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Protein

Protein NipSnap homolog 3B

Gene

NIPSNAP3B

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Enzyme and pathway databases

BioCyciZFISH:ENSG00000165028-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein NipSnap homolog 3B
Short name:
NipSnap3B
Alternative name(s):
SNAP1
Gene namesi
Name:NIPSNAP3B
Synonyms:NIPSNAP3
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 9

Organism-specific databases

HGNCiHGNC:23641. NIPSNAP3B.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

DisGeNETi55335.
OpenTargetsiENSG00000165028.
PharmGKBiPA134947095.

Polymorphism and mutation databases

BioMutaiNIPSNAP3B.
DMDMi17380145.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002211541 – 247Protein NipSnap homolog 3BAdd BLAST247

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei45N6-succinyllysineBy similarity1
Modified residuei57N6-succinyllysineBy similarity1

Proteomic databases

EPDiQ9BS92.
MaxQBiQ9BS92.
PaxDbiQ9BS92.
PeptideAtlasiQ9BS92.
PRIDEiQ9BS92.

PTM databases

iPTMnetiQ9BS92.
PhosphoSitePlusiQ9BS92.

Expressioni

Gene expression databases

BgeeiENSG00000165028.
CleanExiHS_NIPSNAP3B.
ExpressionAtlasiQ9BS92. baseline and differential.
GenevisibleiQ9BS92. HS.

Organism-specific databases

HPAiHPA042491.
HPA047909.
HPA047925.
HPA049256.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000363894.

Structurei

3D structure databases

ProteinModelPortaliQ9BS92.
SMRiQ9BS92.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the NipSnap family.Curated

Phylogenomic databases

eggNOGiKOG2883. Eukaryota.
ENOG410XSWP. LUCA.
GeneTreeiENSGT00730000111003.
HOGENOMiHOG000007437.
HOVERGENiHBG052660.
InParanoidiQ9BS92.
OMAiYVLWWNE.
OrthoDBiEOG091G0MXA.
PhylomeDBiQ9BS92.
TreeFamiTF314501.

Family and domain databases

InterProiIPR011008. Dimeric_a/b-barrel.
IPR012577. NIPSNAP.
[Graphical view]
PfamiPF07978. NIPSNAP. 2 hits.
[Graphical view]
SUPFAMiSSF54909. SSF54909. 2 hits.

Sequencei

Sequence statusi: Complete.

Q9BS92-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLVLRSGLTK ALASRTLAPQ VCSSFATGPR QYDGTFYEFR TYYLKPSNMN
60 70 80 90 100
AFMENLKKNI HLRTSYSELV GFWSVEFGGR TNKVFHIWKY DNFAHRAEVR
110 120 130 140 150
KALANCKEWQ EQSIIPNLAR IDKQETEITY LIPWSKLEKP PKEGVYELAV
160 170 180 190 200
FQMKPGGPAL WGDAFERAIN AHVNLGYTKV VGVFHTEYGE LNRVHVLWWN
210 220 230 240
ESADSRAAGR HKSHEDPRVV AAVRESVNYL VSQQNMLLIP ASFSPLK
Length:247
Mass (Da):28,313
Last modified:June 1, 2001 - v1
Checksum:i3D979E5AD99FC318
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti190E → G in BAA92101 (PubMed:14702039).Curated1

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_05027794A → P.1 PublicationCorresponds to variant rs10761084dbSNPEnsembl.1
Natural variantiVAR_050278154K → E.Corresponds to variant rs3739740dbSNPEnsembl.1
Natural variantiVAR_050279159A → G.1 PublicationCorresponds to variant rs3739741dbSNPEnsembl.1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF287262 Genomic DNA. Translation: AAK43527.1.
AK002137 mRNA. Translation: BAA92101.1.
AL359846 Genomic DNA. Translation: CAH73582.1.
CH471105 Genomic DNA. Translation: EAW58991.1.
BC005202 mRNA. Translation: AAH05202.1.
BC017914 mRNA. Translation: AAH17914.1.
CCDSiCCDS6761.1.
RefSeqiNP_060846.2. NM_018376.3.
UniGeneiHs.429294.
Hs.720355.
Hs.732606.

Genome annotation databases

EnsembliENST00000374762; ENSP00000363894; ENSG00000165028.
GeneIDi55335.
KEGGihsa:55335.
UCSCiuc004bci.3. human.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF287262 Genomic DNA. Translation: AAK43527.1.
AK002137 mRNA. Translation: BAA92101.1.
AL359846 Genomic DNA. Translation: CAH73582.1.
CH471105 Genomic DNA. Translation: EAW58991.1.
BC005202 mRNA. Translation: AAH05202.1.
BC017914 mRNA. Translation: AAH17914.1.
CCDSiCCDS6761.1.
RefSeqiNP_060846.2. NM_018376.3.
UniGeneiHs.429294.
Hs.720355.
Hs.732606.

3D structure databases

ProteinModelPortaliQ9BS92.
SMRiQ9BS92.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000363894.

PTM databases

iPTMnetiQ9BS92.
PhosphoSitePlusiQ9BS92.

Polymorphism and mutation databases

BioMutaiNIPSNAP3B.
DMDMi17380145.

Proteomic databases

EPDiQ9BS92.
MaxQBiQ9BS92.
PaxDbiQ9BS92.
PeptideAtlasiQ9BS92.
PRIDEiQ9BS92.

Protocols and materials databases

DNASUi55335.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000374762; ENSP00000363894; ENSG00000165028.
GeneIDi55335.
KEGGihsa:55335.
UCSCiuc004bci.3. human.

Organism-specific databases

CTDi55335.
DisGeNETi55335.
GeneCardsiNIPSNAP3B.
HGNCiHGNC:23641. NIPSNAP3B.
HPAiHPA042491.
HPA047909.
HPA047925.
HPA049256.
MIMi608872. gene.
neXtProtiNX_Q9BS92.
OpenTargetsiENSG00000165028.
PharmGKBiPA134947095.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG2883. Eukaryota.
ENOG410XSWP. LUCA.
GeneTreeiENSGT00730000111003.
HOGENOMiHOG000007437.
HOVERGENiHBG052660.
InParanoidiQ9BS92.
OMAiYVLWWNE.
OrthoDBiEOG091G0MXA.
PhylomeDBiQ9BS92.
TreeFamiTF314501.

Enzyme and pathway databases

BioCyciZFISH:ENSG00000165028-MONOMER.

Miscellaneous databases

GenomeRNAii55335.
PROiQ9BS92.
SOURCEiSearch...

Gene expression databases

BgeeiENSG00000165028.
CleanExiHS_NIPSNAP3B.
ExpressionAtlasiQ9BS92. baseline and differential.
GenevisibleiQ9BS92. HS.

Family and domain databases

InterProiIPR011008. Dimeric_a/b-barrel.
IPR012577. NIPSNAP.
[Graphical view]
PfamiPF07978. NIPSNAP. 2 hits.
[Graphical view]
SUPFAMiSSF54909. SSF54909. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiNPS3B_HUMAN
AccessioniPrimary (citable) accession number: Q9BS92
Secondary accession number(s): Q5VX30, Q9NUM2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 26, 2001
Last sequence update: June 1, 2001
Last modified: November 30, 2016
This is version 117 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 9
    Human chromosome 9: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.