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Protein
Submitted name:

NAD+-specific isocitrate dehydrogenase b-subunit

Gene

Idh3B

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
NAD+-specific isocitrate dehydrogenase b-subunitImported
Gene namesi
Name:Idh3BImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi621881. Idh3B.

PTM / Processingi

Proteomic databases

PaxDbiQ99NA6.
PRIDEiQ99NA6.

Expressioni

Gene expression databases

BgeeiENSRNOG00000007316.

Interactioni

Protein-protein interaction databases

IntActiQ99NA6. 1 interactor.
STRINGi10116.ENSRNOP00000009681.

Structurei

3D structure databases

ProteinModelPortaliQ99NA6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 136Iso_dhInterPro annotationAdd BLAST136

Phylogenomic databases

eggNOGiKOG0784. Eukaryota.
COG0473. LUCA.
HOVERGENiHBG052080.

Family and domain databases

Gene3Di3.40.718.10. 1 hit.
InterProiView protein in InterPro
IPR019818. IsoCit/isopropylmalate_DH_CS.
IPR024084. IsoPropMal-DH-like_dom.
PfamiView protein in Pfam
PF00180. Iso_dh. 1 hit.
SMARTiView protein in SMART
SM01329. Iso_dh. 1 hit.
PROSITEiView protein in PROSITE
PS00470. IDH_IMDH. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q99NA6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
PKIKFETMII DNCCMQLVQN PYQFDVLVMP NLYGNIIDNL AAGLVGGAGV
60 70 80 90 100
VPGESYSAEY AVFETGARHP FAQAVGRNIA NPTAMLLSAS NMLRHLNLEY
110 120 130 140
HSSMIADAVK KVIKVGKVRT RDMGGYSTTT DFIKSVIGHL HPHGG
Length:145
Mass (Da):15,706
Last modified:June 1, 2001 - v1
Checksum:i7E14F1AF6A0FD452
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB047540 mRNA. Translation: BAB32674.1.
UniGeneiRn.1093.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB047540 mRNA. Translation: BAB32674.1.
UniGeneiRn.1093.

3D structure databases

ProteinModelPortaliQ99NA6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ99NA6. 1 interactor.
STRINGi10116.ENSRNOP00000009681.

Proteomic databases

PaxDbiQ99NA6.
PRIDEiQ99NA6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

RGDi621881. Idh3B.

Phylogenomic databases

eggNOGiKOG0784. Eukaryota.
COG0473. LUCA.
HOVERGENiHBG052080.

Gene expression databases

BgeeiENSRNOG00000007316.

Family and domain databases

Gene3Di3.40.718.10. 1 hit.
InterProiView protein in InterPro
IPR019818. IsoCit/isopropylmalate_DH_CS.
IPR024084. IsoPropMal-DH-like_dom.
PfamiView protein in Pfam
PF00180. Iso_dh. 1 hit.
SMARTiView protein in SMART
SM01329. Iso_dh. 1 hit.
PROSITEiView protein in PROSITE
PS00470. IDH_IMDH. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ99NA6_RAT
AccessioniPrimary (citable) accession number: Q99NA6
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: February 15, 2017
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.