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Protein
Submitted name:

GATA binding protein 3

Gene

Gata3

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-RNO-983231. Factors involved in megakaryocyte development and platelet production.

Names & Taxonomyi

Protein namesi
Submitted name:
GATA binding protein 3Imported
Submitted name:
GATA-3Imported
Submitted name:
Protein Gata3Imported
Gene namesi
Name:Gata3Imported
ORF Names:rCG_55727Imported
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 17

Organism-specific databases

RGDi621250. Gata3.

Subcellular locationi

GO - Cellular componenti

  • nuclear chromatin Source: UniProtKB
  • nucleolus Source: Ensembl
  • nucleus Source: RGD
  • transcription factor complex Source: GO_Central
Complete GO annotation...

PTM / Processingi

PTM databases

PhosphoSiteiQ99NH5.

Expressioni

Gene expression databases

BgeeiENSRNOG00000019336.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000026187.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini258 – 31255GATA-typeInterPro annotationAdd
BLAST
Domaini312 – 36554GATA-typeInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1601. Eukaryota.
COG5641. LUCA.
GeneTreeiENSGT00760000119221.
HOGENOMiHOG000047701.
HOVERGENiHBG051705.
KOiK17895.
OMAiQRYPPTH.
OrthoDBiEOG091G0AUR.
TreeFamiTF315391.

Family and domain databases

Gene3Di3.30.50.10. 2 hits.
InterProiIPR029521. GATA-3.
IPR016374. TF_GATA-2/3.
IPR000679. Znf_GATA.
IPR013088. Znf_NHR/GATA.
[Graphical view]
PANTHERiPTHR10071:SF106. PTHR10071:SF106. 1 hit.
PfamiPF00320. GATA. 2 hits.
[Graphical view]
PIRSFiPIRSF003027. TF_GATA-1/2/3. 1 hit.
PRINTSiPR00619. GATAZNFINGER.
SMARTiSM00401. ZnF_GATA. 2 hits.
[Graphical view]
PROSITEiPS00344. GATA_ZN_FINGER_1. 2 hits.
PS50114. GATA_ZN_FINGER_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q99NH5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEVTTDQPRW VSHHHPAVLN GQHPDTHHPG LGHSYMDPAQ YPLTEEVDVL
60 70 80 90 100
FNIDGQGNHV PSYYGNSVRA TVQRYPPTHH GSQVCRPPLL HGSLPWLDGG
110 120 130 140 150
KALSSHHTAS PWNLSPFSKT SIHHGSPGPL SVYPPASSSS LAAGHSSPHL
160 170 180 190 200
FTFPPTPPKD VSPDPSLSTP GSAGSARQDE KECLKYQVQL PDSMKLETSH
210 220 230 240 250
SRGSMTTLGG ASSSAHHPIT TYPPYVPEYS SGLFPPSSLL GGSPTGFGCK
260 270 280 290 300
SRPKARSSTE GRECVNCGAT STPLWRRDGT GHYLCNACGL YHKMNGQNRP
310 320 330 340 350
LIKPKRRLSA ARRAGTSCAN CQTTTTTLWR RNANGDPVCN ACGLYYKLHN
360 370 380 390 400
INRPLTMKKE GIQTRNRKMS SKSKKCKKVH DALEDFPKSS SFNPAALSRH
410 420 430 440
MSSLSHISPF SHSSHMLTTP TPMHPPSGLS FGPHHPSSMV TAMG
Length:444
Mass (Da):48,081
Last modified:June 1, 2001 - v1
Checksum:i427384F766659388
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07028502 Genomic DNA. No translation available.
AY024364 mRNA. Translation: AAK00586.1.
CH473990 Genomic DNA. Translation: EDL78630.1.
RefSeqiNP_579827.1. NM_133293.1.
XP_006254315.1. XM_006254253.2.
XP_008770115.1. XM_008771893.1.
XP_008770116.1. XM_008771894.1.
UniGeneiRn.229174.

Genome annotation databases

EnsembliENSRNOT00000026187; ENSRNOP00000026187; ENSRNOG00000019336.
GeneIDi85471.
KEGGirno:85471.
UCSCiRGD:621250. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07028502 Genomic DNA. No translation available.
AY024364 mRNA. Translation: AAK00586.1.
CH473990 Genomic DNA. Translation: EDL78630.1.
RefSeqiNP_579827.1. NM_133293.1.
XP_006254315.1. XM_006254253.2.
XP_008770115.1. XM_008771893.1.
XP_008770116.1. XM_008771894.1.
UniGeneiRn.229174.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000026187.

PTM databases

PhosphoSiteiQ99NH5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000026187; ENSRNOP00000026187; ENSRNOG00000019336.
GeneIDi85471.
KEGGirno:85471.
UCSCiRGD:621250. rat.

Organism-specific databases

CTDi2625.
RGDi621250. Gata3.

Phylogenomic databases

eggNOGiKOG1601. Eukaryota.
COG5641. LUCA.
GeneTreeiENSGT00760000119221.
HOGENOMiHOG000047701.
HOVERGENiHBG051705.
KOiK17895.
OMAiQRYPPTH.
OrthoDBiEOG091G0AUR.
TreeFamiTF315391.

Enzyme and pathway databases

ReactomeiR-RNO-983231. Factors involved in megakaryocyte development and platelet production.

Gene expression databases

BgeeiENSRNOG00000019336.

Family and domain databases

Gene3Di3.30.50.10. 2 hits.
InterProiIPR029521. GATA-3.
IPR016374. TF_GATA-2/3.
IPR000679. Znf_GATA.
IPR013088. Znf_NHR/GATA.
[Graphical view]
PANTHERiPTHR10071:SF106. PTHR10071:SF106. 1 hit.
PfamiPF00320. GATA. 2 hits.
[Graphical view]
PIRSFiPIRSF003027. TF_GATA-1/2/3. 1 hit.
PRINTSiPR00619. GATAZNFINGER.
SMARTiSM00401. ZnF_GATA. 2 hits.
[Graphical view]
PROSITEiPS00344. GATA_ZN_FINGER_1. 2 hits.
PS50114. GATA_ZN_FINGER_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ99NH5_RAT
AccessioniPrimary (citable) accession number: Q99NH5
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: September 7, 2016
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.