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Unreviewed, UniProtKB/TrEMBL Q9ALT3 (Q9ALT3_CAMJE)

Last modified April 14, 2009. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Putative uncharacterized protein EMBL AAK12950.1
Submitted name:
    Putative uncharacterized protein orf16 EMBL ABF93252.1
Gene names
Name: orf16 EMBL ABF93252.1
OrganismCampylobacter jejuni EMBL AAK12950.1
Taxonomic identifier197 [NCBI]
Taxonomic lineageBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesCampylobacteraceaeCampylobacter

Protein attributes

Sequence length318 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

Sequences

Sequence LengthMass (Da)Tools
Q9ALT3-1 [UniParc].

Last modified June 1, 2001. Version 1.
Checksum: 1E5DE54771F642AA

FASTA31838,702
        10         20         30         40         50         60 
MNNFVLYSLY FIYSAFFLNK HRRIIKGKIL HQKEHENIAN YLENAYIKKY FENKLDDIQI 

        70         80         90        100        110        120 
KKTRNINGKK IIWQFWYQGI DNAPCIIKKC FKSVQKYKGN YEVVLLDKDN IKDYLIFPDF 

       130        140        150        160        170        180 
IYQKIDDKKF GEKTITIFSD LLRVSLLNNY GGIWLDAGMF LSGEIQKEIL DQDFFIFHRS 

       190        200        210        220        230        240 
TKKPQDYKNW INFNYNFFSW DEKFKVNIVN GFILSNKNNE IMKIMQDILI NYWKYENKLV 

       250        260        270        280        290        300 
YYFMFQILFD TLKKKYLNLN LYITNDTDIH LLQYHAKDKY SDKLWNDIKN KTSIHSLKIF 

       310 
KKIRKHSMID KILFKDTI 

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References

[1]"Characterization of the Campylobacter jejuni heptosyltransferase II gene, waaF, provides genetic evidence that extracellular polysaccharide is lipid A core independent."
Oldfield N.J., Moran A.P., Millar L.A., Prendergast M.M., Ketley J.M.
J. Bacteriol. 184:2100-2107(2002) [PubMed: 11914340] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: NCTC 11828 EMBL AAK12950.1.
[2]"Characterization of lipooligosaccharide biosynthetic loci of Campylobacter jejuni reveals 11 new LOS classes and evidence of mosaic organizations."
Parker C.T., Gilbert M., Yuki N., Endtz H.P., Mandrell R.E.
Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: RM1552 EMBL ABZ79826.1.
[3]"Sequencing of Campylobacter jejuni ZX LOS locus."
Jiang H., Zhang M., Gu Y., Zhang J.
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ZX EMBL ABF93252.1.
[4]"Structural characterization of Campylobacter jejuni lipooligosaccharide outer cores associated with Guillain-Barre and Miller Fisher syndromes."
Godschalk P.C., Kuijf M.L., Li J., St Michael F., Ang C.W., Jacobs B.C., Karwaski M.F., Brochu D., Moterassed A., Endtz H.P., van Belkum A., Gilbert M.
Infect. Immun. 75:1245-1254(2007) [PubMed: 17261613] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: GB4 EMBL AAY17581.1.

Cross-references

Sequence databases

AF343914 Genomic DNA. Translation: AAK12950.1.
AY943308 Genomic DNA. Translation: AAY17581.1.
DQ535891 Genomic DNA. Translation: ABF93252.1.
EU404105 Genomic DNA. Translation: ABZ79826.1.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGT32. Glycosyltransferase Family 32.

Family and domain databases

InterProIPR008441. Caps_polysacc_synth.
[Graphical view]
PfamPF05704. Caps_synth. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9ALT3_CAMJE
AccessionPrimary (citable) accession number: Q9ALT3
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: April 14, 2009
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Sequences · References · Cross-references · Entry information