Q9AN16 (Q9AN16_BRAJA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Blr1993 protein EMBL BAC47258.1

Submitted name:
ID636 EMBL AAG60962.1

Gene names

Name:	id636 EMBL AAG60962.1
Ordered Locus Names:	blr1993

Organism

Bradyrhizobium japonicum EMBL AAG60962.1

Taxonomic identifier

375 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Bradyrhizobium

Protein attributes

Sequence length	510 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 28 family. RuleBase RU000404

Ontologies

Keywords
Biological process	Cell wall biogenesis/degradation RuleBase RU000404
Molecular function	Glycosidase RuleBase RU000404 Hydrolase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro cellular cell wall organization Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	polygalacturonase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9AN16 [UniParc]. Last modified June 1, 2001. Version 1. Checksum: E4565B4612E87764	FASTA	510	55,376
	10 20 30 40 50 60 MSRLTLRSCW IFVLSQNASS FSRIGKVLLR DLKSRRLLRR INVILCAPVT HAATRSSQRS 70 80 90 100 110 120 IPEKARDNDA RDKSTSRSMT KRFRNWALLS ILASMVVGPA AKAQDRRTIA EPVAPDTVCD 130 140 150 160 170 180 RPVPSGKNDT VSLQEAIEHC PDGAAVYLGR GEFHSGPLEM KSGVTLWVGR GATLIAIPEP 190 200 210 220 230 240 AAYDKGLGQC GRIAEKGDGC RPFISFSKTR GGGIYGEGII DGQGGALIGG GAETWWQLAR 250 260 270 280 290 300 RAQAQGGNQN APRLIQVDHA QDITFSGVTL RNAANFHVAM NRVEGATFWA LTIDSPADAR 310 320 330 340 350 360 NTDGIDLGAS QDVTITHSWI RTGDDNVAIK AGDNGSSSHI SIIDNYFGWG HGMSIGSEVN 370 380 390 400 410 420 SGARDILVRN LTLDGTTSGL RIKSDVGRGG LVENVTYEYV CLRGNRWPLA FDAKYDPRAQ 430 440 450 460 470 480 GTRIPVYRQI VLRHVHGDTG VLLMRGIDER HALDVTLEDV RFANSATWQL EHANVSANHS 490 500 510 DVWPPLPGRA TQPPLRGSEV CSKAFRDGNR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Potential symbiosis-specific genes uncovered by sequencing a 410-kb DNA region of the Bradyrhizobium japonicum chromosome." Goettfert M., Roethlisberger S., Kuendig C., Beck C., Marty R., Hennecke H. J. Bacteriol. 183:1405-1412(2001) [PubMed: 11157954] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: 110spc4 EMBL AAG60962.1.
[2]	"Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110." Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S., Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M., Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S. DNA Res. 9:189-197(2002) [PubMed: 12597275] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: USDA 110.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF322013 Genomic DNA. Translation: AAG60962.1. BA000040 Genomic DNA. Translation: BAC47258.1.
RefSeq	NP_768633.1. NC_004463.1.
3D structure databases
HSSP	HSSP built from PDB template 1BHE based on UniProtKB P26509.
ProteinModelPortal	Q9AN16.
ModBase	Search...
Protein family/group databases
CAZy	GH28. Glycoside Hydrolase Family 28.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1055086.
GenomeReviews	Gene locus blr1993 in contig BA000040_GR.
KEGG	bja:blr1993.
NMPDR	fig|224911.1.peg.1993.
PATRIC	21187420. VBIBraJap65052_1972.
Phylogenomic databases
HOGENOM	HBG418213.
OMA	EASPPDT.
ProtClustDB	CLSK2304715.
Family and domain databases
InterPro	IPR000743. Glyco_hydro_28. IPR006626. PbH1. IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
KO	K01184.
Pfam	PF00295. Glyco_hydro_28. 1 hit. [Graphical view]
SMART	SM00710. PbH1. 5 hits. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
PROSITE	PS00502. POLYGALACTURONASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9AN16_BRAJA

Accession

Primary (citable) accession number: Q9AN16
Secondary accession number(s): D4AF05, E7FHK0, Q79UH0

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2001
Last sequence update:	June 1, 2001
Last modified:	December 14, 2011
This is version 77 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)