Q9AKA7 (HLP_RICTY) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Histone-like DNA-binding protein

Gene names

Ordered Locus Names:

RT0703

Organism

Rickettsia typhi (strain ATCC VR-144 / Wilmington) [Complete proteome] [HAMAP]

Taxonomic identifier

257363 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › typhus group

Protein attributes

Sequence length	95 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the bacterial histone-like protein family.

Ontologies

Keywords
Ligand	DNA-binding
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 95	95	Histone-like DNA-binding protein		PRO_0000280390

Sequences

	Sequence		Length	Mass (Da)
	Q9AKA7 [UniParc]. Last modified June 1, 2001. Version 1. Checksum: CE51AC5C5D5C5377	FASTA	95	10,813
	10 20 30 40 50 60 MTITKNKISL MLNSKLGFSN NLCEEIVNTV FSNILEIAKV QKLTLKNFGS FEVKQKKQRP 70 80 90 GINFHTKSPV MIASKKNLRF SPSEKLKALI NKSMR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Pseudogenes, junk DNA, and the dynamics of Rickettsia genomes." Andersson J.O., Andersson S.G.E. Mol. Biol. Evol. 18:829-839(2001) [PubMed: 11319266] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: ATCC VR-144 / Wilmington.
[2]	"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae." McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. , Hong C., Yu X.-J., Walker D.H., Weinstock G.M. J. Bacteriol. 186:5842-5855(2004) [PubMed: 15317790] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC VR-144 / Wilmington.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AJ293328 Genomic DNA. Translation: CAC33761.1. AE017197 Genomic DNA. Translation: AAU04162.1.
RefSeq	YP_067644.1. NC_006142.1.
3D structure databases
HSSP	HSSP built from PDB template 1OWF based on UniProtKB P0A6X7.
ProteinModelPortal	Q9AKA7.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2959078.
GenomeReviews	Gene locus RT0703 in contig AE017197_GR.
KEGG	rty:RT0703.
PATRIC	17910654. VBIRicTyp34752_0722.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG705085.
OMA	NFHTKSP.
ProtClustDB	CLSK871045.
Enzyme and pathway databases
BioCyc	RTYP257363:RT0703-MONOMER.
Family and domain databases
InterPro	IPR023630. DNA-bd_HU/IHF. IPR000119. Hist_DNA-bd_bac. IPR010992. IHF-like_DNA-bd. [Graphical view]
Gene3D	G3DSA:4.10.520.10. Hist_DNA_bd_bac. 1 hit.
KO	K04764.
Pfam	PF00216. Bac_DNA_binding. 1 hit. [Graphical view]
SMART	SM00411. BHL. 1 hit. [Graphical view]
SUPFAM	SSF47729. IHF_like_DNA_bnd. 1 hit.
PROSITE	PS00045. HISTONE_LIKE. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

HLP_RICTY

Accession

Primary (citable) accession number: Q9AKA7

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 20, 2007
Last sequence update:	June 1, 2001
Last modified:	January 25, 2012
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program