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Protein
Submitted name:

TUBby-related

Gene

tub-2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-CEL-8951664 Neddylation
SignaLinkiQ9BL53

Names & Taxonomyi

Protein namesi
Submitted name:
TUBby-relatedImported
Gene namesi
Name:tub-2Imported
ORF Names:CELE_Y71G12A.3Imported, Y71G12A.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiY71G12A.3a ; CE30571 ; WBGene00022139 ; tub-2

Subcellular locationi

PTM / Processingi

Proteomic databases

EPDiQ9BL53
PaxDbiQ9BL53
PeptideAtlasiQ9BL53

Expressioni

Gene expression databases

BgeeiWBGene00022139
ExpressionAtlasiQ9BL53 baseline and differential

Interactioni

Protein-protein interaction databases

IntActiQ9BL53, 1 interactor
MINTiQ9BL53
STRINGi6239.Y71G12A.3

Structurei

3D structure databases

ProteinModelPortaliQ9BL53
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini65 – 106WD_REPEATS_REGIONInterPro annotationAdd BLAST42
Repeati65 – 96WDPROSITE-ProRule annotationAdd BLAST32

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili729 – 749Sequence analysisAdd BLAST21
Coiled coili752 – 772Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the TUB family.SAAS annotation

Keywords - Domaini

Coiled coilSequence analysis, WD repeatPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG2503 Eukaryota
ENOG410YEKG LUCA
GeneTreeiENSGT00610000085970
HOGENOMiHOG000022247
InParanoidiQ9BL53
OMAiYNFNLRG
OrthoDBiEOG091G0YBE
PhylomeDBiQ9BL53

Family and domain databases

Gene3Di2.130.10.10, 1 hit
3.20.90.10, 1 hit
InterProiView protein in InterPro
IPR025659 Tubby-like_C
IPR000007 Tubby_C
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR017986 WD40_repeat_dom
PfamiView protein in Pfam
PF01167 Tub, 1 hit
PRINTSiPR01573 SUPERTUBBY
SMARTiView protein in SMART
SM00320 WD40, 2 hits
SUPFAMiSSF54518 SSF54518, 2 hits
PROSITEiView protein in PROSITE
PS50082 WD_REPEATS_2, 1 hit
PS50294 WD_REPEATS_REGION, 1 hit

Sequencei

Sequence statusi: Complete.

Q9BL53-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKILWESDWQ GARIEQTITH LSWIQQQDKP DHGLLGVGTE TGSVGVTLTD
60 70 80 90 100
FKPTPDDLTR YNFNLRGHHN AIRMVTWNKS QSKLASCDAS GIIYVWVRND
110 120 130 140 150
DRWSVELVND RGVKVSDLSW SPCGGSALIC YDDNFVLIGS ANGQRVWSNS
160 170 180 190 200
FPLPAAVTCG VWAPDSRQLV LGFSTGTIQV LSNAGVNITS RSFTEDKLTQ
210 220 230 240 250
MAFSPLRTKV REVEWTLAML SSANKIYMIS AYDQLHPAIY RSKFQVIRME
260 270 280 290 300
WNTDGTILAL INANNELVMI DTTCRVIHRE RIPIADKEKT LIPNPPPTQK
310 320 330 340 350
LTAFTWAHNG NVVIIAAGGC LTVGRILFGV PSLFEIVTYD LWKMMGCSSK
360 370 380 390 400
KVDKLPIPLK EMNALRELDH HVIRCRIPRS QDMCSYVCSV VDARCYCTIR
410 420 430 440 450
PLARGSHTYV LCFEHLGGLV PLLLGRQVNR FLPQFQIFMY QSKPPTSSPP
460 470 480 490 500
SGSSAQVEDV NSIFRYSTGR NSLWRRSKRQ IRALMSRHVR PTRPDTRLLQ
510 520 530 540 550
VTSNVWCTRF NISSLSPSLL PTFLGQVIYK TSVLHLQPRQ MTIDLAVLQR
560 570 580 590 600
KDGKELPEAS VDGTTHMTSS PDQGLTSEER QFFQKILAEC LSLRAVINSS
610 620 630 640 650
NFGKPPPPAA ASTISLPCQP STSKEPDSSA HTTPISTRTV ESKHDVTSMA
660 670 680 690 700
SSVSTWHEEI EALAFIDGDA DEKAMLVQPA LKTGWAAMEQ ASKKDAEVIR
710 720 730 740 750
SHVDKLASIA EQLSKRHGDF NVKRDKASIN KMRSQMKTLL RRVNEIEQKV
760 770 780 790 800
ANGDVKTEVR QLLNTLNEMK KALGEGVPKS GRSLNSTCKI ETMTNKTPFW
810 820 830 840 850
NEQNQVYQLD FGGRVTQESA KNFQIELDSK QVLQFGRIEG GSYTLDFRYP
860
FSAAQAFAVA LASITQRLK
Length:869
Mass (Da):97,188
Last modified:June 1, 2002 - v2
Checksum:i9CF71FEF30E1EAF3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA Translation: CCD72996.1
RefSeqiNP_490913.2, NM_058512.4
UniGeneiCel.24853

Genome annotation databases

EnsemblMetazoaiY71G12A.3a; Y71G12A.3a; WBGene00022139
GeneIDi171758
KEGGicel:CELE_Y71G12A.3
UCSCiY71G12A.3 c. elegans

Similar proteinsi

Entry informationi

Entry nameiQ9BL53_CAEEL
AccessioniPrimary (citable) accession number: Q9BL53
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2002
Last modified: May 23, 2018
This is version 141 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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