Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Phycoerythrin alpha-subunit 1

Gene

cpeA

Organism
Rhodomonas sp. (strain CS 24) (Chroomonas sp. (strain CS24))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Phycoerythrin alpha-subunit 1Imported
Gene namesi
Name:cpeAImported
OrganismiRhodomonas sp. (strain CS 24) (Chroomonas sp. (strain CS24))Imported
Taxonomic identifieri79257 [NCBI]
Taxonomic lineageiEukaryotaCryptophytaPyrenomonadalesPyrenomonadaceaeRhodomonas

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 5252 PotentialImportedAdd
BLAST
Chaini53 – 12876phycoerythrin alpha-subunit 1ImportedPRO_5000067145Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ9AVR6.
SMRiQ9AVR6. Positions 53-128.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transit peptideImported

Family and domain databases

Gene3Di3.90.510.10. 1 hit.
InterProiIPR011070. Globular_prot_asu/bsu.
IPR004228. Phycoerythr_a.
[Graphical view]
PfamiPF02972. Phycoerythr_ab. 1 hit.
[Graphical view]
ProDomiPD019398. Phycoerythr_a/b_core. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF56568. SSF56568. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9AVR6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLAKALASLA VIGSAAAYVP MMSMDMGRRE VVQAGAAAAA VTPFLSGAPA
60 70 80 90 100
GAAMDKSAKA PQITIFDHRG CSRAPKESTG AKAGGQDDEM MVKVASTKVT
110 120
VSEADAAKKL QEFITFEKGI DGPFTSKN
Length:128
Mass (Da):13,109
Last modified:June 1, 2002 - v2
Checksum:iDFB7C7D41C3423D5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ308528 Genomic DNA. Translation: CAC33091.2.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ308528 Genomic DNA. Translation: CAC33091.2.

3D structure databases

ProteinModelPortaliQ9AVR6.
SMRiQ9AVR6. Positions 53-128.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.90.510.10. 1 hit.
InterProiIPR011070. Globular_prot_asu/bsu.
IPR004228. Phycoerythr_a.
[Graphical view]
PfamiPF02972. Phycoerythr_ab. 1 hit.
[Graphical view]
ProDomiPD019398. Phycoerythr_a/b_core. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF56568. SSF56568. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Distinctive organization of genes for light-harvesting proteins in the cryptophyte alga Rhodomonas."
    Broughton M.J., Howe C.J., Hiller R.G.
    Gene 369:72-79(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CS24Imported.

Entry informationi

Entry nameiQ9AVR6_RHDS2
AccessioniPrimary (citable) accession number: Q9AVR6
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2002
Last modified: January 7, 2015
This is version 42 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.