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Protein

CLAVATA3/ESR (CLE)-related protein 1

Gene

CLE1

Organism
Heterodera glycines (Soybean cyst nematode worm)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Mimics host plant CLE extracellular signal peptides that regulate cell fate. May play a role in the differentiation or division of feeding cells (syncytia) induced in plant roots during infection (By similarity).By similarity2 Publications

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Differentiation

Names & Taxonomyi

Protein namesi
Recommended name:
CLAVATA3/ESR (CLE)-related protein 1
Short name:
CLE-like peptide 1
Short name:
Hg-SYV46
Alternative name(s):
Esophageal gland cell secretory protein 1
Gene namesi
Name:CLE1
Synonyms:2B10, HSP1, SYV46
OrganismiHeterodera glycines (Soybean cyst nematode worm)
Taxonomic identifieri51029 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaTylenchidaTylenchinaTylenchoideaHeteroderidaeHeteroderinaeHeterodera

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Apoplast, Host cytoplasm, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222Sequence analysisAdd
BLAST
Chaini23 – 139117CLAVATA3/ESR (CLE)-related protein 1PRO_0000401215Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi37 – 371N-linked (GlcNAc...)Sequence analysis
Glycosylationi87 – 871N-linked (GlcNAc...)Sequence analysis

Keywords - PTMi

Glycoprotein

Expressioni

Tissue specificityi

Highly expressed exclusively within the dorsal esophageal gland cell during syncytium formation in host plants (at protein level).4 Publications

Developmental stagei

Strongly up-regulated during root colonization, from the onset of syncytium formation by parasitic second-stage juveniles (pJ2) through the J3?J4 molts of sedentary life stages that become adult females.1 Publication

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni23 – 9068Required for secretion from the host cytoplasm to the host apoplasmAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili100 – 12526Sequence analysisAdd
BLAST

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi128 – 13912CLEAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi92 – 965Poly-Pro

Sequence similaritiesi

Belongs to the CLV3/ESR signal peptide family.Curated

Keywords - Domaini

Coiled coil, Signal

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9BN21-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPNIFKILLI VLLAVVSFRL SASTGDKKTA NDGSGNNSSA GIGTKIKRIV
60 70 80 90 100
TAGLLFTSLA TGGAEAIGRS NAQGGNAAGL VPSHLTNRSM APPPPPAQFE
110 120 130
KGAATRVEKM RAQLRELAEK MTDKDPKRLS PSGPDPHHH
Length:139
Mass (Da):14,504
Last modified:June 1, 2001 - v1
Checksum:iB29F9676CA3A73BC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF273728 mRNA. Translation: AAG21331.2.
FJ503004 Genomic DNA. Translation: ACT32609.1.

Cross-referencesi

Web resourcesi

Protein Spotlight

the root of the problem - Issue 151 of July 2013

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF273728 mRNA. Translation: AAG21331.2.
FJ503004 Genomic DNA. Translation: ACT32609.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiCLE1_HETGL
AccessioniPrimary (citable) accession number: Q9BN21
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 30, 2010
Last sequence update: June 1, 2001
Last modified: June 8, 2016
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Miscellaneous

Failed to trigger CLE-like cell fate regulation in Arabidopsis thaliana, a non-host plant.

Documents

  1. Protein Spotlight
    Protein Spotlight articles and cited UniProtKB/Swiss-Prot entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.