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Protein
Submitted name:

Lymphotactin

Gene

XCL1

Organism
Bos taurus (Bovine)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-BTA-380108. Chemokine receptors bind chemokines.
R-BTA-416476. G alpha (q) signalling events.

Names & Taxonomyi

Protein namesi
Submitted name:
LymphotactinImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:XCL1Imported
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 16

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

BgeeiENSBTAG00000009938.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000013111.

Structurei

3D structure databases

SMRiQ9BDJ2. Positions 22-96.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini28 – 8457SCYInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG410IZ5E. Eukaryota.
ENOG4111C3M. LUCA.
GeneTreeiENSGT00390000005120.
HOGENOMiHOG000036685.
HOVERGENiHBG102118.
KOiK05507.
OMAiCANPEAN.
OrthoDBiEOG091G15G5.
TreeFamiTF334888.

Family and domain databases

InterProiIPR001811. Chemokine_IL8-like_dom.
IPR008105. Chemokine_XCL1.
[Graphical view]
PfamiPF00048. IL8. 1 hit.
[Graphical view]
PRINTSiPR01731. LYMPHOTACTIN.
SMARTiSM00199. SCY. 1 hit.
[Graphical view]
SUPFAMiSSF54117. SSF54117. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9BDJ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLLILTCLV ICSLAAYTVE GVGSEVLEKS ICVSLTTQRL PIKNIKTYTI
60 70 80 90
KEGSVKAVIF ITRRGFKICA DPQAAWVKKA VQKIDRKNIS QAKPTGA
Length:97
Mass (Da):10,609
Last modified:June 1, 2001 - v1
Checksum:iBCF8D47E7F301B9A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DAAA02042836 Genomic DNA. No translation available.
AF354057 mRNA. Translation: AAK26433.1.
RefSeqiNP_783647.1. NM_175716.3.
UniGeneiBt.8144.

Genome annotation databases

EnsembliENSBTAT00000013111; ENSBTAP00000013111; ENSBTAG00000009938.
GeneIDi319096.
KEGGibta:319096.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DAAA02042836 Genomic DNA. No translation available.
AF354057 mRNA. Translation: AAK26433.1.
RefSeqiNP_783647.1. NM_175716.3.
UniGeneiBt.8144.

3D structure databases

SMRiQ9BDJ2. Positions 22-96.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000013111.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSBTAT00000013111; ENSBTAP00000013111; ENSBTAG00000009938.
GeneIDi319096.
KEGGibta:319096.

Organism-specific databases

CTDi6375.

Phylogenomic databases

eggNOGiENOG410IZ5E. Eukaryota.
ENOG4111C3M. LUCA.
GeneTreeiENSGT00390000005120.
HOGENOMiHOG000036685.
HOVERGENiHBG102118.
KOiK05507.
OMAiCANPEAN.
OrthoDBiEOG091G15G5.
TreeFamiTF334888.

Enzyme and pathway databases

ReactomeiR-BTA-380108. Chemokine receptors bind chemokines.
R-BTA-416476. G alpha (q) signalling events.

Gene expression databases

BgeeiENSBTAG00000009938.

Family and domain databases

InterProiIPR001811. Chemokine_IL8-like_dom.
IPR008105. Chemokine_XCL1.
[Graphical view]
PfamiPF00048. IL8. 1 hit.
[Graphical view]
PRINTSiPR01731. LYMPHOTACTIN.
SMARTiSM00199. SCY. 1 hit.
[Graphical view]
SUPFAMiSSF54117. SSF54117. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9BDJ2_BOVIN
AccessioniPrimary (citable) accession number: Q9BDJ2
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: September 7, 2016
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.