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Q9BRT6

- LLPH_HUMAN

UniProt

Q9BRT6 - LLPH_HUMAN

Protein

Protein LLP homolog

Gene

LLPH

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
  1. Functioni

    GO - Molecular functioni

    1. poly(A) RNA binding Source: UniProtKB

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein LLP homolog
    Alternative name(s):
    Protein LAPS18-like
    Gene namesi
    Name:LLPH
    Synonyms:C12orf31
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 12

    Organism-specific databases

    HGNCiHGNC:28229. LLPH.

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA164722116.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 129129Protein LLP homologPRO_0000274346Add
    BLAST

    Proteomic databases

    MaxQBiQ9BRT6.
    PaxDbiQ9BRT6.
    PRIDEiQ9BRT6.

    PTM databases

    PhosphoSiteiQ9BRT6.

    Expressioni

    Gene expression databases

    BgeeiQ9BRT6.
    CleanExiHS_LLPH.
    GenevestigatoriQ9BRT6.

    Interactioni

    Protein-protein interaction databases

    BioGridi124024. 5 interactions.
    IntActiQ9BRT6. 3 interactions.
    MINTiMINT-1468069.
    STRINGi9606.ENSP00000266604.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9BRT6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi3 – 125123Lys-richAdd
    BLAST

    Sequence similaritiesi

    Belongs to the learning-associated protein family.Curated

    Phylogenomic databases

    eggNOGiNOG299149.
    HOGENOMiHOG000004847.
    HOVERGENiHBG081232.
    InParanoidiQ9BRT6.
    OMAiQYPVWMN.
    OrthoDBiEOG76T9V7.
    PhylomeDBiQ9BRT6.
    TreeFamiTF314654.

    Family and domain databases

    InterProiIPR018784. LAPS18-like.
    [Graphical view]
    PfamiPF10169. Laps. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q9BRT6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAKSLRSKWK RKMRAEKRKK NAPKEASRLK SILKLDGDVL MKDVQEIATV    50
    VVPKPKHCQE KMQCEVKDEK DDMKMETDIK RNKKTLLDQH GQYPIWMNQR 100
    QRKRLKAKRE KRKGKSKAKA VKVAKGLAW 129
    Length:129
    Mass (Da):15,225
    Last modified:June 1, 2001 - v1
    Checksum:i71C2CE6F79B63E4D
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti76 – 761E → G in AAI07781. (PubMed:15489334)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK091568 mRNA. Translation: BAC03699.1.
    BC006002 mRNA. Translation: AAH06002.1.
    BC070232 mRNA. Translation: AAH70232.1.
    BC107780 mRNA. Translation: AAI07781.1.
    CCDSiCCDS8974.1.
    RefSeqiNP_115714.1. NM_032338.3.
    UniGeneiHs.504820.

    Genome annotation databases

    EnsembliENST00000266604; ENSP00000266604; ENSG00000139233.
    ENST00000446587; ENSP00000437372; ENSG00000139233.
    GeneIDi84298.
    KEGGihsa:84298.
    UCSCiuc010ssw.2. human.

    Polymorphism databases

    DMDMi74732927.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK091568 mRNA. Translation: BAC03699.1 .
    BC006002 mRNA. Translation: AAH06002.1 .
    BC070232 mRNA. Translation: AAH70232.1 .
    BC107780 mRNA. Translation: AAI07781.1 .
    CCDSi CCDS8974.1.
    RefSeqi NP_115714.1. NM_032338.3.
    UniGenei Hs.504820.

    3D structure databases

    ProteinModelPortali Q9BRT6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 124024. 5 interactions.
    IntActi Q9BRT6. 3 interactions.
    MINTi MINT-1468069.
    STRINGi 9606.ENSP00000266604.

    PTM databases

    PhosphoSitei Q9BRT6.

    Polymorphism databases

    DMDMi 74732927.

    Proteomic databases

    MaxQBi Q9BRT6.
    PaxDbi Q9BRT6.
    PRIDEi Q9BRT6.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000266604 ; ENSP00000266604 ; ENSG00000139233 .
    ENST00000446587 ; ENSP00000437372 ; ENSG00000139233 .
    GeneIDi 84298.
    KEGGi hsa:84298.
    UCSCi uc010ssw.2. human.

    Organism-specific databases

    CTDi 84298.
    GeneCardsi GC12M066516.
    HGNCi HGNC:28229. LLPH.
    neXtProti NX_Q9BRT6.
    PharmGKBi PA164722116.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi NOG299149.
    HOGENOMi HOG000004847.
    HOVERGENi HBG081232.
    InParanoidi Q9BRT6.
    OMAi QYPVWMN.
    OrthoDBi EOG76T9V7.
    PhylomeDBi Q9BRT6.
    TreeFami TF314654.

    Miscellaneous databases

    ChiTaRSi LLPH. human.
    GenomeRNAii 84298.
    NextBioi 73956.
    PROi Q9BRT6.

    Gene expression databases

    Bgeei Q9BRT6.
    CleanExi HS_LLPH.
    Genevestigatori Q9BRT6.

    Family and domain databases

    InterProi IPR018784. LAPS18-like.
    [Graphical view ]
    Pfami PF10169. Laps. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
      Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
      , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
      Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Brain.
    2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Kidney and Skeletal muscle.

    Entry informationi

    Entry nameiLLPH_HUMAN
    AccessioniPrimary (citable) accession number: Q9BRT6
    Secondary accession number(s): Q3B766
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 6, 2007
    Last sequence update: June 1, 2001
    Last modified: October 1, 2014
    This is version 86 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 12
      Human chromosome 12: entries, gene names and cross-references to MIM
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3