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Q99NH5

- Q99NH5_RAT

UniProt

Q99NH5 - Q99NH5_RAT

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Protein
Submitted name:

GATA binding protein 3

Gene
Gata3, rCG_55727
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 5 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. core promoter proximal region sequence-specific DNA binding Source: UniProtKB
  2. E-box binding Source: UniProtKB
  3. enhancer sequence-specific DNA binding Source: Ensembl
  4. nucleic acid binding transcription factor activity Source: UniProtKB
  5. RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription Source: UniProtKB
  6. RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription Source: Ensembl
  7. RNA polymerase II core promoter sequence-specific DNA binding Source: Ensembl
  8. sequence-specific DNA binding Source: RGD
  9. sequence-specific DNA binding transcription factor activity Source: RGD
  10. transcription coactivator activity Source: UniProtKB
  11. transcription regulatory region DNA binding Source: UniProtKB
  12. zinc ion binding Source: InterPro

GO - Biological processi

  1. anatomical structure formation involved in morphogenesis Source: UniProtKB
  2. aortic valve morphogenesis Source: UniProtKB
  3. axon guidance Source: Ensembl
  4. canonical Wnt signaling pathway involved in metanephric kidney development Source: UniProtKB
  5. cardiac right ventricle morphogenesis Source: UniProtKB
  6. cell fate determination Source: UniProtKB
  7. cell maturation Source: Ensembl
  8. cellular response to BMP stimulus Source: Ensembl
  9. cellular response to interferon-alpha Source: Ensembl
  10. cellular response to interleukin-4 Source: Ensembl
  11. cellular response to tumor necrosis factor Source: Ensembl
  12. developmental growth Source: Ensembl
  13. ear development Source: UniProtKB
  14. embryonic hemopoiesis Source: Ensembl
  15. erythrocyte differentiation Source: Ensembl
  16. humoral immune response Source: Ensembl
  17. inner ear morphogenesis Source: Ensembl
  18. interferon-gamma secretion Source: Ensembl
  19. interleukin-4 secretion Source: Ensembl
  20. in utero embryonic development Source: Ensembl
  21. kidney development Source: UniProtKB
  22. lens development in camera-type eye Source: Ensembl
  23. lymphocyte migration Source: UniProtKB
  24. male gonad development Source: UniProtKB
  25. mast cell differentiation Source: Ensembl
  26. mesenchymal to epithelial transition Source: UniProtKB
  27. mesonephros development Source: UniProtKB
  28. negative regulation of cell cycle Source: UniProtKB
  29. negative regulation of cell motility Source: UniProtKB
  30. negative regulation of cell proliferation Source: UniProtKB
  31. negative regulation of cell proliferation involved in mesonephros development Source: UniProtKB
  32. negative regulation of endothelial cell apoptotic process Source: UniProtKB
  33. negative regulation of fat cell differentiation Source: UniProtKB
  34. negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation Source: UniProtKB
  35. negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation Source: UniProtKB
  36. negative regulation of inflammatory response Source: UniProtKB
  37. negative regulation of interferon-gamma production Source: Ensembl
  38. negative regulation of interleukin-2 production Source: Ensembl
  39. negative regulation of mammary gland epithelial cell proliferation Source: Ensembl
  40. negative regulation of transcription, DNA-templated Source: UniProtKB
  41. nephric duct formation Source: UniProtKB
  42. nephric duct morphogenesis Source: UniProtKB
  43. neuron migration Source: Ensembl
  44. norepinephrine biosynthetic process Source: UniProtKB
  45. otic vesicle development Source: Ensembl
  46. parathyroid gland development Source: Ensembl
  47. parathyroid hormone secretion Source: Ensembl
  48. pharyngeal system development Source: UniProtKB
  49. phosphatidylinositol 3-kinase signaling Source: UniProtKB
  50. positive regulation of endothelial cell migration Source: UniProtKB
  51. positive regulation of interleukin-13 production Source: Ensembl
  52. positive regulation of interleukin-13 secretion Source: UniProtKB
  53. positive regulation of interleukin-4 production Source: UniProtKB
  54. positive regulation of interleukin-5 production Source: Ensembl
  55. positive regulation of interleukin-5 secretion Source: UniProtKB
  56. positive regulation of protein kinase B signaling Source: UniProtKB
  57. positive regulation of signal transduction Source: UniProtKB
  58. positive regulation of T cell differentiation Source: UniProtKB
  59. positive regulation of thyroid hormone generation Source: UniProtKB
  60. positive regulation of transcription, DNA-templated Source: UniProtKB
  61. positive regulation of transcription from RNA polymerase II promoter Source: UniProtKB
  62. positive regulation of transcription regulatory region DNA binding Source: UniProtKB
  63. positive regulation of ureteric bud formation Source: UniProtKB
  64. post-embryonic development Source: Ensembl
  65. pro-T cell differentiation Source: Ensembl
  66. regulation of CD4-positive, alpha-beta T cell differentiation Source: Ensembl
  67. regulation of cellular response to X-ray Source: UniProtKB
  68. regulation of cytokine biosynthetic process Source: UniProtKB
  69. regulation of establishment of cell polarity Source: Ensembl
  70. regulation of histone H3-K27 methylation Source: Ensembl
  71. regulation of histone H3-K4 methylation Source: Ensembl
  72. regulation of nephron tubule epithelial cell differentiation Source: UniProtKB
  73. regulation of neuron apoptotic process Source: Ensembl
  74. response to drug Source: RGD
  75. response to estrogen Source: Ensembl
  76. response to ethanol Source: RGD
  77. response to gamma radiation Source: RGD
  78. response to virus Source: Ensembl
  79. signal transduction Source: UniProtKB
  80. sympathetic nervous system development Source: UniProtKB
  81. T cell receptor signaling pathway Source: UniProtKB
  82. T-helper 2 cell differentiation Source: Ensembl
  83. thymic T cell selection Source: Ensembl
  84. thymus development Source: Ensembl
  85. TOR signaling Source: UniProtKB
  86. type IV hypersensitivity Source: RGD
  87. ureteric bud formation Source: UniProtKB
  88. ureter maturation Source: Ensembl
  89. uterus development Source: UniProtKB
  90. ventricular septum development Source: UniProtKB
Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_196232. Factors involved in megakaryocyte development and platelet production.

