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Q9A8M4

- Q9A8M4_CAUCR

UniProt

Q9A8M4 - Q9A8M4_CAUCR

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Protein
Submitted name: RNA polymerase sigma-70 factor, ECF subfamily
Gene
CC_1329
Organism
Caulobacter crescentus (strain ATCC 19089 / CB15)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. sequence-specific DNA binding transcription factor activity Source: InterPro
  3. sigma factor activity Source: UniProtKB-KW

GO - Biological processi

  1. DNA-templated transcription, initiation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Sigma factorSAAS annotations

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-bindingSAAS annotations

Enzyme and pathway databases

BioCyciCAULO:CC1329-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
RNA polymerase sigma-70 factor, ECF subfamilyImported
Gene namesi
Ordered Locus Names:CC_1329Imported
OrganismiCaulobacter crescentus (strain ATCC 19089 / CB15)Imported
Taxonomic identifieri190650 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaCaulobacteralesCaulobacteraceaeCaulobacter
ProteomesiUP000001816: Chromosome

Structurei

3D structure databases

ProteinModelPortaliQ9A8M4.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000152991.
KOiK03088.
OMAiYFHYFGA.
OrthoDBiEOG61S2Z2.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.25.40.10. 2 hits.
InterProiIPR011008. Dimeric_a/b-barrel.
IPR014284. RNA_pol_sigma-70_dom.
IPR007627. RNA_pol_sigma70_r2.
IPR013249. RNA_pol_sigma70_r4_t2.
IPR013325. RNA_pol_sigma_r2.
IPR013324. RNA_pol_sigma_r3_r4.
IPR011990. TPR-like_helical.
IPR011991. WHTH_DNA-bd_dom.
IPR005545. YCII.
[Graphical view]
PfamiPF04542. Sigma70_r2. 1 hit.
PF08281. Sigma70_r4_2. 1 hit.
PF03795. YCII. 1 hit.
[Graphical view]
SUPFAMiSSF54909. SSF54909. 1 hit.
SSF88659. SSF88659. 1 hit.
SSF88946. SSF88946. 1 hit.
TIGRFAMsiTIGR02937. sigma70-ECF. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9A8M4-1 [UniParc]FASTAAdd to Basket

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MLYAILCYNH EDVVCAWSKE EDAAVMEKLG VVQQRLAEEG RLGPVARLMP    50
TTAATTPAQG SRTAPGAGRS LRRDQRATAR LLRRRLRVPR WRAAGRPGSR 100
QGQSRRLLRD PSDRHVPARS RRRVTDFGWI EGAIAAARPQ AMAALLRYFR 150
DMDAAEEAFQ DACLRALKAW PKNGPPRDPT AWLIMVGRNA AIDAVRKTSR 200
NTVLPPEELL SDLEDAEAEA AERLDSSHYR DDVLRLLFIC CHPDLPATQQ 250
IALALRIVSG LSVREIARAF LVSEAAMEQR ITRAKARIGV GGAPFEAPGP 300
IERAERFAAV AAMIYLVFTE GYSASGKALE AKGGLCDEAI RLARLLLRLF 350
PSEPEMMGLT ALLLLQHSRS DARFGDDGTA ILLDDQDRSL WSRRMIDEGL 400
ALIDKAMLKK APGPYQVQAA IAALHARAAR AEDIDWAGVD RLYATLEIMQ 450
PSPVVTLNRA VATAKVWGPD AALEMIEPLG ARLDAYFHYH GARGAFLMQA 500
GRTVEARKAF DRAIALAGTA AQAANIRQYL DTMATRV 537
Length:537
Mass (Da):59,022
Last modified:June 1, 2001 - v1
Checksum:i750A2D2F566CABD6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE005673 Genomic DNA. Translation: AAK23310.1.
PIRiB87414.
RefSeqiNP_420142.1. NC_002696.2.
WP_010919206.1. NC_002696.2.

Genome annotation databases

EnsemblBacteriaiAAK23310; AAK23310; CC_1329.
GeneIDi941652.
KEGGiccr:CC_1329.
PATRICi21299672. VBICauCre124313_1358.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE005673 Genomic DNA. Translation: AAK23310.1 .
PIRi B87414.
RefSeqi NP_420142.1. NC_002696.2.
WP_010919206.1. NC_002696.2.

3D structure databases

ProteinModelPortali Q9A8M4.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAK23310 ; AAK23310 ; CC_1329 .
GeneIDi 941652.
KEGGi ccr:CC_1329.
PATRICi 21299672. VBICauCre124313_1358.

Phylogenomic databases

HOGENOMi HOG000152991.
KOi K03088.
OMAi YFHYFGA.
OrthoDBi EOG61S2Z2.

Enzyme and pathway databases

BioCyci CAULO:CC1329-MONOMER.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
1.25.40.10. 2 hits.
InterProi IPR011008. Dimeric_a/b-barrel.
IPR014284. RNA_pol_sigma-70_dom.
IPR007627. RNA_pol_sigma70_r2.
IPR013249. RNA_pol_sigma70_r4_t2.
IPR013325. RNA_pol_sigma_r2.
IPR013324. RNA_pol_sigma_r3_r4.
IPR011990. TPR-like_helical.
IPR011991. WHTH_DNA-bd_dom.
IPR005545. YCII.
[Graphical view ]
Pfami PF04542. Sigma70_r2. 1 hit.
PF08281. Sigma70_r4_2. 1 hit.
PF03795. YCII. 1 hit.
[Graphical view ]
SUPFAMi SSF54909. SSF54909. 1 hit.
SSF88659. SSF88659. 1 hit.
SSF88946. SSF88946. 1 hit.
TIGRFAMsi TIGR02937. sigma70-ECF. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 19089 / CB15.

Entry informationi

Entry nameiQ9A8M4_CAUCR
AccessioniPrimary (citable) accession number: Q9A8M4
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: September 3, 2014
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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