Q9BRR9 (RHG09_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 106.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Rho GTPase-activating protein 9 Alternative name(s): Rho-type GTPase-activating protein 9 | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 750 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state. Has a substantial GAP activity toward CDC42 and RAC1 and less toward RHOA. Has a role in regulating adhesion of hematopoietic cells to the extracellular matrix. Ref.1 |
| Subunit structure | Interacts with FASLG. Ref.7 |
| Tissue specificity | Predominantly expressed in peripheral blood leukocytes, spleen, and thymus. Ref.1 |
| Sequence similarities | Contains 1 PH domain. Contains 1 Rho-GAP domain. Contains 1 SH3 domain. Contains 1 WW domain. |
Ontologies
| Keywords | |
|---|---|
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | SH3 domain |
| Molecular function | GTPase activation |
| PTM | Phosphoprotein |
| Technical term | 3D-structure Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | regulation of small GTPase mediated signal transduction Traceable author statement. Source: Reactome small GTPase mediated signal transductionTraceable author statement. Source: Reactome |
| Cellular_component | cytosol Traceable author statement. Source: Reactome |
| Molecular_function | GTPase activator activity Inferred from direct assay Ref.1. Source: MGI phospholipid bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Alternative products
| This entry describes 5 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9BRR9-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9BRR9-2) The sequence of this isoform differs from the canonical sequence as follows: 438-456: Missing. | ||||||
| Isoform 3 (identifier: Q9BRR9-3) The sequence of this isoform differs from the canonical sequence as follows: 1-184: Missing. | ||||||
| Isoform 4 (identifier: Q9BRR9-4) The sequence of this isoform differs from the canonical sequence as follows: 1-184: Missing. 438-456: Missing. | ||||||
| Isoform 5 (identifier: Q9BRR9-5) The sequence of this isoform differs from the canonical sequence as follows: 438-456: Missing. 659-750: ALSESEQCLS...MLTNFTSLFP → G | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||||||||||||||||||
Molecule processing | |||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 750 | 750 | Rho GTPase-activating protein 9 | PRO_0000056712 | |||||||||||||||||||||||
Regions | |||||||||||||||||||||||||||
| Domain | 22 – 88 | 67 | SH3 | ||||||||||||||||||||||||
| Domain | 213 – 247 | 35 | WW | ||||||||||||||||||||||||
| Domain | 322 – 435 | 114 | PH | ||||||||||||||||||||||||
| Domain | 542 – 749 | 208 | Rho-GAP | ||||||||||||||||||||||||
Amino acid modifications | |||||||||||||||||||||||||||
| Modified residue | 475 | 1 | Phosphoserine Ref.8 | ||||||||||||||||||||||||
Natural variations | |||||||||||||||||||||||||||
| Alternative sequence | 1 – 184 | 184 | Missing in isoform 3 and isoform 4. | VSP_010340 | |||||||||||||||||||||||
| Alternative sequence | 438 – 456 | 19 | Missing in isoform 2, isoform 4 and isoform 5. | VSP_010325 | |||||||||||||||||||||||
| Alternative sequence | 659 – 750 | 92 | ALSES…TSLFP → G in isoform 5. | VSP_046391 | |||||||||||||||||||||||
| Natural variant | 50 | 1 | R → G. Corresponds to variant rs33927108 [ dbSNP | Ensembl ]. | VAR_055830 | |||||||||||||||||||||||
| Natural variant | 137 | 1 | R → C. Corresponds to variant rs3802989 [ dbSNP | Ensembl ]. | VAR_055831 | |||||||||||||||||||||||
| Natural variant | 370 | 1 | S → A. Ref.3 Ref.5 Corresponds to variant rs11544238 [ dbSNP | Ensembl ]. | VAR_055832 | |||||||||||||||||||||||
