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Q9BUY5

- ZN426_HUMAN

UniProt

Q9BUY5 - ZN426_HUMAN

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Protein

Zinc finger protein 426

Gene
ZNF426
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

May be involved in transcriptional regulation.

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri146 – 17429C2H2-type 1; atypicalAdd
BLAST
Zinc fingeri224 – 24623C2H2-type 2Add
BLAST
Zinc fingeri280 – 30223C2H2-type 3Add
BLAST
Zinc fingeri308 – 33023C2H2-type 4Add
BLAST
Zinc fingeri336 – 35823C2H2-type 5Add
BLAST
Zinc fingeri364 – 38623C2H2-type 6Add
BLAST
Zinc fingeri392 – 41423C2H2-type 7Add
BLAST
Zinc fingeri420 – 44223C2H2-type 8Add
BLAST
Zinc fingeri448 – 47023C2H2-type 9Add
BLAST
Zinc fingeri476 – 49823C2H2-type 10Add
BLAST
Zinc fingeri504 – 52623C2H2-type 11Add
BLAST
Zinc fingeri532 – 55423C2H2-type 12Add
BLAST

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: UniProtKB-KW
  2. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding, Metal-binding, Zinc

Enzyme and pathway databases

ReactomeiREACT_12627. Generic Transcription Pathway.

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc finger protein 426
Gene namesi
Name:ZNF426
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 19

Organism-specific databases

HGNCiHGNC:20725. ZNF426.

Subcellular locationi

Nucleus Reviewed prediction

GO - Cellular componenti

  1. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA134991761.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 554554Zinc finger protein 426PRO_0000047576Add
BLAST

Proteomic databases

PaxDbiQ9BUY5.
PRIDEiQ9BUY5.

PTM databases

PhosphoSiteiQ9BUY5.

Expressioni

Gene expression databases

ArrayExpressiQ9BUY5.
BgeeiQ9BUY5.
CleanExiHS_ZNF426.
GenevestigatoriQ9BUY5.

Organism-specific databases

HPAiHPA029342.

Interactioni

Protein-protein interaction databases

BioGridi122536. 11 interactions.
IntActiQ9BUY5. 9 interactions.
MINTiMINT-1459571.
STRINGi9606.ENSP00000253115.

Structurei

3D structure databases

ProteinModelPortaliQ9BUY5.
SMRiQ9BUY5. Positions 42-82, 148-554.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini42 – 11271KRABAdd
BLAST

Sequence similaritiesi

Contains 12 C2H2-type zinc fingers.
Contains 1 KRAB domain.

Zinc finger

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri146 – 17429C2H2-type 1; atypicalAdd
BLAST
Zinc fingeri224 – 24623C2H2-type 2Add
BLAST
Zinc fingeri280 – 30223C2H2-type 3Add
BLAST
Zinc fingeri308 – 33023C2H2-type 4Add
BLAST
Zinc fingeri336 – 35823C2H2-type 5Add
BLAST
Zinc fingeri364 – 38623C2H2-type 6Add
BLAST
Zinc fingeri392 – 41423C2H2-type 7Add
BLAST
Zinc fingeri420 – 44223C2H2-type 8Add
BLAST
Zinc fingeri448 – 47023C2H2-type 9Add
BLAST
Zinc fingeri476 – 49823C2H2-type 10Add
BLAST
Zinc fingeri504 – 52623C2H2-type 11Add
BLAST
Zinc fingeri532 – 55423C2H2-type 12Add
BLAST

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

eggNOGiCOG5048.
HOGENOMiHOG000234617.
HOVERGENiHBG018163.
InParanoidiQ9BUY5.
KOiK09228.
OMAiAFNYSTH.
OrthoDBiEOG7KSX7Q.
PhylomeDBiQ9BUY5.
TreeFamiTF342172.

Family and domain databases

Gene3Di3.30.160.60. 11 hits.
InterProiIPR001909. Krueppel-associated_box.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamiPF01352. KRAB. 1 hit.
PF00096. zf-C2H2. 1 hit.
[Graphical view]
SMARTiSM00349. KRAB. 1 hit.
SM00355. ZnF_C2H2. 12 hits.
[Graphical view]
SUPFAMiSSF109640. SSF109640. 1 hit.
PROSITEiPS50805. KRAB. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 11 hits.
PS50157. ZINC_FINGER_C2H2_2. 12 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9BUY5-1 [UniParc]FASTAAdd to Basket

