 | ||||||
| Modified residue | 52 | 1 | Phosphoserine Ref.10 Ref.12 | ||||||
| Modified residue | 77 | 1 | Phosphoserine Ref.10 | ||||||
| Modified residue | 205 | 1 | Phosphothreonine Ref.12 | ||||||
| Modified residue | 405 | 1 | Phosphoserine Ref.10 Ref.13 | ||||||
| Modified residue | 407 | 1 | Phosphoserine Ref.10 Ref.13 | ||||||
| Modified residue | 437 | 1 | Phosphoserine Ref.9 Ref.11 Ref.13 | ||||||
| Modified residue | 445 | 1 | Phosphoserine Ref.7 Ref.10 Ref.12 Ref.13 | ||||||
| Modified residue | 453 | 1 | Phosphoserine Ref.12 Ref.13 | ||||||
| Modified residue | 569 | 1 | Phosphoserine Ref.12 | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 12 | 12 | MTANR…ESLLA → MKGDFRKKKSEA in isoform 2. | VSP_014475 | |||||
| Alternative sequence | 13 – 180 | 168 | Missing in isoform 2. | VSP_014476 | |||||
| Alternative sequence | 128 – 179 | 52 | Missing in isoform 3. | VSP_046389 | |||||
| Natural variant | 487 | 1 | V → A. Corresponds to variant rs2281278 [ dbSNP | Ensembl ]. | VAR_022811 | |||||
| Natural variant | 771 | 1 | D → G. Ref.1 Corresponds to variant rs1055032 [ dbSNP | Ensembl ]. | VAR_069181 | |||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 3), VARIANT GLY-771. |
| [2] | "The DNA sequence of the human X chromosome." Ross M.T., Grafham D.V., Coffey A.J., Scherer S., McLay K., Muzny D., Platzer M., Howell G.R., Burrows C., Bird C.P., Frankish A., Lovell F.L., Howe K.L., Ashurst J.L., Fulton R.S., Sudbrak R., Wen G., Jones M.C. Bentley D.R.Nature 434:325-337(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] (ISOFORM 2). |
| [3] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Cervix, Eye and Muscle. |
| [5] | "Functional proteomic analysis of human nucleolus." Scherl A., Coute Y., Deon C., Calle A., Kindbeiter K., Sanchez J.-C., Greco A., Hochstrasser D.F., Diaz J.-J. Mol. Biol. Cell 13:4100-4109(2002) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY, SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [6] | "The mouse juvenile spermatogonial depletion (jsd) phenotype is due to a mutation in the X-derived retrogene, mUtp14b." Rohozinski J., Bishop C.E. Proc. Natl. Acad. Sci. U.S.A. 101:11695-11700(2004) [PubMed] [Europe PMC] [Abstract] Cited for: TISSUE SPECIFICITY. |
| [7] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-445, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [8] | "A probability-based approach for high-throughput protein phosphorylation analysis and site localization." Beausoleil S.A., Villen J., Gerber S.A., Rush J., Gygi S.P. Nat. Biotechnol. 24:1285-1292(2006) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [9] | "ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage." Matsuoka S., Ballif B.A., Smogorzewska A., McDonald E.R. III, Hurov K.E., Luo J., Bakalarski C.E., Zhao Z., Solimini N., Lerenthal Y., Shiloh Y., Gygi S.P., Elledge S.J. Science 316:1160-1166(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-437, MASS SPECTROMETRY. Tissue: Embryonic kidney. |
| [10] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-29; SER-31; SER-52; SER-77; SER-405; SER-407 AND SER-445, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [11] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-29; SER-31 AND SER-437, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [12] | "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis." Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M. Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-52; THR-205; SER-445; SER-453 AND SER-569, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [13] | "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation." Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B. Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-405; SER-407; SER-437; SER-445 AND SER-453, MASS SPECTROMETRY. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AK291918 mRNA. Translation: BAF84607.1. AK298578 mRNA. Translation: BAG60770.1. AL034405 Genomic DNA. Translation: CAI42908.1. AL034405 Genomic DNA. Translation: CAI42909.1. Sequence problems. CH471107 Genomic DNA. Translation: EAX11820.1. BC001149 mRNA. Translation: AAH01149.1. BC009649 mRNA. Translation: AAH09649.1. BC014987 mRNA. Translation: AAH14987.1. |
| IPI | IPI00107113. IPI00607550. IPI00940505. |
| RefSeq | NP_001159693.1. NM_001166221.1. NP_006640.2. NM_006649.3. |
| UniGene | Hs.458598. |
3D structure databases | |
| ProteinModelPortal | Q9BVJ6. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP-32505N. |
| IntAct | Q9BVJ6. 40 interactions. |
| MINT | MINT-1396425. |
| STRING | 9606.ENSP00000377944. |
PTM databases | |
| PhosphoSite | Q9BVJ6. |
Polymorphism databases | |
| DMDM | 68566226. |
2D gel databases | |
| SWISS-2DPAGE | Q9BVJ6. |
Proteomic databases | |
| PeptideAtlas | Q9BVJ6. |
| PRIDE | Q9BVJ6. |
Protocols and materials databases | |
| DNASU | 10813. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000371042; ENSP00000360081; ENSG00000156697. ENST00000394422; ENSP00000377944; ENSG00000156697. ENST00000425117; ENSP00000388669; ENSG00000156697. ENST00000427972; ENSP00000413187; ENSG00000156697. |
| GeneID | 10813. |
| KEGG | hsa:10813. |
| UCSC | uc004euz.3. human. |
Organism-specific databases | |
| CTD | 10813. |
| GeneCards | GC0XP129040. |
| HGNC | HGNC:10665. UTP14A. |
| MIM | 300508. gene. |
| neXtProt | NX_Q9BVJ6. |
| PharmGKB | PA35595. |
| GenAtlas | Search... |
Phylogenomic databases | |
| HOGENOM | HOG000231396. |
| HOVERGEN | HBG056550. |
| KO | K14567. |
| OMA | ECFQNKE. |
| OrthoDB | EOG4XKV6P. |
| PhylomeDB | Q9BVJ6. |
Gene expression databases | |
| ArrayExpress | Q9BVJ6. |
| Bgee | Q9BVJ6. |
| CleanEx | HS_UTP14A. |
| Genevestigator | Q9BVJ6. |
| GermOnline | ENSG00000156697. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR006709. SSU_processome_Utp14. [Graphical view] |
| PANTHER | PTHR14150. PTHR14150. 1 hit. |
| Pfam | PF04615. Utp14. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChiTaRS | UTP14A. human. |
| GenomeRNAi | 10813. |
| NextBio | 41075. |
| SOURCE | Search... |
Entry information
| Entry name | UT14A_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9BVJ6 Secondary accession number(s): A8K7A3 Q5JYF1 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome X Human chromosome X: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
