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Protein
Submitted name:

Protein Sval2

Gene

Sval2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Sval2Imported
Submitted name:
SVA like proteinImported
Submitted name:
SVA-like proteinImported
Submitted name:
Seminal vesicle antigen-like 2, isoform CRA_bImported
Gene namesi
Name:Sval2Imported
Synonyms:rSLP-MImported
ORF Names:rCG_28242Imported
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 4

Organism-specific databases

RGDi620869. Sval2.

Subcellular locationi

GO - Cellular componenti

  1. extracellular region Source: InterPro
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriQ99N74.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000021668.

Structurei

3D structure databases

ProteinModelPortaliQ99N74.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00730000111926.
HOGENOMiHOG000132916.
HOVERGENiHBG097456.
OMAiHAIYTSC.
OrthoDBiEOG7VMP7F.
TreeFamiTF336919.

Family and domain databases

InterProiIPR014756. Ig_E-set.
IPR007990. PIP.
[Graphical view]
PfamiPF05326. SVA. 1 hit.
[Graphical view]
PIRSFiPIRSF002572. PIP-GCDFP-15. 1 hit.
ProDomiPD021604. SV_autoAg. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF81296. SSF81296. 1 hit.

Sequencei

Sequence statusi: Complete.

Q99N74-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MASLQMFYQP RAAMHLLILC LFLETAYGQD IWSNPLSLEL IVSPLKKANE
60 70 80 90 100
FTVTLQVKNN VDQCMAVKVS TVSNPNIKYI SSHAIYTSCL CDVNNYFWDI
110 120 130 140
QVIANTALQG KAEVVPAKDI CPNDENIFPV TSYIGTATQK IFVS
Length:144
Mass (Da):16,055
Last modified:June 1, 2001 - v1
Checksum:i13F1FD91C39B42E6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06030695 Genomic DNA. No translation available.
AB052618 Genomic DNA. Translation: BAB39398.1.
AB051831 mRNA. Translation: BAB56109.1.
CH473959 Genomic DNA. Translation: EDM15497.1.
PIRiJC7611.
RefSeqiNP_579825.1. NM_133291.1.
UniGeneiRn.74250.

Genome annotation databases

EnsembliENSRNOT00000021986; ENSRNOP00000021668; ENSRNOG00000025541.
GeneIDi84605.
KEGGirno:84605.
UCSCiRGD:620869. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06030695 Genomic DNA. No translation available.
AB052618 Genomic DNA. Translation: BAB39398.1.
AB051831 mRNA. Translation: BAB56109.1.
CH473959 Genomic DNA. Translation: EDM15497.1.
PIRiJC7611.
RefSeqiNP_579825.1. NM_133291.1.
UniGeneiRn.74250.

3D structure databases

ProteinModelPortaliQ99N74.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000021668.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000021986; ENSRNOP00000021668; ENSRNOG00000025541.
GeneIDi84605.
KEGGirno:84605.
UCSCiRGD:620869. rat.

Organism-specific databases

CTDi84543.
RGDi620869. Sval2.

Phylogenomic databases

GeneTreeiENSGT00730000111926.
HOGENOMiHOG000132916.
HOVERGENiHBG097456.
OMAiHAIYTSC.
OrthoDBiEOG7VMP7F.
TreeFamiTF336919.

Miscellaneous databases

NextBioi617248.

Gene expression databases

GenevestigatoriQ99N74.

Family and domain databases

InterProiIPR014756. Ig_E-set.
IPR007990. PIP.
[Graphical view]
PfamiPF05326. SVA. 1 hit.
[Graphical view]
PIRSFiPIRSF002572. PIP-GCDFP-15. 1 hit.
ProDomiPD021604. SV_autoAg. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF81296. SSF81296. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Cloning and Characterization of Four Genes Encoding Homologues to Seminal Vesicle Autoantigen in Rodents."
    Yoshida M., Kaneko M., Osawa M., Saito H., Kurachi H.
    Submitted (NOV-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Mammary glandImported.
  2. "Identification of two rodent genes encoding homologues to seminal vesicle autoantigen: a gene family including the gene for prolactin-inducible protein."
    Yoshida M., Kaneko M., Kurachi H., Osawa M.
    Biochem. Biophys. Res. Commun. 281:94-100(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: LiverImported.
  3. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  5. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  6. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiQ99N74_RAT
AccessioniPrimary (citable) accession number: Q99N74
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2001
Last sequence update: June 1, 2001
Last modified: February 4, 2015
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.