« Hide

MAAADLSHGH YLSGDPVCLH EEKTPAGRIV ADCLTDCYQD SVTFDDVAVD    50
FTQEEWTLLD STQRSLYSDV MLENYKNLAT VGGQIIKPSL ISWLEQEESR 100
TVQGGVLQGW EMRLETQWSI LQQDFLRGQT SIGIQLEGKH NGRELCDCEQ 150
CGEVFSEHSC LKTHVRTQST GNTHDCNQYG KDFLTLCEKT STGEKLSEFN 200
QSEKIFSLTP NIVYQRTSTQ EKSFECSHCG KSFINESYLQ AHMRTHNGEK 250
LYEWRNYGPG FIDSTSLSVL IETLNAKKPY KCKECGKGYR YPAYLSIHMR 300
THTGEKPYEC KECGKAFNYS NSFQIHGRTH TGEKPYVCKE CGKAFTQYSG 350
LSMHVRSHSG DKPYECKECG KSFLTSSRLI QHIRTHTGEK PFVCVECGKA 400
FAVSSNLSGH LRTHTEEKAC ECKICGKVFG YPSCLNNHMR THSAQKPYTC 450
KECGKAFNYS THLKIHMRIH TGEKPYECKQ CGKAFSHSSS FQIHERTHTG 500
EKPYECKECG KAFTCSSSFR IHEKTHTEEK PYKCQQCGKA YSHPRSLRRH 550
EQIH 554
Length:554
Mass (Da):63,106
Last modified:June 1, 2001 - v1
Checksum:i8490888CC9537F9C
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti4 – 41A → V.
Corresponds to variant rs2042200 [ dbSNP | Ensembl ].
VAR_024214
Natural varianti219 – 2191T → A.
Corresponds to variant rs10420644 [ dbSNP | Ensembl ].
VAR_052824

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK095759 mRNA. Translation: BAG53124.1.
CH471106 Genomic DNA. Translation: EAW84039.1.
BC001791 mRNA. Translation: AAH01791.1.
CCDSiCCDS12215.1.
RefSeqiNP_077011.1. NM_024106.1.
UniGeneiHs.594011.

Genome annotation databases

EnsembliENST00000253115; ENSP00000253115; ENSG00000130818.
ENST00000535489; ENSP00000439017; ENSG00000130818.
GeneIDi79088.
KEGGihsa:79088.
UCSCiuc002mlq.3. human.

Polymorphism databases

DMDMi34925651.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK095759 mRNA. Translation: BAG53124.1 .
CH471106 Genomic DNA. Translation: EAW84039.1 .
BC001791 mRNA. Translation: AAH01791.1 .
CCDSi CCDS12215.1.
RefSeqi NP_077011.1. NM_024106.1.
UniGenei Hs.594011.

3D structure databases

ProteinModelPortali Q9BUY5.
SMRi Q9BUY5. Positions 42-82, 148-554.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 122536. 11 interactions.
IntActi Q9BUY5. 9 interactions.
MINTi MINT-1459571.
STRINGi 9606.ENSP00000253115.

PTM databases

PhosphoSitei Q9BUY5.

Polymorphism databases

DMDMi 34925651.

Proteomic databases

PaxDbi Q9BUY5.
PRIDEi Q9BUY5.

Protocols and materials databases

DNASUi 79088.
Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000253115 ; ENSP00000253115 ; ENSG00000130818 .
ENST00000535489 ; ENSP00000439017 ; ENSG00000130818 .
GeneIDi 79088.
KEGGi hsa:79088.
UCSCi uc002mlq.3. human.

Organism-specific databases

CTDi 79088.
GeneCardsi GC19M009638.
HGNCi HGNC:20725. ZNF426.
HPAi HPA029342.
neXtProti NX_Q9BUY5.
PharmGKBi PA134991761.
GenAtlasi Search...

Phylogenomic databases

eggNOGi COG5048.
HOGENOMi HOG000234617.
HOVERGENi HBG018163.
InParanoidi Q9BUY5.
KOi K09228.
OMAi AFNYSTH.
OrthoDBi EOG7KSX7Q.
PhylomeDBi Q9BUY5.
TreeFami TF342172.

Enzyme and pathway databases

Reactomei REACT_12627. Generic Transcription Pathway.

Miscellaneous databases

GenomeRNAii 79088.
NextBioi 67913.
PROi Q9BUY5.

Gene expression databases

ArrayExpressi Q9BUY5.
Bgeei Q9BUY5.
CleanExi HS_ZNF426.
Genevestigatori Q9BUY5.

Family and domain databases

Gene3Di 3.30.160.60. 11 hits.
InterProi IPR001909. Krueppel-associated_box.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view ]
Pfami PF01352. KRAB. 1 hit.
PF00096. zf-C2H2. 1 hit.
[Graphical view ]
SMARTi SM00349. KRAB. 1 hit.
SM00355. ZnF_C2H2. 12 hits.
[Graphical view ]
SUPFAMi SSF109640. SSF109640. 1 hit.
PROSITEi PS50805. KRAB. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 11 hits.
PS50157. ZINC_FINGER_C2H2_2. 12 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Brain.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Skin.

Entry informationi

Entry nameiZN426_HUMAN
AccessioniPrimary (citable) accession number: Q9BUY5
Secondary accession number(s): B3KTL2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 19, 2003
Last sequence update: June 1, 2001
Last modified: September 3, 2014
This is version 113 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 19
    Human chromosome 19: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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