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Protein

Glutamate decarboxylase

Gene

GAD

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Name:GADImported
Synonyms:P0104B02.16-1Imported
Ordered Locus Names:Os08g0465800Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei281 – 2811N6-(pyridoxal phosphate)lysineUniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000070228.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9AQU4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVVSVAATDS DTAQPVQYST FFASRYVRDP LPRFRMPEQS IPREAAYQII
60 70 80 90 100
NDELMLDGNP RLNLASFVTT WMEPECDKLI MDSVNKNYVD MDEYPVTTEL
110 120 130 140 150
QNRCVNMIAH LFNAPIKEDE TAIGVGTVGS SEAIMLAGLA FKRKWQNKRK
160 170 180 190 200
EQGKPCDKPN IVTGANVQVC WEKFARYFEV ELKEVKLSEG YYVMDPVKAV
210 220 230 240 250
EMVDENTICV AAILGSTLTG EFEDVKLLNN LLTEKNKETG WDVPIHVDAA
260 270 280 290 300
SGGFIAPFLY PELEWDFRLP LVKSINVSGH KYGLVYPGVG WVIWRSKEDL
310 320 330 340 350
PEELIFHINY LGTDQPTFTL NFSKGSSQII AQYYQLIRLG FEGYKNIMQN
360 370 380 390 400
CMENTAILRE GIEATGRFEI LSKEAGVPLV AFSLKDSGRY TVFDISEHLR
410 420 430 440 450
RFGWIVPAYT MPANAEHVAV LRVVIREDFS RSLAERLVSD IVKILHELDA
460 470 480 490 500
HSAQVLKISS AIAKQQSGDD GVVTKKSVLE TEREIFAYWR DQVKKKQTGI

C
Length:501
Mass (Da):56,658
Last modified:June 1, 2001 - v1
Checksum:iEB4962C147FFA7A8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB056060 mRNA. Translation: BAB32868.1.
AB056062 Genomic DNA. Translation: BAB32870.1.
AP006461 Genomic DNA. Translation: BAD10770.1.
AP008214 Genomic DNA. Translation: BAF23912.1.
RefSeqiXP_015650123.1. XM_015794637.1.
UniGeneiOs.12724.

Genome annotation databases

GeneIDi4345787.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB056060 mRNA. Translation: BAB32868.1.
AB056062 Genomic DNA. Translation: BAB32870.1.
AP006461 Genomic DNA. Translation: BAD10770.1.
AP008214 Genomic DNA. Translation: BAF23912.1.
RefSeqiXP_015650123.1. XM_015794637.1.
UniGeneiOs.12724.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi4345787.

Phylogenomic databases

HOGENOMiHOG000070228.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9AQU4_ORYSJ
AccessioniPrimary (citable) accession number: Q9AQU4
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: September 7, 2016
This is version 105 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.