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Protein

F-box-like/WD repeat-containing protein TBL1Y

Gene

TBL1Y

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

F-box-like protein involved in the recruitment of the ubiquitin/19S proteasome complex to nuclear receptor-regulated transcription units. Plays an essential role in transcription activation mediated by nuclear receptors. Probably acts as integral component of corepressor complexes that mediates the recruitment of the 19S proteasome complex, leading to the subsequent proteasomal degradation of transcription repressor complexes, thereby allowing cofactor exchange (By similarity).By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionActivator
Biological processTranscription, Transcription regulation, Ubl conjugation pathway

Enzyme and pathway databases

SignaLinkiQ9BQ87.

Names & Taxonomyi

Protein namesi
Recommended name:
F-box-like/WD repeat-containing protein TBL1Y
Alternative name(s):
Transducin beta-like protein 1Y
Transducin-beta-like protein 1, Y-linked
Gene namesi
Name:TBL1Y
Synonyms:TBL1
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome Y

Organism-specific databases

EuPathDBiHostDB:ENSG00000092377.13.
HGNCiHGNC:18502. TBL1Y.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

Pathology & Biotechi

Organism-specific databases

DisGeNETi90665.
OpenTargetsiENSG00000092377.
PharmGKBiPA38564.

Polymorphism and mutation databases

BioMutaiTBL1Y.
DMDMi23396873.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000512641 – 522F-box-like/WD repeat-containing protein TBL1YAdd BLAST522

Proteomic databases

EPDiQ9BQ87.
MaxQBiQ9BQ87.
PaxDbiQ9BQ87.
PeptideAtlasiQ9BQ87.
PRIDEiQ9BQ87.

PTM databases

iPTMnetiQ9BQ87.
PhosphoSitePlusiQ9BQ87.

Expressioni

Tissue specificityi

Fetal brain and prostate.1 Publication

Gene expression databases

BgeeiENSG00000092377.
CleanExiHS_TBL1Y.
ExpressionAtlasiQ9BQ87. baseline and differential.
GenevisibleiQ9BQ87. HS.

Organism-specific databases

HPAiHPA060073.

Interactioni

Subunit structurei

Probable component of the N-Cor repressor complex and some E3 ubiquitin ligase complex.By similarity

Protein-protein interaction databases

BioGridi124751. 30 interactors.
CORUMiQ9BQ87.
IntActiQ9BQ87. 2 interactors.
STRINGi9606.ENSP00000328879.

Structurei

3D structure databases

ProteinModelPortaliQ9BQ87.
SMRiQ9BQ87.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 36LisHPROSITE-ProRule annotationAdd BLAST33
Domaini41 – 86F-box-likeAdd BLAST46
Repeati177 – 216WD 1Add BLAST40
Repeati233 – 272WD 2Add BLAST40
Repeati274 – 313WD 3Add BLAST40
Repeati316 – 354WD 4Add BLAST39
Repeati357 – 396WD 5Add BLAST40
Repeati399 – 447WD 6Add BLAST49
Repeati450 – 489WD 7Add BLAST40
Repeati491 – 521WD 8Add BLAST31

Domaini

The F-box-like domain is related to the F-box domain, and apparently displays the same function as component of ubiquitin E3 ligase complexes.By similarity

Sequence similaritiesi

Belongs to the WD repeat EBI family.Curated

Keywords - Domaini

Repeat, WD repeat

Phylogenomic databases

eggNOGiKOG0273. Eukaryota.
ENOG410XRSY. LUCA.
GeneTreeiENSGT00890000139430.
HOGENOMiHOG000220902.
HOVERGENiHBG050240.
InParanoidiQ9BQ87.
KOiK04508.
OMAiENGAHEI.
OrthoDBiEOG091G04MW.
PhylomeDBiQ9BQ87.
TreeFamiTF323190.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiView protein in InterPro
IPR020472. G-protein_beta_WD-40_rep.
IPR006594. LisH.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
PfamiView protein in Pfam
PF08513. LisH. 1 hit.
PF00400. WD40. 6 hits.
PRINTSiPR00320. GPROTEINBRPT.
SMARTiView protein in SMART
SM00667. LisH. 1 hit.
SM00320. WD40. 8 hits.
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiView protein in PROSITE
PS50896. LISH. 1 hit.
PS00678. WD_REPEATS_1. 4 hits.
PS50082. WD_REPEATS_2. 6 hits.
PS50294. WD_REPEATS_REGION. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9BQ87-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSITSDEVNF LVYRYLQESG FSHSAFTFGI ESHISQSNIN GTLVPPSALI
60 70 80 90 100
SILQKGLQYV EAEISINKDG TVFDSRPIES LSLIVAVIPD VVQMRQQAFG
110 120 130 140 150
EKLTQQQASA AATEASAMAK AATMTPAAIS QQNPPKNREA TVNGEENGAH
160 170 180 190 200
EINNHSKPME IDGDVEIPPN KATVLRGHES EVFICAWNPV SDLLASGSGD
210 220 230 240 250
STARIWNLNE NSNGGSTQLV LRHCIREGGH DVPSNKDVTS LDWNSDGTLL
260 270 280 290 300
AMGSYDGFAR IWTENGNLAS TLGQHKGPIF ALKWNKKGNY VLSAGVDKTT
310 320 330 340 350
IIWDAHTGEA KQQFPFHSAP ALDVDWQNNM TFASCSTDMC IHVCRLGCDH
360 370 380 390 400
PVKTFQGHTN EVNAIKWDPS GMLLASCSDD MTLKIWSMKQ DACVHDLQAH
410 420 430 440 450
SKEIYTIKWS PTGPATSNPN SSIMLASASF DSTVRLWDVE QGVCTHTLMK
460 470 480 490 500
HQEPVYSVAF SPDGKYLASG SFDKYVHIWN TQSGSLVHSY QGTGGIFEVC
510 520
WNARGDKVGA SASDGSVCVL DL
Length:522
Mass (Da):56,688
Last modified:June 1, 2001 - v1
Checksum:i4E020216422442D8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF332220 mRNA. Translation: AAK13472.1.
AF332221 mRNA. Translation: AAK13473.1.
AF332222 mRNA. Translation: AAK13474.1.
CH471163 Genomic DNA. Translation: EAW59126.1.
BC130471 mRNA. Translation: AAI30472.1.
BC130473 mRNA. Translation: AAI30474.1.
CCDSiCCDS14779.1.
RefSeqiNP_150600.1. NM_033284.1.
NP_599020.1. NM_134258.1.
NP_599021.1. NM_134259.1.
UniGeneiHs.664560.

Genome annotation databases

EnsembliENST00000346432; ENSP00000328879; ENSG00000092377.
ENST00000355162; ENSP00000347289; ENSG00000092377.
ENST00000383032; ENSP00000372499; ENSG00000092377.
GeneIDi90665.
KEGGihsa:90665.
UCSCiuc004frb.3. human.

Similar proteinsi

Entry informationi

Entry nameiTBL1Y_HUMAN
AccessioniPrimary (citable) accession number: Q9BQ87
Secondary accession number(s): A1L4B3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 19, 2002
Last sequence update: June 1, 2001
Last modified: September 27, 2017
This is version 135 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome Y
    Human chromosome Y: entries, gene names and cross-references to MIM
  2. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  3. SIMILARITY comments
    Index of protein domains and families