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Q99YS3 (Q99YS3_STRP1) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:M5005_Spy1290 EMBL AAZ51908.1, SPy_1566 EMBL AAK34353.1
OrganismStreptococcus pyogenes serotype M1 [Complete proteome] [HAMAP]
Taxonomic identifier301447 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus

Protein attributes

Sequence length242 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical term3D-structure PDB 3VZH
Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q99YS3 [UniParc].

Last modified June 1, 2001. Version 1.
Checksum: 55E499C60DB06098

FASTA24227,728
        10         20         30         40         50         60 
MYRSRDFYVR VSGQRALFTN PATKGGSERS SYSVPTRQAL NGIVDAIYYK PTFTNIVTEV 

        70         80         90        100        110        120 
KVINQIQTEL QGVRALLHDY SADLSYVSYL SDVVYLIKFH FVWNEDRKDL NSDRLPAKHE 

       130        140        150        160        170        180 
AIMERSIRKG GRRDVFLGTR ECLGLVDDIS QEEYETTVSY YNGVNIDLGI MFHSFAYPKD 

       190        200        210        220        230        240 
KKTPLKSYFT KTVMKNGVIT FKAQSECDIV NTLSSYAFKA PEEIKSVNDE CMEYDAMEKG 


EN 

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References

« Hide 'large scale' references
[1]"Complete genome sequence of an M1 strain of Streptococcus pyogenes."
Ferretti J.J., McShan W.M., Ajdic D.J., Savic D.J., Savic G., Lyon K., Primeaux C., Sezate S., Suvorov A.N., Kenton S., Lai H.S., Lin S.P., Qian Y., Jia H.G., Najar F.Z., Ren Q., Zhu H., Song L. expand/collapse author list , White J., Yuan X., Clifton S.W., Roe B.A., McLaughlin R.E.
Proc. Natl. Acad. Sci. U.S.A. 98:4658-4663(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700294 / SF370 / Serotype M1 and SF370 EMBL AAK34353.1.
[2]"Evolutionary origin and emergence of a highly successful clone of serotype M1 group A Streptococcus involved multiple horizontal gene transfer events."
Sumby P., Porcella S.F., Madrigal A.G., Barbian K.D., Virtaneva K., Ricklefs S.M., Sturdevant D.E., Graham M.R., Vuopio-Varkila J., Hoe N.P., Musser J.M.
J. Infect. Dis. 192:771-782(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-947 / MGAS5005 / Serotype M1 and MGAS5005 EMBL AAZ51908.1.
[3]"Conservation and variability in the structure and function of the Cas5d endoribonuclease in the CRISPR-mediated microbial immune system."
Koo Y., Ka D., Kim E.J., Suh N., Bae E.
J. Mol. Biol. 425:3799-3810(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS).
[4]"Evolutionary pathway to increased virulence and epidemic group A Streptococcus disease derived from 3,615 genome sequences."
Nasser W., Beres S.B., Olsen R.J., Dean M.A., Rice K.A., Long S.W., Kristinsson K.G., Gottfredsson M., Vuopio J., Raisanen K., Cauget D., Steinbakk M., Lowe D.E., McGeere A., Darenberg J., Henriques-Normark B., van Benedeng C.A., Hoffmann S., Musser J.M.
Proc. Natl. Acad. Sci. U.S.A. 111:E1768-E1776(2014) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: MGAS5005.
[5]"Evolutionary pathway to increased virulence and epidemic group A Streptococcus disease derived from 3,615 genome sequences."
Nasser W., Beres S.B., Olsen R.J., Dean M.A., Rice K.A., Long S.W., Kristinsson K.G., Gottfredsson M., Vuopio J., Raisanen K., Cauget D., Steinbakk M., Lowe D.E., McGeere A., Darenberg J., Henriques-Normark B., van Benedeng C.A., Hoffmann S., Mussera J.M.
Proc. Natl. Acad. Sci. U.S.A. 0:0-0(2014)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SF370.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE004092 Genomic DNA. Translation: AAK34353.1.
CP000017 Genomic DNA. Translation: AAZ51908.1.
RefSeqNP_269632.1. NC_002737.1.
YP_282653.1. NC_007297.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3VZHX-ray1.70A1-242[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAK34353; AAK34353; SPy_1566.
AAZ51908; AAZ51908; M5005_Spy1290.
GeneID3571603.
901815.
KEGGspy:SPy_1566.
spz:M5005_Spy_1290.
PATRIC19716608. VBIStrPyo79812_1368.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000009708.
OMASVYWKPT.
OrthoDBEOG68M4GS.

Enzyme and pathway databases

BioCycSPYO160490:GJ81-1291-MONOMER.
SPYO293653:GHFC-1349-MONOMER.

Family and domain databases

InterProIPR021124. CRISPR-assoc_prot_Cas5.
IPR013422. CRISPR-assoc_prot_Cas5_N.
IPR010155. CRISPR-assoc_prot_Cas5d-typ.
[Graphical view]
PfamPF09704. Cas_Cas5d. 1 hit.
[Graphical view]
PIRSFPIRSF029950. Cas_CT1134. 1 hit.
TIGRFAMsTIGR01876. cas_Cas5d. 1 hit.
TIGR02593. CRISPR_cas5. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ99YS3_STRP1
AccessionPrimary (citable) accession number: Q99YS3
Secondary accession number(s): Q48XL7
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: July 9, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)