Names & Taxonomyi

Protein namesi
Submitted name:
GATA binding protein 3Imported
Submitted name:
GATA-3Imported
Submitted name:
Protein Gata3Imported
Gene namesi
Name:Gata3Imported
ORF Names:rCG_55727Imported
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 17

Organism-specific databases

RGDi621250. Gata3.

Subcellular locationi

GO - Cellular componenti

  1. nuclear chromatin Source: UniProtKB
  2. nucleolus Source: Ensembl
  3. nucleus Source: RGD
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriQ99NH5.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000026187.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG5641.
GeneTreeiENSGT00750000117454.
HOGENOMiHOG000047701.
HOVERGENiHBG051705.
InParanoidiQ99NH5.
KOiK17895.
OMAiHGSQVCR.
OrthoDBiEOG7CCBRF.
TreeFamiTF315391.

Family and domain databases

Gene3Di3.30.50.10. 2 hits.
InterProiIPR029521. GATA-3.
IPR016374. TF_GATA-1/2/3.
IPR000679. Znf_GATA.
IPR013088. Znf_NHR/GATA.
[Graphical view]
PANTHERiPTHR10071:SF106. PTHR10071:SF106. 1 hit.
PfamiPF00320. GATA. 2 hits.
[Graphical view]
PIRSFiPIRSF003027. TF_GATA-1/2/3. 1 hit.
PRINTSiPR00619. GATAZNFINGER.
SMARTiSM00401. ZnF_GATA. 2 hits.
[Graphical view]
PROSITEiPS00344. GATA_ZN_FINGER_1. 2 hits.
PS50114. GATA_ZN_FINGER_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q99NH5-1 [UniParc]FASTAAdd to Basket

