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Unreviewed, UniProtKB/TrEMBL Q9BH43 (Q9BH43_CAEEL)

Last modified June 16, 2009. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Protein F11E6.1b, partially confirmed by transcript evidence EMBL CAC35813.1
Gene names
ORF Names: F11E6.1 WormBase WBGene00008706 WormPep F11E6.1b, F11E6.1B
OrganismCaenorhabditis elegans [Complete proteome]
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryotaMetazoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length522 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

Sequences

Sequence LengthMass (Da)Tools
Q9BH43-1 [UniParc].

Last modified June 1, 2001. Version 1.
Checksum: C36A8CF1E84FBA87

FASTA52259,081
        10         20         30         40         50         60 
MSRWKVVILC LLSFMFEIGH ASFQCNPKTY DGAFLNIVCV CNATFCDEIE PIGEIAEGKA 

        70         80         90        100        110        120 
IVYRSSLDGD RLKRMSMKMK EKLRKNESVN VTITIDASER FQNIFGFGGA FTDSAGDQFV 

       130        140        150        160        170        180 
SLSETLQNYI VDSYFGKNGL EYNIGRVPIA SCDFSTHEYS YDDVHDDFEL KHFALPDEDL 

       190        200        210        220        230        240 
KLKIPFIKKA IEKTEGNIQL FASPWSAPGW MKVTGRMRGG GAMRNDKRVY QAYADYFFKF 

       250        260        270        280        290        300 
FEAYSSHAIT FWGLTIQNEP STGADMAWRW QTMNYTAETM RDFLKKYLGP KLKENKLTET 

       310        320        330        340        350        360 
LKVMVLDDGR GLLPGWADTI FNDPEATKYA DGVAVHWYGN LYSPAVLLDI TQRHHPTKFI 

       370        380        390        400        410        420 
FGTEACAGYA IHHGPLMGDW FTAENYASDI ISDLNHHFTG WTDWNLCLDD MGGPTWVDNF 

       430        440        450        460        470        480 
VDSPIIVNRT GQEFYKQPMF YAMGHFSKFL PRGSTRVFTK IEGNLAVSAT SVVIEGGRRA 

       490        500        510        520 
TVILSKASNS LLTRIVDSST GFSIVLNLPP RSIHTVIWKK RK 

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References

[1]"Proteomics reveals N-linked glycoprotein diversity in Caenorhabditis elegans and suggests an atypical translocation mechanism for integral membrane proteins."
Kaji H., Kamiie J., Kawakami H., Kido K., Yamauchi Y., Shinkawa T., Taoka M., Takahashi N., Isobe T.
Mol. Cell. Proteomics 6:2100-2109(2007) [PubMed: 17761667] [Abstract]
Cited for: GLYCOSYLATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY.
[2]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.

Cross-references

Sequence databases

AL031254, Z81058 Genomic DNA. Translation: CAC35807.1.
Z81058, AL031254 Genomic DNA. Translation: CAC35813.1.
RefSeqNP_503118.1.
UniGeneCel.13150

3D structure databases

HSSPHSSP built from PDB template 1OGS based on UniProtKB P04062.
ModBaseSearch...

Protein family/group databases

CAZyGH30. Glycoside Hydrolase Family 30.

Genome annotation databases

EnsemblF11E6.1. Caenorhabditis elegans. [Contig view]
GeneID178535.
KEGGcel:F11E6.1.

Organism-specific databases

WormBaseWBGene00008706. F11E6.1.
WormPepF11E6.1b. CE26698. [WorfDB]

Phylogenomic databases

OMAQ9BH43. TGTGIEY.

Gene expression databases

ArrayExpressQ9BH43.

Family and domain databases

InterProIPR001139. Glyco_hydro_30.
IPR013781. Glyco_hydro_sg_catalytic.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHERPTHR11069. Glyco_hydro_30. 1 hit.
PfamPF02055. Glyco_hydro_30. 1 hit.
[Graphical view]
PRINTSPR00843. GLHYDRLASE30.
ProtoNetSearch...

Other Resources

NextBio901518.

Entry information

Entry nameQ9BH43_CAEEL
AccessionPrimary (citable) accession number: Q9BH43
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: June 16, 2009
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information