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Q99N74

- Q99N74_RAT

UniProt

Q99N74 - Q99N74_RAT

Protein
Submitted name:

Protein Sval2

Gene

Sval2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
  1. Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Sval2Imported
    Submitted name:
    SVA like proteinImported
    Submitted name:
    SVA-like proteinImported
    Submitted name:
    Seminal vesicle antigen-like 2, isoform CRA_bImported
    Gene namesi
    Name:Sval2Imported
    Synonyms:rSLP-MImported
    ORF Names:rCG_28242Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 4

    Organism-specific databases

    RGDi620869. Sval2.

    Subcellular locationi

    GO - Cellular componenti

    1. extracellular region Source: InterPro

    Expressioni

    Gene expression databases

    GenevestigatoriQ99N74.

    Interactioni

    Protein-protein interaction databases

    STRINGi10116.ENSRNOP00000021668.

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00730000111926.
    HOGENOMiHOG000132916.
    HOVERGENiHBG097456.
    InParanoidiQ99N74.
    OMAiPNDENIF.
    OrthoDBiEOG7VMP7F.
    TreeFamiTF336919.

    Family and domain databases

    InterProiIPR014756. Ig_E-set.
    IPR007990. SV_autoAg.
    [Graphical view]
    PANTHERiPTHR15096. PTHR15096. 1 hit.
    PfamiPF05326. SVA. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002572. PIP-GCDFP-15. 1 hit.
    ProDomiPD021604. SV_autoAg. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF81296. SSF81296. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q99N74-1 [UniParc]FASTAAdd to Basket

    « Hide

    MASLQMFYQP RAAMHLLILC LFLETAYGQD IWSNPLSLEL IVSPLKKANE    50
    FTVTLQVKNN VDQCMAVKVS TVSNPNIKYI SSHAIYTSCL CDVNNYFWDI 100
    QVIANTALQG KAEVVPAKDI CPNDENIFPV TSYIGTATQK IFVS 144
    Length:144
    Mass (Da):16,055
    Last modified:June 1, 2001 - v1
    Checksum:i13F1FD91C39B42E6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06030695 Genomic DNA. No translation available.
    AB052618 Genomic DNA. Translation: BAB39398.1.
    AB051831 mRNA. Translation: BAB56109.1.
    CH473959 Genomic DNA. Translation: EDM15497.1.
    PIRiJC7611.
    RefSeqiNP_579825.1. NM_133291.1.
    UniGeneiRn.74250.

    Genome annotation databases

    EnsembliENSRNOT00000021986; ENSRNOP00000021668; ENSRNOG00000025541.
    GeneIDi84605.
    KEGGirno:84605.
    UCSCiRGD:620869. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06030695 Genomic DNA. No translation available.
    AB052618 Genomic DNA. Translation: BAB39398.1 .
    AB051831 mRNA. Translation: BAB56109.1 .
    CH473959 Genomic DNA. Translation: EDM15497.1 .
    PIRi JC7611.
    RefSeqi NP_579825.1. NM_133291.1.
    UniGenei Rn.74250.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10116.ENSRNOP00000021668.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000021986 ; ENSRNOP00000021668 ; ENSRNOG00000025541 .
    GeneIDi 84605.
    KEGGi rno:84605.
    UCSCi RGD:620869. rat.

    Organism-specific databases

    CTDi 84543.
    RGDi 620869. Sval2.

    Phylogenomic databases

    GeneTreei ENSGT00730000111926.
    HOGENOMi HOG000132916.
    HOVERGENi HBG097456.
    InParanoidi Q99N74.
    OMAi PNDENIF.
    OrthoDBi EOG7VMP7F.
    TreeFami TF336919.

    Miscellaneous databases

    NextBioi 617248.

    Gene expression databases

    Genevestigatori Q99N74.

    Family and domain databases

    InterProi IPR014756. Ig_E-set.
    IPR007990. SV_autoAg.
    [Graphical view ]
    PANTHERi PTHR15096. PTHR15096. 1 hit.
    Pfami PF05326. SVA. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002572. PIP-GCDFP-15. 1 hit.
    ProDomi PD021604. SV_autoAg. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF81296. SSF81296. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Cloning and Characterization of Four Genes Encoding Homologues to Seminal Vesicle Autoantigen in Rodents."
      Yoshida M., Kaneko M., Osawa M., Saito H., Kurachi H.
      Submitted (NOV-2000) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: Mammary glandImported.
    2. "Identification of two rodent genes encoding homologues to seminal vesicle autoantigen: a gene family including the gene for prolactin-inducible protein."
      Yoshida M., Kaneko M., Kurachi H., Osawa M.
      Biochem. Biophys. Res. Commun. 281:94-100(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: LiverImported.
    3. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    4. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    5. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    6. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiQ99N74_RAT
    AccessioniPrimary (citable) accession number: Q99N74
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 2001
    Last sequence update: June 1, 2001
    Last modified: October 1, 2014
    This is version 67 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3