« Hide

MEVTTDQPRW VSHHHPAVLN GQHPDTHHPG LGHSYMDPAQ YPLTEEVDVL    50
FNIDGQGNHV PSYYGNSVRA TVQRYPPTHH GSQVCRPPLL HGSLPWLDGG 100
KALSSHHTAS PWNLSPFSKT SIHHGSPGPL SVYPPASSSS LAAGHSSPHL 150
FTFPPTPPKD VSPDPSLSTP GSAGSARQDE KECLKYQVQL PDSMKLETSH 200
SRGSMTTLGG ASSSAHHPIT TYPPYVPEYS SGLFPPSSLL GGSPTGFGCK 250
SRPKARSSTE GRECVNCGAT STPLWRRDGT GHYLCNACGL YHKMNGQNRP 300
LIKPKRRLSA ARRAGTSCAN CQTTTTTLWR RNANGDPVCN ACGLYYKLHN 350
INRPLTMKKE GIQTRNRKMS SKSKKCKKVH DALEDFPKSS SFNPAALSRH 400
MSSLSHISPF SHSSHMLTTP TPMHPPSGLS FGPHHPSSMV TAMG 444
Length:444
Mass (Da):48,081
Last modified:June 1, 2001 - v1
Checksum:i427384F766659388
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06092817 Genomic DNA. No translation available.
AABR06092818 Genomic DNA. No translation available.
AY024364 mRNA. Translation: AAK00586.1.
CH473990 Genomic DNA. Translation: EDL78630.1.
RefSeqiNP_579827.1. NM_133293.1.
XP_006254315.1. XM_006254253.1.
UniGeneiRn.229174.

Genome annotation databases

EnsembliENSRNOT00000026187; ENSRNOP00000026187; ENSRNOG00000019336.
GeneIDi85471.
KEGGirno:85471.
UCSCiRGD:621250. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06092817 Genomic DNA. No translation available.
AABR06092818 Genomic DNA. No translation available.
AY024364 mRNA. Translation: AAK00586.1 .
CH473990 Genomic DNA. Translation: EDL78630.1 .
RefSeqi NP_579827.1. NM_133293.1.
XP_006254315.1. XM_006254253.1.
UniGenei Rn.229174.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10116.ENSRNOP00000026187.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000026187 ; ENSRNOP00000026187 ; ENSRNOG00000019336 .
GeneIDi 85471.
KEGGi rno:85471.
UCSCi RGD:621250. rat.

Organism-specific databases

CTDi 2625.
RGDi 621250. Gata3.

Phylogenomic databases

eggNOGi COG5641.
GeneTreei ENSGT00750000117454.
HOGENOMi HOG000047701.
HOVERGENi HBG051705.
InParanoidi Q99NH5.
KOi K17895.
OMAi HGSQVCR.
OrthoDBi EOG7CCBRF.
TreeFami TF315391.

Enzyme and pathway databases

Reactomei REACT_196232. Factors involved in megakaryocyte development and platelet production.

Miscellaneous databases

NextBioi 617554.
PROi Q99NH5.

Gene expression databases

Genevestigatori Q99NH5.

Family and domain databases

Gene3Di 3.30.50.10. 2 hits.
InterProi IPR029521. GATA-3.
IPR016374. TF_GATA-1/2/3.
IPR000679. Znf_GATA.
IPR013088. Znf_NHR/GATA.
[Graphical view ]
PANTHERi PTHR10071:SF106. PTHR10071:SF106. 1 hit.
Pfami PF00320. GATA. 2 hits.
[Graphical view ]
PIRSFi PIRSF003027. TF_GATA-1/2/3. 1 hit.
PRINTSi PR00619. GATAZNFINGER.
SMARTi SM00401. ZnF_GATA. 2 hits.
[Graphical view ]
PROSITEi PS00344. GATA_ZN_FINGER_1. 2 hits.
PS50114. GATA_ZN_FINGER_2. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Complete coding sequence of the rat GATA-3 gene."
    Kaufman M., Bisotto S., Fixman E.D.
    Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  5. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiQ99NH5_RAT
AccessioniPrimary (citable) accession number: Q99NH5
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: September 3, 2014
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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