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Protein

Protein PBDC1

Gene

PBDC1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Protein PBDC1
Alternative name(s):
Polysaccharide biosynthesis domain-containing protein 1
Gene namesi
Name:PBDC1
Synonyms:CXorf26
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome X

Organism-specific databases

EuPathDBiHostDB:ENSG00000102390.10.
HGNCiHGNC:28790. PBDC1.

Subcellular locationi

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000102390.
PharmGKBiPA128394657.

Polymorphism and mutation databases

BioMutaiPBDC1.
DMDMi74733325.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002541051 – 233Protein PBDC1Add BLAST233

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei126PhosphoserineCombined sources1
Modified residuei181PhosphoserineCombined sources1
Modified residuei197PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

EPDiQ9BVG4.
MaxQBiQ9BVG4.
PaxDbiQ9BVG4.
PeptideAtlasiQ9BVG4.
PRIDEiQ9BVG4.

PTM databases

iPTMnetiQ9BVG4.
PhosphoSitePlusiQ9BVG4.

Expressioni

Gene expression databases

BgeeiENSG00000102390.
CleanExiHS_CXorf26.
ExpressionAtlasiQ9BVG4. baseline and differential.
GenevisibleiQ9BVG4. HS.

Organism-specific databases

HPAiHPA003155.

Interactioni

Protein-protein interaction databases

BioGridi119416. 14 interactors.
IntActiQ9BVG4. 7 interactors.
STRINGi9606.ENSP00000362456.

Structurei

3D structure databases

ProteinModelPortaliQ9BVG4.
SMRiQ9BVG4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PBDC1 family.Curated

Phylogenomic databases

eggNOGiKOG4093. Eukaryota.
ENOG4111SHF. LUCA.
GeneTreeiENSGT00390000016333.
HOGENOMiHOG000189636.
HOVERGENiHBG059712.
InParanoidiQ9BVG4.
OMAiFVPRMQF.
OrthoDBiEOG091G0S8Y.
PhylomeDBiQ9BVG4.
TreeFamiTF314442.

Family and domain databases

Gene3Di1.10.3560.10. 1 hit.
InterProiView protein in InterPro
IPR008476. PBDC1_metazoa/fungi.
IPR021148. Polysacc_synth_dom.
IPR023139. Yst0336-like_domain.
PANTHERiPTHR13410. PTHR13410. 1 hit.
PfamiView protein in Pfam
PF04669. Polysacc_synt_4. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9BVG4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAATSGTDEP VSGELVSVAH ALSLPAESYG NDPDIEMAWA MRAMQHAEVY
60 70 80 90 100
YKLISSVDPQ FLKLTKVDDQ IYSEFRKNFE TLRIDVLDPE ELKSESAKEK
110 120 130 140 150
WRPFCLKFNG IVEDFNYGTL LRLDCSQGYT EENTIFAPRI QFFAIEIARN
160 170 180 190 200
REGYNKAVYI SVQDKEGEKG VNNGGEKRAD SGEEENTKNG GEKGADSGEE
210 220 230
KEEGINREDK TDKGGEKGKE ADKEINKSGE KAM
Length:233
Mass (Da):26,057
Last modified:June 1, 2001 - v1
Checksum:i31FD39EC70B9A9C7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC001220 mRNA. Translation: AAH01220.1.
BC051894 mRNA. Translation: AAH51894.1.
CCDSiCCDS14432.1.
RefSeqiNP_001287817.1. NM_001300888.1.
NP_057584.2. NM_016500.3.
UniGeneiHs.370100.

Genome annotation databases

EnsembliENST00000373358; ENSP00000362456; ENSG00000102390.
GeneIDi51260.
KEGGihsa:51260.
UCSCiuc004ecl.2. human.

Similar proteinsi

Entry informationi

Entry nameiPBDC1_HUMAN
AccessioniPrimary (citable) accession number: Q9BVG4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: June 1, 2001
Last modified: September 27, 2017
This is version 117 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome X
    Human chromosome X: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries