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Protein
Submitted name:

MADS-box transcription factor FBP21

Gene

FBP21

Organism
Petunia hybrida (Petunia)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
MADS-box transcription factor FBP21Imported
Gene namesi
Name:FBP21Imported
OrganismiPetunia hybrida (Petunia)Imported
Taxonomic identifieri4102 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaePetunioideaePetunia

Subcellular locationi

  • Nucleus PROSITE-ProRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

IntActiQ9ATE8. 9 interactors.

Structurei

3D structure databases

ProteinModelPortaliQ9ATE8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 61MADS-boxInterPro annotationAdd BLAST61
Domaini87 – 177K-boxInterPro annotationAdd BLAST91

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili143 – 170Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

CDDicd00265. MADS_MEF2_like. 1 hit.
Gene3Di3.40.1810.10. 1 hit.
InterProiView protein in InterPro
IPR033896. MADS_MEF2-like.
IPR002487. TF_Kbox.
IPR002100. TF_MADSbox.
PfamiView protein in Pfam
PF01486. K-box. 1 hit.
PF00319. SRF-TF. 1 hit.
PRINTSiPR00404. MADSDOMAIN.
SMARTiView protein in SMART
SM00432. MADS. 1 hit.
SUPFAMiSSF55455. SSF55455. 1 hit.
PROSITEiView protein in PROSITE
PS51297. K_BOX. 1 hit.
PS00350. MADS_BOX_1. 1 hit.
PS50066. MADS_BOX_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9ATE8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVGLVIFSP
60 70 80 90 100
RGKLYEFASS CMQEIIERYK RHTKDKVQNE NQAGEQNLQL QHEAASLMKK
110 120 130 140 150
IELLEISRRR LMGEGLQSCT LQEIQQLEKQ LERSVSTIRA RKIQVFKEQI
160 170 180 190 200
ARLKEKEKIL AAENAMLKEK FGGFQERQVS SGEQVGEALC AEGNEKSDVE
210
TELFIGPPEG RIRRPSQN
Length:218
Mass (Da):24,997
Last modified:June 1, 2001 - v1
Checksum:iC7078AADCF3249F4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF335239 mRNA. Translation: AAK21252.1.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ9ATE8_PETHY
AccessioniPrimary (citable) accession number: Q9ATE8
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: July 5, 2017
This is version 70 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)