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Protein

Uncharacterized protein C19orf43

Gene

C19orf43

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C19orf43
Gene namesi
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 19

Organism-specific databases

HGNCiHGNC:28424. C19orf43.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA144596476.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 176176Uncharacterized protein C19orf43PRO_0000280762Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei146 – 1461N6-acetyllysine1 Publication

Keywords - PTMi

Acetylation

Proteomic databases

MaxQBiQ9BQ61.
PaxDbiQ9BQ61.
PeptideAtlasiQ9BQ61.
PRIDEiQ9BQ61.

PTM databases

PhosphoSiteiQ9BQ61.

Expressioni

Gene expression databases

BgeeiQ9BQ61.
CleanExiHS_C19orf43.
ExpressionAtlasiQ9BQ61. baseline and differential.
GenevestigatoriQ9BQ61.

Organism-specific databases

HPAiHPA059965.

Interactioni

Protein-protein interaction databases

BioGridi122473. 6 interactions.
IntActiQ9BQ61. 4 interactions.
MINTiMINT-3060318.
STRINGi9606.ENSP00000242784.

Structurei

3D structure databases

ProteinModelPortaliQ9BQ61.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi20 – 256Poly-Gly

Phylogenomic databases

eggNOGiNOG45830.
GeneTreeiENSGT00390000012267.
HOGENOMiHOG000111989.
HOVERGENiHBG081358.
InParanoidiQ9BQ61.
OMAiTGMVAKK.
PhylomeDBiQ9BQ61.
TreeFamiTF323808.

Sequencei

Sequence statusi: Complete.

Q9BQ61-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAARGRRAEP QGREAPGPAG GGGGGSRWAE SGSGTSPESG DEEVSGAGSS
60 70 80 90 100
PVSGGVNLFA NDGSFLELFK RKMEEEQRQR QEEPPPGPQR PDQSAAAAGP
110 120 130 140 150
GDPKRKGGPG STLSFVGKRR GGNKLALKTG IVAKKQKTED EVLTSKGDAW
160 170
AKYMAEVKKY KAHQCGDDDK TRPLVK
Length:176
Mass (Da):18,419
Last modified:June 1, 2001 - v1
Checksum:i7A96B523F5C05CB5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC000216 mRNA. Translation: AAH00216.1.
BC004533 mRNA. Translation: AAH04533.1.
BC015347 mRNA. Translation: AAH15347.1.
CCDSiCCDS12279.1.
RefSeqiNP_076943.1. NM_024038.2.
UniGeneiHs.515155.

Genome annotation databases

EnsembliENST00000242784; ENSP00000242784; ENSG00000123144.
GeneIDi79002.
KEGGihsa:79002.
UCSCiuc002muu.3. human.

Polymorphism databases

DMDMi74732813.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC000216 mRNA. Translation: AAH00216.1.
BC004533 mRNA. Translation: AAH04533.1.
BC015347 mRNA. Translation: AAH15347.1.
CCDSiCCDS12279.1.
RefSeqiNP_076943.1. NM_024038.2.
UniGeneiHs.515155.

3D structure databases

ProteinModelPortaliQ9BQ61.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi122473. 6 interactions.
IntActiQ9BQ61. 4 interactions.
MINTiMINT-3060318.
STRINGi9606.ENSP00000242784.

PTM databases

PhosphoSiteiQ9BQ61.

Polymorphism databases

DMDMi74732813.

Proteomic databases

MaxQBiQ9BQ61.
PaxDbiQ9BQ61.
PeptideAtlasiQ9BQ61.
PRIDEiQ9BQ61.

Protocols and materials databases

DNASUi79002.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000242784; ENSP00000242784; ENSG00000123144.
GeneIDi79002.
KEGGihsa:79002.
UCSCiuc002muu.3. human.

Organism-specific databases

CTDi79002.
GeneCardsiGC19M012841.
H-InvDBHIX0014801.
HGNCiHGNC:28424. C19orf43.
HPAiHPA059965.
neXtProtiNX_Q9BQ61.
PharmGKBiPA144596476.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG45830.
GeneTreeiENSGT00390000012267.
HOGENOMiHOG000111989.
HOVERGENiHBG081358.
InParanoidiQ9BQ61.
OMAiTGMVAKK.
PhylomeDBiQ9BQ61.
TreeFamiTF323808.

Miscellaneous databases

ChiTaRSiC19orf43. human.
GenomeRNAii79002.
NextBioi67621.

Gene expression databases

BgeeiQ9BQ61.
CleanExiHS_C19orf43.
ExpressionAtlasiQ9BQ61. baseline and differential.
GenevestigatoriQ9BQ61.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Brain, Muscle and Placenta.
  2. "Lysine acetylation targets protein complexes and co-regulates major cellular functions."
    Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T.C., Olsen J.V., Mann M.
    Science 325:834-840(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-146, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiCS043_HUMAN
AccessioniPrimary (citable) accession number: Q9BQ61
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 20, 2007
Last sequence update: June 1, 2001
Last modified: January 7, 2015
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 19
    Human chromosome 19: entries, gene names and cross-references to MIM

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.