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Protein

Protein FAM167B

Gene

FAM167B

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Protein FAM167B
Gene namesi
Name:FAM167B
Synonyms:C1orf90
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640 Componenti: Chromosome 1

Organism-specific databases

HGNCiHGNC:28133. FAM167B.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA162387068.

Polymorphism and mutation databases

BioMutaiFAM167B.
DMDMi125987799.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 163163Protein FAM167BPRO_0000221434Add
BLAST

Proteomic databases

PaxDbiQ9BTA0.
PRIDEiQ9BTA0.

PTM databases

PhosphoSiteiQ9BTA0.

Expressioni

Gene expression databases

BgeeiQ9BTA0.
CleanExiHS_FAM167B.
GenevestigatoriQ9BTA0.

Organism-specific databases

HPAiHPA029398.

Structurei

3D structure databases

ProteinModelPortaliQ9BTA0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili73 – 13260Sequence AnalysisAdd
BLAST

Sequence similaritiesi

Belongs to the FAM167 (SEC) family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiNOG271116.
GeneTreeiENSGT00390000010627.
HOGENOMiHOG000004827.
HOVERGENiHBG074242.
InParanoidiQ9BTA0.
OMAiKVDQVCH.
OrthoDBiEOG7JMGG3.
PhylomeDBiQ9BTA0.
TreeFamiTF330468.

Family and domain databases

InterProiIPR024280. FAM167.
[Graphical view]
PfamiPF11652. DUF3259. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9BTA0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLGLLKFQA VGEEDEEDEE GESLDSVKAL TAKLQLQTRR PSYLEWTAQV
60 70 80 90 100
QSQAWRRAQA KPGPGGPGDI CGFDSMDSAL EWLRRELREM QAQDRQLAGQ
110 120 130 140 150
LLRLRAQLHR LKMDQACHLH QELLDEAELE LELEPGAGLA LAPLLRHLGL
160
TRMNISARRF TLC
Length:163
Mass (Da):18,414
Last modified:February 6, 2007 - v2
Checksum:i7C1F3BF627C4DB60
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL121991 Genomic DNA. Translation: CAI22319.2.
BC004269 mRNA. Translation: AAH04269.2.
CCDSiCCDS358.2.
RefSeqiNP_116037.2. NM_032648.2.
UniGeneiHs.18449.

Genome annotation databases

EnsembliENST00000373582; ENSP00000362684; ENSG00000183615.
GeneIDi84734.
KEGGihsa:84734.
UCSCiuc001buw.3. human.

Polymorphism and mutation databases

BioMutaiFAM167B.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL121991 Genomic DNA. Translation: CAI22319.2.
BC004269 mRNA. Translation: AAH04269.2.
CCDSiCCDS358.2.
RefSeqiNP_116037.2. NM_032648.2.
UniGeneiHs.18449.

3D structure databases

ProteinModelPortaliQ9BTA0.
ModBaseiSearch...
MobiDBiSearch...

PTM databases

PhosphoSiteiQ9BTA0.

Polymorphism and mutation databases

BioMutaiFAM167B.
DMDMi125987799.

Proteomic databases

PaxDbiQ9BTA0.
PRIDEiQ9BTA0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000373582; ENSP00000362684; ENSG00000183615.
GeneIDi84734.
KEGGihsa:84734.
UCSCiuc001buw.3. human.

Organism-specific databases

CTDi84734.
GeneCardsiGC01P032712.
HGNCiHGNC:28133. FAM167B.
HPAiHPA029398.
neXtProtiNX_Q9BTA0.
PharmGKBiPA162387068.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG271116.
GeneTreeiENSGT00390000010627.
HOGENOMiHOG000004827.
HOVERGENiHBG074242.
InParanoidiQ9BTA0.
OMAiKVDQVCH.
OrthoDBiEOG7JMGG3.
PhylomeDBiQ9BTA0.
TreeFamiTF330468.

Miscellaneous databases

GenomeRNAii84734.
NextBioi74856.
PROiQ9BTA0.

Gene expression databases

BgeeiQ9BTA0.
CleanExiHS_FAM167B.
GenevestigatoriQ9BTA0.

Family and domain databases

InterProiIPR024280. FAM167.
[Graphical view]
PfamiPF11652. DUF3259. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The DNA sequence and biological annotation of human chromosome 1."
    Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K.
    , Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I.S., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J., Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., Harrison E.S.I., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W., McLaren S., Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N., Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., Durbin R.M., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R.
    Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Melanoma.

Entry informationi

Entry nameiF167B_HUMAN
AccessioniPrimary (citable) accession number: Q9BTA0
Secondary accession number(s): Q5TDH6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 27, 2003
Last sequence update: February 6, 2007
Last modified: April 29, 2015
This is version 90 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 1
    Human chromosome 1: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.