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Protein
Submitted name:

Antifungal protein

Gene
N/A
Organism
Gastrodia elata
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Antifungal proteinImported
OrganismiGastrodia elataImported
Taxonomic identifieri91201 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaAsparagalesOrchidaceaeEpidendroideaeGastrodieaeGastrodia

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2828 PotentialImportedAdd
BLAST
Chaini29 – 179151antifungal proteinImportedPRO_5000057725Add
BLAST

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1XD5X-ray2.00A/B/C/D29-140[»]
ProteinModelPortaliQ9AXZ2.
SMRiQ9AXZ2. Positions 29-140.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9AXZ2.

Family & Domainsi

Keywords - Domaini

SignalImported

Family and domain databases

Gene3Di2.90.10.10. 1 hit.
InterProiIPR001480. Bulb-type_lectin_dom.
[Graphical view]
PfamiPF01453. B_lectin. 1 hit.
[Graphical view]
SMARTiSM00108. B_lectin. 1 hit.
[Graphical view]
SUPFAMiSSF51110. SSF51110. 1 hit.
PROSITEiPS50927. BULB_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9AXZ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAASASTAVI LFFAVTTMMS LSAIPAFASD RLNSGHQLDT GGSLAQGGYL
60 70 80 90 100
FIIQNDCNLV LYDNNRAVWA SGTNGKASGC VLKMQNDGNL VIYSGSRAIW
110 120 130 140 150
ASNTNRQNGN YYLILQRDRN VVIYDNSNNA IWATHTNVGN AEITAIPHSN
160 170
GTAAASGAAQ NKVNELYISM YSRSKRIAG
Length:179
Mass (Da):19,131
Last modified:August 30, 2005 - v2
Checksum:iB1D89F7E35B94096
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF225410 mRNA. Translation: AAG52664.2.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF225410 mRNA. Translation: AAG52664.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1XD5X-ray2.00A/B/C/D29-140[»]
ProteinModelPortaliQ9AXZ2.
SMRiQ9AXZ2. Positions 29-140.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiQ9AXZ2.

Family and domain databases

Gene3Di2.90.10.10. 1 hit.
InterProiIPR001480. Bulb-type_lectin_dom.
[Graphical view]
PfamiPF01453. B_lectin. 1 hit.
[Graphical view]
SMARTiSM00108. B_lectin. 1 hit.
[Graphical view]
SUPFAMiSSF51110. SSF51110. 1 hit.
PROSITEiPS50927. BULB_LECTIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Structural mechanism governing the quaternary organization of monocot mannose-binding lectin revealed by the novel monomeric structure of an orchid lectin."
    Liu W., Yang N., Ding J., Huang R.H., Hu Z., Wang D.C.
    J. Biol. Chem. 280:14865-14876(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 29-140, ACTIVE SITE.
  2. "Purification, in Vitro Activity and cDNA Cloning of Gastrodia Antifungal Protein (GAFP) from Gastrodia (Gastrodia elata)."
    Wang Y., Li W., Guo S.
    Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Secondary cormImported.

Entry informationi

Entry nameiQ9AXZ2_9ASPA
AccessioniPrimary (citable) accession number: Q9AXZ2
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: August 30, 2005
Last modified: January 7, 2015
This is version 48 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.