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Q9BVG4

- PBDC1_HUMAN

UniProt

Q9BVG4 - PBDC1_HUMAN

Protein

Protein PBDC1

Gene

PBDC1

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 94 (01 Oct 2014)
      Sequence version 1 (01 Jun 2001)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein PBDC1
    Alternative name(s):
    Polysaccharide biosynthesis domain-containing protein 1
    Gene namesi
    Name:PBDC1
    Synonyms:CXorf26
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome X

    Organism-specific databases

    HGNCiHGNC:28790. PBDC1.

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA128394657.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 233233Protein PBDC1PRO_0000254105Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei126 – 1261Phosphoserine1 Publication
    Modified residuei181 – 1811Phosphoserine1 Publication
    Modified residuei197 – 1971Phosphoserine2 Publications

    Keywords - PTMi

    Phosphoprotein

    Proteomic databases

    MaxQBiQ9BVG4.
    PaxDbiQ9BVG4.
    PeptideAtlasiQ9BVG4.
    PRIDEiQ9BVG4.

    PTM databases

    PhosphoSiteiQ9BVG4.

    Expressioni

    Gene expression databases

    ArrayExpressiQ9BVG4.
    BgeeiQ9BVG4.
    CleanExiHS_CXorf26.
    GenevestigatoriQ9BVG4.

    Organism-specific databases

    HPAiHPA003155.

    Interactioni

    Protein-protein interaction databases

    BioGridi119416. 11 interactions.
    IntActiQ9BVG4. 6 interactions.
    STRINGi9606.ENSP00000362456.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9BVG4.
    SMRiQ9BVG4. Positions 26-155.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PBDC1 family.Curated

    Phylogenomic databases

    eggNOGiNOG285457.
    HOGENOMiHOG000189636.
    HOVERGENiHBG059712.
    InParanoidiQ9BVG4.
    OMAiLRLNCSQ.
    PhylomeDBiQ9BVG4.
    TreeFamiTF314442.

    Family and domain databases

    Gene3Di1.10.3560.10. 1 hit.
    InterProiIPR021148. Put_polysacc_synth.
    IPR008476. UPF0368_met/fun.
    IPR023139. Yst0336-like_domain.
    [Graphical view]
    PANTHERiPTHR13410. PTHR13410. 1 hit.
    PfamiPF04669. Polysacc_synt_4. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q9BVG4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAATSGTDEP VSGELVSVAH ALSLPAESYG NDPDIEMAWA MRAMQHAEVY    50
    YKLISSVDPQ FLKLTKVDDQ IYSEFRKNFE TLRIDVLDPE ELKSESAKEK 100
    WRPFCLKFNG IVEDFNYGTL LRLDCSQGYT EENTIFAPRI QFFAIEIARN 150
    REGYNKAVYI SVQDKEGEKG VNNGGEKRAD SGEEENTKNG GEKGADSGEE 200
    KEEGINREDK TDKGGEKGKE ADKEINKSGE KAM 233
    Length:233
    Mass (Da):26,057
    Last modified:June 1, 2001 - v1
    Checksum:i31FD39EC70B9A9C7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC001220 mRNA. Translation: AAH01220.1.
    BC051894 mRNA. Translation: AAH51894.1.
    CCDSiCCDS14432.1.
    RefSeqiNP_057584.2. NM_016500.3.
    UniGeneiHs.370100.

    Genome annotation databases

    EnsembliENST00000373358; ENSP00000362456; ENSG00000102390.
    GeneIDi51260.
    KEGGihsa:51260.
    UCSCiuc004ecl.1. human.

    Polymorphism databases

    DMDMi74733325.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC001220 mRNA. Translation: AAH01220.1 .
    BC051894 mRNA. Translation: AAH51894.1 .
    CCDSi CCDS14432.1.
    RefSeqi NP_057584.2. NM_016500.3.
    UniGenei Hs.370100.

    3D structure databases

    ProteinModelPortali Q9BVG4.
    SMRi Q9BVG4. Positions 26-155.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 119416. 11 interactions.
    IntActi Q9BVG4. 6 interactions.
    STRINGi 9606.ENSP00000362456.

    PTM databases

    PhosphoSitei Q9BVG4.

    Polymorphism databases

    DMDMi 74733325.

    Proteomic databases

    MaxQBi Q9BVG4.
    PaxDbi Q9BVG4.
    PeptideAtlasi Q9BVG4.
    PRIDEi Q9BVG4.

    Protocols and materials databases

    DNASUi 51260.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000373358 ; ENSP00000362456 ; ENSG00000102390 .
    GeneIDi 51260.
    KEGGi hsa:51260.
    UCSCi uc004ecl.1. human.

    Organism-specific databases

    CTDi 51260.
    GeneCardsi GC0XP075403.
    H-InvDB HIX0016884.
    HIX0148004.
    HGNCi HGNC:28790. PBDC1.
    HPAi HPA003155.
    neXtProti NX_Q9BVG4.
    PharmGKBi PA128394657.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi NOG285457.
    HOGENOMi HOG000189636.
    HOVERGENi HBG059712.
    InParanoidi Q9BVG4.
    OMAi LRLNCSQ.
    PhylomeDBi Q9BVG4.
    TreeFami TF314442.

    Miscellaneous databases

    ChiTaRSi CXorf26. human.
    GenomeRNAii 51260.
    NextBioi 54431.

    Gene expression databases

    ArrayExpressi Q9BVG4.
    Bgeei Q9BVG4.
    CleanExi HS_CXorf26.
    Genevestigatori Q9BVG4.

    Family and domain databases

    Gene3Di 1.10.3560.10. 1 hit.
    InterProi IPR021148. Put_polysacc_synth.
    IPR008476. UPF0368_met/fun.
    IPR023139. Yst0336-like_domain.
    [Graphical view ]
    PANTHERi PTHR13410. PTHR13410. 1 hit.
    Pfami PF04669. Polysacc_synt_4. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Leiomyosarcoma and Rhabdomyosarcoma.
    2. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-126, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
      Tissue: Embryonic kidney.
    3. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
      Tissue: Cervix carcinoma.
    4. "Large-scale phosphoproteome analysis of human liver tissue by enrichment and fractionation of phosphopeptides with strong anion exchange chromatography."
      Han G., Ye M., Zhou H., Jiang X., Feng S., Jiang X., Tian R., Wan D., Zou H., Gu J.
      Proteomics 8:1346-1361(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-197, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
      Tissue: Liver.
    5. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    6. "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation."
      Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B.
      Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-181 AND SER-197, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

    Entry informationi

    Entry nameiPBDC1_HUMAN
    AccessioniPrimary (citable) accession number: Q9BVG4
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 31, 2006
    Last sequence update: June 1, 2001
    Last modified: October 1, 2014
    This is version 94 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome X
      Human chromosome X: entries, gene names and cross-references to MIM
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3