Experimental info | |||||||||||||||||||||||||||
| Sequence conflict | 152 | 1 | L → F in AAH06107. Ref.2 | ||||||||||||||||||||||||
| Sequence conflict | 195 | 1 | V → A in BAC03969. Ref.3 | ||||||||||||||||||||||||
Secondary structure | |||||||||||||||||||||||||||
Helix Strand Turn | |||||||||||||||||||||||||||
| Beta strand | 322 – 336 | 15 | |||||||||||||||||||||||||
| Beta strand | 346 – 361 | 16 | |||||||||||||||||||||||||
| Helix | 368 – 370 | 3 | |||||||||||||||||||||||||
| Beta strand | 380 – 384 | 5 | |||||||||||||||||||||||||
| Beta strand | 389 – 392 | 4 | |||||||||||||||||||||||||
| Turn | 394 – 396 | 3 | |||||||||||||||||||||||||
| Beta strand | 398 – 406 | 9 | |||||||||||||||||||||||||
| Beta strand | 412 – 416 | 5 | |||||||||||||||||||||||||
| Helix | 420 – 439 | 20 | |||||||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Isolation of a novel human gene, ARHGAP9, encoding a rho-GTPase activating protein." Furukawa Y., Kawasoe T., Daigo Y., Nishiwaki T., Ishiguro H., Takahashi M., Kitayama J., Nakamura Y. Biochem. Biophys. Res. Commun. 284:643-649(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), FUNCTION, TISSUE SPECIFICITY. |
| [2] | "Isolation, mapping, and characterization of a novel member of human rho-GAP family." Kawasoe T., Furukawa Y., Daigo Y., Nishiwaki T., Ishiguro H., Fujita M., Ogawa M., Nakamura Y. Submitted (JUL-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 3). |
| [3] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 4 AND 5), VARIANT ALA-370. Tissue: Small intestine and Spleen. |
| [4] | "The finished DNA sequence of human chromosome 12." Scherer S.E., Muzny D.M., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J., Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R. Gibbs R.A.Nature 440:346-351(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2), VARIANT ALA-370. Tissue: Lymph and Muscle. |
| [6] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 384-750 (ISOFORM 2). Tissue: Lymph node. |
| [7] | "Identification of SH3 domain interaction partners of human FasL (CD178) by phage display screening." Voss M., Lettau M., Janssen O. BMC Immunol. 10:53-53(2009) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH FASLG. |
| [8] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-475, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AB051853 mRNA. Translation: BAB56159.1. AB030239 mRNA. Translation: BAB83128.1. AK092763 mRNA. Translation: BAC03969.1. AK301095 mRNA. Translation: BAG62695.1. AC022506 Genomic DNA. No translation available. BC006107 mRNA. Translation: AAH06107.1. BC011820 mRNA. Translation: AAH11820.1. AL713803 mRNA. Translation: CAD28552.1. | ||||||||||||||||||||||||
| IPI | IPI00414939. IPI00442053. IPI00793722. IPI00872303. IPI00939640. | ||||||||||||||||||||||||
| PIR | JC7701. | ||||||||||||||||||||||||
| RefSeq | NP_001073625.1. NM_001080156.1. NP_001073626.1. NM_001080157.1. NP_115885.2. NM_032496.2. | ||||||||||||||||||||||||
| UniGene | Hs.437126. | ||||||||||||||||||||||||
3D structure databases | |||||||||||||||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||||||||||||||
| ProteinModelPortal | Q9BRR9. | ||||||||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||||||||
| IntAct | Q9BRR9. 7 interactions. | ||||||||||||||||||||||||
| MINT | MINT-1190172. | ||||||||||||||||||||||||
| STRING | 9606.ENSP00000377380. | ||||||||||||||||||||||||
PTM databases | |||||||||||||||||||||||||
| PhosphoSite | Q9BRR9. | ||||||||||||||||||||||||
Polymorphism databases | |||||||||||||||||||||||||
| DMDM | 47117294. | ||||||||||||||||||||||||
Proteomic databases | |||||||||||||||||||||||||
| PaxDb | Q9BRR9. | ||||||||||||||||||||||||
| PRIDE | Q9BRR9. | ||||||||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||||||||
| DNASU | 64333. | ||||||||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||||||||
Genome annotation databases | |||||||||||||||||||||||||
| Ensembl | ENST00000356411; ENSP00000348782; ENSG00000123329. ENST00000393791; ENSP00000377380; ENSG00000123329. ENST00000424809; ENSP00000394307; ENSG00000123329. ENST00000430041; ENSP00000397950; ENSG00000123329. | ||||||||||||||||||||||||
| GeneID | 64333. | ||||||||||||||||||||||||
| KEGG | hsa:64333. | ||||||||||||||||||||||||
| UCSC | uc001soa.3. human. uc001soc.3. human. | ||||||||||||||||||||||||
Organism-specific databases | |||||||||||||||||||||||||
| CTD | 64333. | ||||||||||||||||||||||||
| GeneCards | GC12M057866. | ||||||||||||||||||||||||
| H-InvDB | HIX0010768. | ||||||||||||||||||||||||
| HGNC | HGNC:14130. ARHGAP9. | ||||||||||||||||||||||||
| HPA | HPA051447. | ||||||||||||||||||||||||
| MIM | 610576. gene. | ||||||||||||||||||||||||
| neXtProt | NX_Q9BRR9. | ||||||||||||||||||||||||
| PharmGKB | PA24962. | ||||||||||||||||||||||||
| GenAtlas | Search... | ||||||||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||||||||
| eggNOG | NOG279563. | ||||||||||||||||||||||||
| HOGENOM | HOG000294167. | ||||||||||||||||||||||||
| HOVERGEN | HBG005328. | ||||||||||||||||||||||||
| InParanoid | Q9BRR9. | ||||||||||||||||||||||||
| PhylomeDB | Q9BRR9. | ||||||||||||||||||||||||
Enzyme and pathway databases | |||||||||||||||||||||||||
| Reactome | REACT_111102. Signal Transduction. | ||||||||||||||||||||||||
Gene expression databases | |||||||||||||||||||||||||
| ArrayExpress | Q9BRR9. | ||||||||||||||||||||||||
| Bgee | Q9BRR9. | ||||||||||||||||||||||||
| CleanEx | HS_ARHGAP9. | ||||||||||||||||||||||||
| Genevestigator | Q9BRR9. | ||||||||||||||||||||||||
| GermOnline | ENSG00000123329. Homo sapiens. | ||||||||||||||||||||||||
Family and domain databases | |||||||||||||||||||||||||
| Gene3D | 1.10.555.10. 1 hit. 2.30.29.30. 1 hit. | ||||||||||||||||||||||||
| InterPro | IPR011993. PH_like_dom. IPR001849. Pleckstrin_homology. IPR015767. Rho_GTPase_activating. IPR008936. Rho_GTPase_activation_prot. IPR000198. RhoGAP_dom. IPR001452. SH3_domain. IPR001202. WW_dom. [Graphical view] | ||||||||||||||||||||||||
| PANTHER | PTHR23181. PTHR23181. 1 hit. | ||||||||||||||||||||||||
| Pfam | PF00169. PH. 1 hit. PF00620. RhoGAP. 1 hit. PF00018. SH3_1. 1 hit. [Graphical view] | ||||||||||||||||||||||||
| SMART | SM00233. PH. 1 hit. SM00324. RhoGAP. 1 hit. SM00326. SH3. 1 hit. [Graphical view] | ||||||||||||||||||||||||
| SUPFAM | SSF48350. Rho_GAP. 1 hit. SSF50044. SH3. 1 hit. | ||||||||||||||||||||||||
| PROSITE | PS50003. PH_DOMAIN. 1 hit. PS50238. RHOGAP. 1 hit. PS50002. SH3. 1 hit. PS01159. WW_DOMAIN_1. False negative. PS50020. WW_DOMAIN_2. 1 hit. [Graphical view] | ||||||||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||||||||
Other | |||||||||||||||||||||||||
| ChiTaRS | ARHGAP9. human. | ||||||||||||||||||||||||
| EvolutionaryTrace | Q9BRR9. | ||||||||||||||||||||||||
| GenomeRNAi | 64333. | ||||||||||||||||||||||||
| NextBio | 66267. | ||||||||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||||||||
Entry information
| Entry name | RHG09_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9BRR9 Secondary accession number(s): B4DVI3 Q96S74 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 12 Human chromosome 12: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with
