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Q9AVR5 (Q9AVR5_RHDS2) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:cpeA EMBL CAC33092.1
OrganismRhodomonas sp. (strain CS 24) (Chroomonas sp. (strain CS24)) EMBL CAC33092.1
Taxonomic identifier79257 [NCBI]
Taxonomic lineageEukaryotaCryptophytaPyrenomonadalesPyrenomonadaceaeRhodomonas

Protein attributes

Sequence length128 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainTransit peptide EMBL CAC33092.1
Gene Ontology (GO)
   Cellular_componentphycobilisome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Transit peptide1 – 5252 Potential EMBL CAC33092.1
Chain53 – 12876phycoerythrin alpha-subunit 1 EMBL CAC33092.1
PRO_5000067147

Sequences

Sequence LengthMass (Da)Tools
Q9AVR5 [UniParc].

Last modified June 1, 2001. Version 1.
Checksum: 87C21D85A2A7C278

FASTA12813,084
        10         20         30         40         50         60 
MLAKTLASFA VIGSAAAYVP MMSMDVGRRE IVQAGAAAAA VTPFLSGAPA GAAMDKSAKA 

        70         80         90        100        110        120 
PQITIFDHRG CSRAPKESTG AKAGGQDDEM MVKVASTKVS VSEADAAKKL AEFITFEKGI 


DGPFTSKN 

« Hide

References

[1]"Distinctive organization of genes for light-harvesting proteins in the cryptophyte alga Rhodomonas."
Broughton M.J., Howe C.J., Hiller R.G.
Gene 369:72-79(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CS24 EMBL CAC33092.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ308529 Genomic DNA. Translation: CAC33092.1.

3D structure databases

ProteinModelPortalQ9AVR5.
SMRQ9AVR5. Positions 53-128.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D3.90.510.10. 1 hit.
InterProIPR011070. Globular_prot_asu/bsu.
IPR004228. Phycoerythr_a_core.
[Graphical view]
PfamPF02972. Phycoerythr_ab. 1 hit.
[Graphical view]
ProDomPD019398. Phycoerythr_a/b_core. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF56568. SSF56568. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ9AVR5_RHDS2
AccessionPrimary (citable) accession number: Q9AVR5
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: October 16, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)